CF810888 | GDV

EST Overview


Name	CF810888
Unique Name	CF810888
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	663

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18
KEGG analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CF810888 vs. DB:swissprot:display
Match: NPL42_ARATH (NPL4-like protein 2 OS=Arabidopsis thaliana GN=At2g47970 PE=1 SV=1)

HSP 1 Score: 244.588 bits (623), Expect = 4.319e-68
Identity = 120/186 (64.52%), Postives = 149/186 (80.11%), Query Frame = 3

Query:   27 LTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAG-PQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            +T++QLK+ I  QL++P+             AKTP+D+  FTD+T+P   +S+L + HGSM+YL+Y+G+R++ G P   PAGSFGRKMT+DDLIA+QMRVTRQE  +C+ VSFDRDAANAFQ+YVNESLAFAVKRGG MYGTV+ EG+VEVDFIYEPPQQGTE  LIL+RD DEEK V+AIAMGLG
Sbjct:   22 ITVSQLKTLIADQLQIPLHKQTLSTNRDLLLAKTPADLLAFTDLTDPNLPLSSLNLGHGSMLYLAYDGERSIPGAPPVTPAGSFGRKMTVDDLIARQMRVTRQETSHCDSVSFDRDAANAFQHYVNESLAFAVKRGGFMYGTVTEEGQVEVDFIYEPPQQGTEANLILMRDADEEKRVDAIAMGLG 207

HSP 2 Score: 35.039 bits (79), Expect = 4.319e-68
Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRKDYTM 645
            G GMR+VGFIF QT+ Q + +YT+
Sbjct:  205 GLGMRRVGFIFNQTVVQDKTEYTL 228

[Close]

BLAST of CF810888 vs. DB:swissprot:display
Match: NPL41_ARATH (NPL4-like protein 1 OS=Arabidopsis thaliana GN=At3g63000 PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 6.142e-67
Identity = 117/188 (62.23%), Postives = 147/188 (78.19%), Query Frame = 3

Query:   21 PSLTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTV-AGPQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            P +T++QLK+ I+ QL++PI             AK+PSD   FTDM +P   IS+L +AHGSM+YL+YEG+RT+  GP   PAGSFGRKMT++DLIA+QMRV RQE  +C+ VSFDRD ANAFQ++VNESLAFAVKRGG MYG VS +G+VEV+FIYEPPQQG E+ LIL+RD +EEK V+AIA+GLG
Sbjct:   20 PHITVSQLKTLIQDQLQIPIHNQTLSTNRNLLLAKSPSDFLAFTDMADPNLRISSLNLAHGSMVYLAYEGERTIRGGPAVTPAGSFGRKMTVEDLIARQMRVGRQEKAHCDSVSFDRDCANAFQHFVNESLAFAVKRGGFMYGNVSEDGQVEVNFIYEPPQQGMEDNLILMRDSEEEKRVDAIALGLG 207

HSP 2 Score: 37.7354 bits (86), Expect = 6.142e-67
Identity = 15/24 (62.50%), Postives = 20/24 (83.33%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRKDYTM 645
            G GMR+VGFIF QT+ Q +K+YT+
Sbjct:  205 GLGMRRVGFIFNQTVTQDKKEYTL 228

[Close]

BLAST of CF810888 vs. DB:swissprot:display
Match: NPL4_ORYSJ (NPL4-like protein OS=Oryza sativa subsp. japonica GN=Os01g0377700 PE=2 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.226e-41
Identity = 94/195 (48.21%), Postives = 123/195 (63.08%), Query Frame = 3

Query:   15 PNPSL-TIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAGPQ----FNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGK-VEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            P+P+  T+  L+  I +++ VP+P               PS  S    + +P   +S+L +++GS +YLSY      + P      + AGSFG+KMTMDDLIA+Q+RVTRQE P C   SFDRD+ANAFQ +V ESLAFA KR G +YG V  + K V VDFIYEPPQ GTE+V+ L+RD  EE  V+AIA GLG
Sbjct:   17 PDPAAATVGDLQRLIAARVTVPVPLQRLSLDPALLL---PSSASAAL-LADPAAPLSSLRLSNGSFVYLSYPPDARSSQPPPPKALSAAGSFGKKMTMDDLIARQIRVTRQEAPLCAAASFDRDSANAFQLHVAESLAFATKRAGFLYGRVDADTKEVFVDFIYEPPQVGTEDVVQLMRDAQEEARVDAIAHGLG 207

HSP 2 Score: 30.8018 bits (68), Expect = 2.226e-41
Identity = 14/27 (51.85%), Postives = 18/27 (66.67%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRKD---YTM 645
            G GMR+VG +FTQ +G+   D   YTM
Sbjct:  205 GLGMRRVGLVFTQAVGRKTSDTGEYTM 231

[Close]

BLAST of CF810888 vs. DB:swissprot:display
Match: NPL4_DICDI (Nuclear protein localization protein 4 homolog OS=Dictyostelium discoideum GN=nploc4 PE=3 SV=1)

HSP 1 Score: 55.0694 bits (131), Expect = 3.918e-7
Identity = 34/91 (37.36%), Postives = 52/91 (57.14%), Query Frame = 3

Query:  312 QMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQ-GTEEVLILLRDPDEEKLVEAIAMGLG 581
            +MR+  Q+NP+      D  +AN FQ Y+  S  +  +R G ++G    +G V VD IYEPPQ+   ++   LL DP  +K +E++A  LG
Sbjct:  282 KMRLKSQDNPHAPGALVDFQSANIFQQYIANS-KYEQQRIGFLFGNFLSDGSVVVDSIYEPPQECKDKQTPTLLPDPLADK-IESMASMLG 370

[Close]

BLAST of CF810888 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s22770.1 ()

HSP 1 Score: 270.781 bits (691), Expect = 3.006e-78
Identity = 134/193 (69.43%), Postives = 161/193 (83.42%), Query Frame = 3

Query:    3 TIDNPNPSLTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAGPQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            +IDN N  +T++QLK+ I++QL++PI             AK+PSD+ KFTDM+NP T +S+L I+HGS+I+L+Y+G+RT+AGP   PAGSFGRKMT+DDLIAKQMRVTRQENP+C+ VSFDRD ANAFQ+YVNE+LAFAVKRGG MYGTVS EGKVEVDFIYEPPQQGTEEVL+LLRD DEEKLVEAI   LG
Sbjct:   16 SIDNTN--ITVSQLKTLIQNQLQIPIRSQTLSTNQSLLLAKSPSDLLKFTDMSNPDTPLSSLSISHGSLIFLAYDGERTIAGPAVRPAGSFGRKMTIDDLIAKQMRVTRQENPHCDSVSFDRDCANAFQHYVNETLAFAVKRGGFMYGTVSEEGKVEVDFIYEPPQQGTEEVLMLLRDSDEEKLVEAITACLG 206

HSP 2 Score: 39.6614 bits (91), Expect = 3.006e-78
Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 1

Query:  580 GMRKVGFIFTQTIGQXRKDYTM 645
            GMR+VGFIFTQTI Q +KDYT+
Sbjct:  206 GMRRVGFIFTQTIMQDKKDYTL 227

[Close]

BLAST of CF810888 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s13120.1 ()

HSP 1 Score: 268.085 bits (684), Expect = 9.494e-77
Identity = 132/193 (68.39%), Postives = 161/193 (83.42%), Query Frame = 3

Query:    3 TIDNPNPSLTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAGPQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            +IDNPN  +TI+Q K+ I++QL++PI             AK+P D+ +FTDM+NP TL+S+L I+HGS+I+L+YEG RT+AGP  +PAGSFGRKMTMDDLIAKQMRV RQENP+C+ VSFDRD ANAFQ+YVNE+LAFAVKRGG MYGTVS EGKVEV+FIYE PQQGTEE+L+LLRD DEEK+V+AIA GLG
Sbjct:   15 SIDNPN--ITISQFKTLIQNQLQIPIHNQTLSTNQNLLLAKSPPDLLQFTDMSNPSTLLSSLNISHGSIIFLAYEGHRTIAGPAVHPAGSFGRKMTMDDLIAKQMRVGRQENPHCDSVSFDRDCANAFQHYVNETLAFAVKRGGFMYGTVSEEGKVEVNFIYELPQQGTEEILMLLRDSDEEKIVDAIAAGLG 205

HSP 2 Score: 37.3502 bits (85), Expect = 9.494e-77
Identity = 16/24 (66.67%), Postives = 19/24 (79.17%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRKDYTM 645
            G GMR+VGFIF QTI   +KDYT+
Sbjct:  203 GLGMRRVGFIFNQTIMHDKKDYTL 226

[Close]

BLAST of CF810888 vs. P. persica 1.0 peptide
Match: ppa006427m ()

HSP 1 Score: 272.322 bits (695), Expect = 1.293e-73
Identity = 135/211 (63.98%), Postives = 166/211 (78.67%), Query Frame = 3

Query:    3 TIDNPNPSLTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAGPQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLGNEESRVYIYSDDWSEXKR 635
            T+DNP  + T++QLK+ I++QLR+P              AKT  D+S+FTDM NP T +S L ++HGS++YL+Y+G+RTVAGP F+PAGSFGRKMTMDDLIAKQM+VTRQENP+ E+VSFDRD ANAFQ+YVN++LAFAVKRGG MYGTVS EGKVEVDFIYEPPQQGTE  L+  RDPDEEK VEAIAMGLG      +I++   S+ K+
Sbjct:   15 TVDNPQHT-TVSQLKALIQTQLRIPFQNQTISTNQNLLLAKTHDDISRFTDMANPNTPLSALNLSHGSIVYLAYDGERTVAGPTFHPAGSFGRKMTMDDLIAKQMKVTRQENPHSELVSFDRDCANAFQHYVNDTLAFAVKRGGFMYGTVSEEGKVEVDFIYEPPQQGTEANLVFFRDPDEEKSVEAIAMGLGMRRVG-FIFTQTVSQDKK 223

[Close]

BLAST of CF810888 vs. TrEMBL
Match: A9PCA9|A9PCA9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_552641 PE=2 SV=1)

HSP 1 Score: 270.781 bits (691), Expect = 3.747e-76
Identity = 134/193 (69.43%), Postives = 161/193 (83.42%), Query Frame = 3

Query:    3 TIDNPNPSLTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAGPQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            +IDN N  +T++QLK+ I++QL++PI             AK+PSD+ KFTDM+NP T +S+L I+HGS+I+L+Y+G+RT+AGP   PAGSFGRKMT+DDLIAKQMRVTRQENP+C+ VSFDRD ANAFQ+YVNE+LAFAVKRGG MYGTVS EGKVEVDFIYEPPQQGTEEVL+LLRD DEEKLVEAI   LG
Sbjct:   16 SIDNTN--ITVSQLKTLIQNQLQIPIRSQTLSTNQSLLLAKSPSDLLKFTDMSNPDTPLSSLSISHGSLIFLAYDGERTIAGPAVRPAGSFGRKMTIDDLIAKQMRVTRQENPHCDSVSFDRDCANAFQHYVNETLAFAVKRGGFMYGTVSEEGKVEVDFIYEPPQQGTEEVLMLLRDSDEEKLVEAITACLG 206

HSP 2 Score: 39.6614 bits (91), Expect = 3.747e-76
Identity = 17/22 (77.27%), Postives = 20/22 (90.91%), Query Frame = 1

Query:  580 GMRKVGFIFTQTIGQXRKDYTM 645
            GMR+VGFIFTQTI Q +KDYT+
Sbjct:  206 GMRRVGFIFTQTIMQDKKDYTL 227

[Close]

BLAST of CF810888 vs. TrEMBL
Match: A5BEN5|A5BEN5_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_016664 PE=4 SV=1)

HSP 1 Score: 267.314 bits (682), Expect = 1.402e-75
Identity = 130/193 (67.36%), Postives = 159/193 (82.38%), Query Frame = 3

Query:    3 TIDNPNPSLTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAGPQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            T+DNP+   TI+QLK+ I+  L +PI             AKTPSD+++FTDM++PQT I+ LG+ HGS++YL+++ QRTV+GP F+PAGSFGR+MTMDDLIAKQMRVTRQE P+CE VSFDRDAANAFQ+YVNE+L FAVKRGG MYGTV+ +G V VDFIYEPPQQGTEE LIL+RD DEE+LV+AIAMGLG
Sbjct:   15 TLDNPHA--TISQLKTLIQQHLHIPISSQTLSTNQNLLLAKTPSDIARFTDMSDPQTPIAALGVTHGSIVYLAHDTQRTVSGPTFSPAGSFGRRMTMDDLIAKQMRVTRQETPHCESVSFDRDAANAFQHYVNETLVFAVKRGGFMYGTVADDGAVRVDFIYEPPQQGTEENLILMRDTDEERLVDAIAMGLG 205

HSP 2 Score: 41.2022 bits (95), Expect = 1.402e-75
Identity = 18/24 (75.00%), Postives = 20/24 (83.33%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRKDYTM 645
            G GM +VGFIFTQTI Q +KDYTM
Sbjct:  203 GLGMXRVGFIFTQTISQNKKDYTM 226

[Close]

BLAST of CF810888 vs. TrEMBL
Match: B9I9Y7|B9I9Y7_POPTR (Predicted protein (Fragment) OS=Populus trichocarpa GN=POPTRDRAFT_731936 PE=4 SV=1)

HSP 1 Score: 268.085 bits (684), Expect = 1.186e-74
Identity = 132/193 (68.39%), Postives = 161/193 (83.42%), Query Frame = 3

Query:    3 TIDNPNPSLTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAGPQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            +IDNPN  +TI+Q K+ I++QL++PI             AK+P D+ +FTDM+NP TL+S+L I+HGS+I+L+YEG RT+AGP  +PAGSFGRKMTMDDLIAKQMRV RQENP+C+ VSFDRD ANAFQ+YVNE+LAFAVKRGG MYGTVS EGKVEV+FIYE PQQGTEE+L+LLRD DEEK+V+AIA GLG
Sbjct:   15 SIDNPN--ITISQFKTLIQNQLQIPIHNQTLSTNQNLLLAKSPPDLLQFTDMSNPSTLLSSLNISHGSIIFLAYEGHRTIAGPAVHPAGSFGRKMTMDDLIAKQMRVGRQENPHCDSVSFDRDCANAFQHYVNETLAFAVKRGGFMYGTVSEEGKVEVNFIYELPQQGTEEILMLLRDSDEEKIVDAIAAGLG 205

HSP 2 Score: 37.3502 bits (85), Expect = 1.186e-74
Identity = 16/24 (66.67%), Postives = 19/24 (79.17%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRKDYTM 645
            G GMR+VGFIF QTI   +KDYT+
Sbjct:  203 GLGMRRVGFIFNQTIMHDKKDYTL 226

[Close]

BLAST of CF810888 vs. TrEMBL
Match: D7LTC0|D7LTC0_ARALY (NPL4 family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_486804 PE=4 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 5.279e-66
Identity = 118/188 (62.77%), Postives = 147/188 (78.19%), Query Frame = 3

Query:   21 PSLTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTV-AGPQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            P +T++QLK+ I+ QL++PI             AKTP+D   FTDM +P   IS+L +AHGSM++L+YEG+RT+  GP   PAGSFGRKMT++DLIA+QMRV RQE  +C+ VSFDRD ANAFQ+YVNESLAFAVKRGG MYG VS EG+VEV+FIYEPPQQG E+ LIL+RD +EEK V+AIA+GLG
Sbjct:   20 PHITVSQLKTLIQDQLQIPIHNQTLSTNRNLLLAKTPADFLGFTDMADPNLRISSLNLAHGSMLFLAYEGERTIRGGPAVTPAGSFGRKMTVEDLIARQMRVGRQEKSHCDSVSFDRDCANAFQHYVNESLAFAVKRGGFMYGNVSEEGQVEVNFIYEPPQQGMEDNLILMRDSEEEKRVDAIALGLG 207

HSP 2 Score: 37.7354 bits (86), Expect = 5.279e-66
Identity = 15/24 (62.50%), Postives = 20/24 (83.33%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRKDYTM 645
            G GMR+VGFIF QT+ Q +K+YT+
Sbjct:  205 GLGMRRVGFIFNQTVTQDKKEYTL 228

[Close]

BLAST of CF810888 vs. TrEMBL
Match: D7LHE3|D7LHE3_ARALY (NPL4 family protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_483989 PE=4 SV=1)

HSP 1 Score: 240.35 bits (612), Expect = 3.385e-65
Identity = 117/187 (62.57%), Postives = 149/187 (79.68%), Query Frame = 3

Query:   24 SLTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAG-PQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            ++T++QLK+ IE QL++P+             AKTP+D+  FTD+T+P   +S+L + HGSM++L+Y+G+R++ G P   PAGSFGRKMT+DDLIA+QMRVTRQE  +C+ VSFDRD ANAFQ+YVN+SLAFAVKRGG MYGTV+  G+VEVDFIYEPPQQGTE  LIL+RD DEEK V+AIAMGLG
Sbjct:   20 NITVSQLKTLIEDQLQIPLHKQTLSTNRDLLLAKTPADLLAFTDLTDPNLPLSSLNLGHGSMLFLAYDGERSIPGAPPVTPAGSFGRKMTVDDLIARQMRVTRQETSHCDSVSFDRDCANAFQHYVNDSLAFAVKRGGFMYGTVTEGGQVEVDFIYEPPQQGTEANLILMRDADEEKRVDAIAMGLG 206

HSP 2 Score: 33.4982 bits (75), Expect = 3.385e-65
Identity = 14/24 (58.33%), Postives = 18/24 (75.00%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRKDYTM 645
            G G+RKVGFIF QT+ Q +  YT+
Sbjct:  204 GLGVRKVGFIFNQTVVQDKTGYTL 227

[Close]

BLAST of CF810888 vs. TrEMBL
Match: D5A9C1|D5A9C1_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 222.631 bits (566), Expect = 2.578e-62
Identity = 111/189 (58.73%), Postives = 140/189 (74.07%), Query Frame = 3

Query:   21 PSLTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAGPQFN--PAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            PS T+ + KS I+SQL+VPIP            AK  ++  +F DM +P   +S+LGI HG +++LSYEG+R++AGPQ N  P+GSFG+KMTMDDLI++Q+R+ RQ+ P+C   SFDRDAAN FQ YVNE+LAFA+KRGG MYGTV   G V V+FIYE PQQGTE+ L L RD DEEK VEAIA+GLG
Sbjct:   19 PSATVGEFKSLIQSQLQVPIPSQILSTNQNLLLAKG-NNTQQFKDMEDPNIPLSSLGIGHGHIVFLSYEGERSIAGPQINVNPSGSFGKKMTMDDLISRQVRIERQDKPHCGSASFDRDAANGFQQYVNENLAFAIKRGGFMYGTVGEGGDVAVNFIYEHPQQGTEDSLFLFRDQDEEKRVEAIAIGLG 206

HSP 2 Score: 41.5874 bits (96), Expect = 2.578e-62
Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRKDYTM 645
            G GMR+VGFIFTQTI Q +KDYT+
Sbjct:  204 GLGMRRVGFIFTQTITQGKKDYTL 227

[Close]

BLAST of CF810888 vs. TrEMBL
Match: B9S3Y6|B9S3Y6_RICCO (Nuclear protein localization, putative OS=Ricinus communis GN=RCOM_0557110 PE=4 SV=1)

HSP 1 Score: 214.542 bits (545), Expect = 6.784e-60
Identity = 108/188 (57.45%), Postives = 136/188 (72.34%), Query Frame = 3

Query:   18 NPSLTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAGPQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            NP++T++QLK+ I++QL +PI             AK+PSDV KFTDM+NP T +S+L I HGS+++L+Y+G+RT+AGP  NPAGSFGRKMTMDDLIAKQMR+TRQENP+CE VSFDRD ANAFQ+                   +    K+    IYEPPQQGTEE L+LLRDP+EEKLV+AIA+GLG
Sbjct:   18 NPNITVSQLKTLIQNQLNIPIQNQTLSTNQNLLLAKSPSDVLKFTDMSNPNTPLSSLNITHGSILFLTYDGERTIAGPAVNPAGSFGRKMTMDDLIAKQMRITRQENPHCESVSFDRDCANAFQH-------------------IPMMVKLRFIIIYEPPQQGTEENLMLLRDPEEEKLVDAIAVGLG 186

HSP 2 Score: 41.5874 bits (96), Expect = 6.784e-60
Identity = 18/24 (75.00%), Postives = 21/24 (87.50%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRKDYTM 645
            G GMR+VGFIFTQTI Q +KDYT+
Sbjct:  184 GLGMRRVGFIFTQTITQDKKDYTL 207

[Close]

BLAST of CF810888 vs. TrEMBL
Match: A9SAL9|A9SAL9_PHYPA (Predicted protein OS=Physcomitrella patens subsp. patens GN=PHYPADRAFT_163834 PE=4 SV=1)

HSP 1 Score: 204.142 bits (518), Expect = 4.674e-55
Identity = 98/184 (53.26%), Postives = 131/184 (71.20%), Query Frame = 3

Query:   30 TIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAGPQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            T+  L++ I   L VP+             +K P +  +F DM +    +S+LGIAHGS++YL Y G R V GPQ  P G+FGRKMT++DLIA+Q+R+ RQE  +C  +SFDR+AANAFQ YV+ESLAF++KRGGIMYG+V+  G+++VD IYEPPQQG+EE L+L+RD DEEK  + IA GLG
Sbjct:   21 TVGDLQAAIAENLNVPVSSQLLSRNQALLLSKDPVNGKEFADMQDSGATLSSLGIAHGSLLYLFYSGNRVVKGPQVTPFGAFGRKMTVEDLIARQIRIERQEKSHCSALSFDREAANAFQLYVHESLAFSIKRGGIMYGSVNEAGEIKVDVIYEPPQQGSEEGLLLMRDMDEEKRADVIAAGLG 204

HSP 2 Score: 35.8094 bits (81), Expect = 4.674e-55
Identity = 16/24 (66.67%), Postives = 19/24 (79.17%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRKDYTM 645
            G G+RKVGFIFTQTI Q +  YT+
Sbjct:  202 GLGLRKVGFIFTQTITQNQGGYTL 225

[Close]

BLAST of CF810888 vs. TrEMBL
Match: C5XR81|C5XR81_SORBI (Putative uncharacterized protein Sb03g041070 OS=Sorghum bicolor GN=Sb03g041070 PE=4 SV=1)

HSP 1 Score: 175.252 bits (443), Expect = 1.814e-44
Identity = 100/191 (52.36%), Postives = 123/191 (64.40%), Query Frame = 3

Query:   24 SLTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAGPQ----FNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGK-VEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            S T+A L+  IES L VP+P                + V    D   P T +++L +A+G+ +YL+Y      A P      + AGSFG+KMTMDDLIA+Q+RVTRQEN  C   SFDRDAANAFQ YV ESLAFAVKR G +YG V  E K V VDFIYEPPQQG+E+V+ L+RDP+EE  V+ IA GLG
Sbjct:   21 SATVADLQRLIESHLTVPVPLQRLSLDPALLLPNPSAAVPLLAD---PATPLASLRLANGAFVYLAYPPDARSARPPPPKALSVAGSFGKKMTMDDLIARQIRVTRQENALCAAASFDRDAANAFQLYVAESLAFAVKRAGFLYGRVDAETKEVFVDFIYEPPQQGSEDVVHLMRDPEEEARVDTIAEGLG 208

HSP 2 Score: 29.261 bits (64), Expect = 1.814e-44
Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRK---DYTM 645
            G GMR+VG +FTQ +G+      +YTM
Sbjct:  206 GLGMRRVGLVFTQAVGRKASETGEYTM 232

[Close]

BLAST of CF810888 vs. TrEMBL
Match: B4FHK5|B4FHK5_MAIZE (NPL4 family protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 173.326 bits (438), Expect = 6.818e-44
Identity = 99/191 (51.83%), Postives = 121/191 (63.35%), Query Frame = 3

Query:   24 SLTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAGPQ----FNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGK-VEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            S+T+A L+  IES L VP+P                + V   TD   P   +++L +A+G+ +YL+Y      A P      + AGSFG+KMTMDDLIA+Q+RVTRQEN  C   SFDRDAANAFQ YV E L F VKR G +YG V  E K V VDFIYEPPQQG+E+V+ LLRDPDEE  V+ IA GLG
Sbjct:   21 SVTVADLQRLIESHLTVPVPLQRLSLDPALLLPNPSAVVPLLTDSAAP---LASLRLANGAFVYLAYPPDARSARPPPPKALSAAGSFGKKMTMDDLIARQIRVTRQENALCAAASFDRDAANAFQLYVAEFLGFGVKRAGFLYGRVDAETKDVFVDFIYEPPQQGSEDVVHLLRDPDEEARVDTIAEGLG 208

HSP 2 Score: 29.261 bits (64), Expect = 6.818e-44
Identity = 13/27 (48.15%), Postives = 18/27 (66.67%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRK---DYTM 645
            G GMR+VG +FTQ +G+      +YTM
Sbjct:  206 GLGMRRVGLVFTQAVGRKASETGEYTM 232

[Close]

BLAST of CF810888 vs. TAIR peptide
Match: AT2G47970.1 (| Symbols: | Nuclear pore localisation protein NPL4 | chr2:19629525-19630973 FORWARD LENGTH=413)

HSP 1 Score: 244.588 bits (623), Expect = 4.449e-69
Identity = 120/186 (64.52%), Postives = 149/186 (80.11%), Query Frame = 3

Query:   27 LTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAG-PQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            +T++QLK+ I  QL++P+             AKTP+D+  FTD+T+P   +S+L + HGSM+YL+Y+G+R++ G P   PAGSFGRKMT+DDLIA+QMRVTRQE  +C+ VSFDRDAANAFQ+YVNESLAFAVKRGG MYGTV+ EG+VEVDFIYEPPQQGTE  LIL+RD DEEK V+AIAMGLG
Sbjct:   22 ITVSQLKTLIADQLQIPLHKQTLSTNRDLLLAKTPADLLAFTDLTDPNLPLSSLNLGHGSMLYLAYDGERSIPGAPPVTPAGSFGRKMTVDDLIARQMRVTRQETSHCDSVSFDRDAANAFQHYVNESLAFAVKRGGFMYGTVTEEGQVEVDFIYEPPQQGTEANLILMRDADEEKRVDAIAMGLG 207

HSP 2 Score: 35.039 bits (79), Expect = 4.449e-69
Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRKDYTM 645
            G GMR+VGFIF QT+ Q + +YT+
Sbjct:  205 GLGMRRVGFIFNQTVVQDKTEYTL 228

[Close]

BLAST of CF810888 vs. TAIR peptide
Match: AT2G47970.2 (| Symbols: | Nuclear pore localisation protein NPL4 | chr2:19629525-19630589 FORWARD LENGTH=354)

HSP 1 Score: 244.588 bits (623), Expect = 4.454e-69
Identity = 120/186 (64.52%), Postives = 149/186 (80.11%), Query Frame = 3

Query:   27 LTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTVAG-PQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            +T++QLK+ I  QL++P+             AKTP+D+  FTD+T+P   +S+L + HGSM+YL+Y+G+R++ G P   PAGSFGRKMT+DDLIA+QMRVTRQE  +C+ VSFDRDAANAFQ+YVNESLAFAVKRGG MYGTV+ EG+VEVDFIYEPPQQGTE  LIL+RD DEEK V+AIAMGLG
Sbjct:   22 ITVSQLKTLIADQLQIPLHKQTLSTNRDLLLAKTPADLLAFTDLTDPNLPLSSLNLGHGSMLYLAYDGERSIPGAPPVTPAGSFGRKMTVDDLIARQMRVTRQETSHCDSVSFDRDAANAFQHYVNESLAFAVKRGGFMYGTVTEEGQVEVDFIYEPPQQGTEANLILMRDADEEKRVDAIAMGLG 207

HSP 2 Score: 35.039 bits (79), Expect = 4.454e-69
Identity = 14/24 (58.33%), Postives = 19/24 (79.17%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRKDYTM 645
            G GMR+VGFIF QT+ Q + +YT+
Sbjct:  205 GLGMRRVGFIFNQTVVQDKTEYTL 228

[Close]

BLAST of CF810888 vs. TAIR peptide
Match: AT3G63000.1 (| Symbols: NPL41 | NPL4-like protein 1 | chr3:23283836-23285357 FORWARD LENGTH=413)

HSP 1 Score: 238.039 bits (606), Expect = 6.326e-68
Identity = 117/188 (62.23%), Postives = 147/188 (78.19%), Query Frame = 3

Query:   21 PSLTIAQLKSTIESQLRVPIPXXXXXXXXXXXXAKTPSDVSKFTDMTNPQTLISTLGIAHGSMIYLSYEGQRTV-AGPQFNPAGSFGRKMTMDDLIAKQMRVTRQENPYCEMVSFDRDAANAFQNYVNESLAFAVKRGGIMYGTVSPEGKVEVDFIYEPPQQGTEEVLILLRDPDEEKLVEAIAMGLG 581
            P +T++QLK+ I+ QL++PI             AK+PSD   FTDM +P   IS+L +AHGSM+YL+YEG+RT+  GP   PAGSFGRKMT++DLIA+QMRV RQE  +C+ VSFDRD ANAFQ++VNESLAFAVKRGG MYG VS +G+VEV+FIYEPPQQG E+ LIL+RD +EEK V+AIA+GLG
Sbjct:   20 PHITVSQLKTLIQDQLQIPIHNQTLSTNRNLLLAKSPSDFLAFTDMADPNLRISSLNLAHGSMVYLAYEGERTIRGGPAVTPAGSFGRKMTVEDLIARQMRVGRQEKAHCDSVSFDRDCANAFQHFVNESLAFAVKRGGFMYGNVSEDGQVEVNFIYEPPQQGMEDNLILMRDSEEEKRVDAIALGLG 207

HSP 2 Score: 37.7354 bits (86), Expect = 6.326e-68
Identity = 15/24 (62.50%), Postives = 20/24 (83.33%), Query Frame = 1

Query:  574 GWGMRKVGFIFTQTIGQXRKDYTM 645
            G GMR+VGFIF QT+ Q +K+YT+
Sbjct:  205 GLGMRRVGFIFNQTVTQDKKEYTL 228

The following BLAST results are available for this feature:

BLAST of CF810888 vs. DB:swissprot:display
BLAST of CF810888 vs. Populus trichocarpa peptide v2.0
BLAST of CF810888 vs. P. persica 1.0 peptide
BLAST of CF810888 vs. TrEMBL
BLAST of CF810888 vs. TAIR peptide

BLAST of CF810888 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 4


Match Name	E-value	Identity	Description
NPL42_ARATH	4.319e-68	64.52	NPL4-like protein 2 OS=Arabidopsis thaliana GN=At2...	[more]
NPL41_ARATH	6.142e-67	62.23	NPL4-like protein 1 OS=Arabidopsis thaliana GN=At3...	[more]
NPL4_ORYSJ	2.226e-41	48.21	NPL4-like protein OS=Oryza sativa subsp. japonica ...	[more]
NPL4_DICDI	3.918e-7	37.36	Nuclear protein localization protein 4 homolog OS=...	[more]

BLAST of CF810888 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
POPTR_0002s22770.1	3.006e-78	69.43		[more]
POPTR_0014s13120.1	9.494e-77	68.39		[more]

BLAST of CF810888 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa006427m	1.293e-73	63.98		[more]

BLAST of CF810888 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
A9PCA9\|A9PCA9_POPTR	3.747e-76	69.43	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5BEN5\|A5BEN5_VITVI	1.402e-75	67.36	Putative uncharacterized protein OS=Vitis vinifera...	[more]
B9I9Y7\|B9I9Y7_POPTR	1.186e-74	68.39	Predicted protein (Fragment) OS=Populus trichocarp...	[more]
D7LTC0\|D7LTC0_ARALY	5.279e-66	62.77	NPL4 family protein OS=Arabidopsis lyrata subsp. l...	[more]
D7LHE3\|D7LHE3_ARALY	3.385e-65	62.57	NPL4 family protein OS=Arabidopsis lyrata subsp. l...	[more]
D5A9C1\|D5A9C1_PICSI	2.578e-62	58.73	Putative uncharacterized protein OS=Picea sitchens...	[more]
B9S3Y6\|B9S3Y6_RICCO	6.784e-60	57.45	Nuclear protein localization, putative OS=Ricinus ...	[more]
A9SAL9\|A9SAL9_PHYPA	4.674e-55	53.26	Predicted protein OS=Physcomitrella patens subsp. ...	[more]
C5XR81\|C5XR81_SORBI	1.814e-44	52.36	Putative uncharacterized protein Sb03g041070 OS=So...	[more]
B4FHK5\|B4FHK5_MAIZE	6.818e-44	51.83	NPL4 family protein OS=Zea mays PE=2 SV=1	[more]

BLAST of CF810888 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT2G47970.1	4.449e-69	64.52	\| Symbols: \| Nuclear pore localisation protein NP...	[more]
AT2G47970.2	4.454e-69	64.52	\| Symbols: \| Nuclear pore localisation protein NP...	[more]
AT3G63000.1	6.326e-68	62.23	\| Symbols: NPL41 \| NPL4-like protein 1 \| chr3:2328...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 10..23 score: NAcoord: 27..52 score
None	No IPR available	SEG	seg	seg	coord: 27..46 score
None	No IPR available	PANTHER	PTHR12710	NUCLEAR PROTEIN LOCALIZATION 4	coord: 2..211 score: 2
None	No IPR available	SEG	seg	seg	coord: 28..39 score
None	No IPR available	SUPERFAMILY	54236	Ubiquitin-like	coord: 6..82 score: 7
IPR007717	NPL4	PFAM	PF05021	NPL4	coord: 142..195 score: 3.3

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CF810888 ID=CF810888; Name=CF810888; organism=Vaccinium corymbosum; type=EST; length=663bp
TCACAATCGACAACCCCAACCCGAGCCTCACAATTGCCCAACTCAAATCC
ACAATCGAGTCTCAACTCAGAGTTCCTATCCCCAACCAAACCCTATCCAC
CAACCAAAACCTCCTCCTCGCCAAAACCCCATCCGACGTCTCCAAGTTCA
CCGACATGACCAACCCACAAACCCTAATCTCCACCCTCGGCATCGCCCAC
GGCTCGATGATCTACTTATCCTACGAGGGCCAGCGGACCGTGGCGGGGCC
TCAGTTCAACCCGGCCGGATCGTTCGGGCGCAAGATGACTATGGATGATT
TAATTGCCAAGCAAATGCGGGTCACTCGACAGGAAAACCCTTATTGTGAG
ATGGTCTCGTTTGATCGGGATGCTGCCAATGCGTTTCAGAACTATGTTAA
TGAGTCACTCGCGTTTGCGGTGAAGCGCGGTGGGATTATGTATGGTACGG
TCTCACCGGAGGGGAAAGTCGAAGTGGATTTCATTTACGAGCCGCCGCAA
CAGGGCACCGAGGAGGTTTTGATACTTTTGCGAGATCCTGATGAGGAGAA
GCTGGTTGAGGCAATCGCGATGGGGTTGGGGAATGAGGAAAGTAGGGTTT
ATATTTACTCAGACGATTGGTCAGAANAGAAAAGATTACACGATGGTCGA
ATGTGGAGGTTTB

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **KEGG ORTHOLOGY**
Term	Definition
K14015	NPLOC4, NPL4; nuclear protein localization protein 4 homolog

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated
IPR007717	NPL4_C