CF810978
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF810978 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s35830.1 () HSP 1 Score: 76.2554 bits (186), Expect = 1.095e-14 Identity = 52/129 (40.31%), Postives = 62/129 (48.06%), Query Frame = 2 Query: 98 TLFTTKPSHPFLS---KPIKFSPLSAPFPSWVSLKNKFSSSSGVVPLVAHTSDWAQXXXXXXXXXNPVEGFNWXXXXXXXXXXXXXXXXXXXXXXXXXXAKVFVGGLPFDIDSEKLAQLFDQAXVVEIA 475 T+F T PF+S KPIK S FPSWVSLK S+ +PLVA TSDWAQ E F AK++VG LP+D++SE LAQLFDQA VE+A Sbjct: 15 TVFDTSIKSPFISITSKPIKVV-FSTSFPSWVSLKTSNFSTFNTIPLVAQTSDWAQQDEEDTVTLGE-ESFG--------------DGSEETFPEPPEEAKLYVGNLPYDVNSENLAQLFDQAGTVEVA 127
BLAST of CF810978 vs. P. persica 1.0 peptide
Match: ppa009286m () HSP 1 Score: 82.8037 bits (203), Expect = 8.358e-17 Identity = 61/155 (39.35%), Postives = 79/155 (50.97%), Query Frame = 2 Query: 29 MTSATGPLIKSLLIPKCCITAVPTLFTTKPSHPFL---SKPIKFS---PLSAPFPSWVSLKNKFSSSSGVVPLVAHTSDWAQXXXXXXXXXNPVEGFNWXXXXXXXXXXXXXXXXXXXXXXXXXXAKVFVGGLPFDIDSEKLAQLFDQAXVVEIA 475 M SAT L K+L I C+ ++P L +TK ++ FL SKPIK ++ F +SLKNK SS +V VA TSDWAQ + EG AKVFVG LP+D+DS+KLA+LF++A VVEIA Sbjct: 1 MASATSNLFKTLSIADSCLVSLPYLSSTKTANSFLSIPSKPIKLHLTYTHASHFSPPLSLKNKTQFSS-IVSFVAQTSDWAQQEEDSTLTIDQDEG------AESGEEGVFAEREEEANVEPPEEAKVFVGNLPYDVDSQKLAELFERAGVVEIA 148
BLAST of CF810978 vs. P. persica 1.0 peptide
Match: ppa008913m () HSP 1 Score: 82.0333 bits (201), Expect = 1.426e-16 Identity = 61/168 (36.31%), Postives = 79/168 (47.02%), Query Frame = 2 Query: 29 MTSATGPLIKSLLIPKCCITAVPTLFTTKPSHPFL---SKPIKFSPLSAPF----PSWVSLKNKFSSSSGVVPL-VAHTSDWAQ-----------XXXXXXXXXNPVEGFNWXXXXXXXXXXXXXXXXXXXXXXXXXXAKVFVGGLPFDIDSEKLAQLFDQAXVVEIA 475 M+SAT +K + I + C+ +VP LF K +P L SKP K S +S F PSWVSLK+K +PL VA TSDWAQ + VE AK++VG LP+D+DSEKLA +F++A VVEIA Sbjct: 1 MSSATAAFLKPISIAESCLPSVPALFAPKNQYPILSLPSKPTKLSAVSCSFTPSLPSWVSLKHK------SLPLHVAQTSDWAQEEEVKEEGSGFESEGVEETEDGVEASALSDGEESSGDGVLAVGEEEYYPEPPEEAKLYVGNLPYDVDSEKLAHIFNEAGVVEIA 162
BLAST of CF810978 vs. TrEMBL
Match: D7TWF3|D7TWF3_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_66.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00032361001 PE=4 SV=1) HSP 1 Score: 91.2781 bits (225), Expect = 3.445e-17 Identity = 63/137 (45.99%), Postives = 73/137 (53.28%), Query Frame = 2 Query: 80 CITAVPT-LFTTKPSHPFLS---KPIKFSPLSAP-FPSWVSLKNKFSSSSGVVPLVAHTSDWAQXXXXXXXXXNPVEGFNWXXXXXXXXXXXXXXXXXXXXXXXXXXAKVFVGGLPFDIDSEKLAQLFDQAXVVEIA 475 C+T+VPT LFTTK HP LS KP++ LS SWVSLK K +S + +VP VA TSDWAQ EG AK+FVG LP+DIDSEKLAQLFD+A VVEIA Sbjct: 5 CLTSVPTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSSSWVSLKTK-TSPTTLVPFVAQTSDWAQQEEEEEKDGEESEG------------------SEDTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIA 122
BLAST of CF810978 vs. TrEMBL
Match: C6T9I0|C6T9I0_SOYBN (Putative uncharacterized protein (Fragment) OS=Glycine max PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 5.327e-10 Identity = 51/153 (33.33%), Postives = 67/153 (43.79%), Query Frame = 2 Query: 29 MTSATGPLIKSLLIPKCCITAVPTLFTTKPSHPFLSKPIKFSPLSAPFP----SWVSLKNKFSSSSGVVPLVAHTSDWAQXXXXXXXXXNPVEGFNWXXXXXXXXXXXXXXXXXXXXXXXXXXAKVFVGGLPFDIDSEKLAQLFDQAXVVEIA 475 M+ T KSL + + C+ ++P+LF K + LS P K PL+ P S L K + S ++ VA TSDWA+ E +W K+FVG LPFDIDSE LA LF QA VE+A Sbjct: 4 MSLTTVAAFKSLTMAESCLLSLPSLFYAKNNTLSLSIPTK--PLNLHLPCSNSSLFPLTTKTTRHSSLLTFVAQTSDWAKEEEE--------EETSWENQGDTAWGTEEGGHEEGGFAEKAEEDKIFVGNLPFDIDSENLASLFGQAGTVEVA 146
BLAST of CF810978 vs. Vitis vinifera peptide
Match: GSVIVT01032361001 (assembled CDS) HSP 1 Score: 91.2781 bits (225), Expect = 2.022e-19 Identity = 63/137 (45.99%), Postives = 73/137 (53.28%), Query Frame = 2 Query: 80 CITAVPT-LFTTKPSHPFLS---KPIKFSPLSAP-FPSWVSLKNKFSSSSGVVPLVAHTSDWAQXXXXXXXXXNPVEGFNWXXXXXXXXXXXXXXXXXXXXXXXXXXAKVFVGGLPFDIDSEKLAQLFDQAXVVEIA 475 C+T+VPT LFTTK HP LS KP++ LS SWVSLK K +S + +VP VA TSDWAQ EG AK+FVG LP+DIDSEKLAQLFD+A VVEIA Sbjct: 5 CLTSVPTTLFTTKTPHPLLSLPPKPVRLFHLSCSCSSSWVSLKTK-TSPTTLVPFVAQTSDWAQQEEEEEKDGEESEG------------------SEDTYSEPPEEAKLFVGNLPYDIDSEKLAQLFDEAGVVEIA 122
BLAST of CF810978 vs. Vitis vinifera peptide
Match: GSVIVT01007596001 (assembled CDS) HSP 1 Score: 78.1814 bits (191), Expect = 1.771e-15 Identity = 62/158 (39.24%), Postives = 77/158 (48.73%), Query Frame = 2 Query: 29 MTSATGPLIKSLLIPKCCITAVPTLFTTKPSHPFL----SKPIKF---SPLSAPFPSWVSLKNKFSSSSGVVPLVAHTSDWAQ--XXXXXXXXXNPVEGFNWXXXXXXXXXXXXXXXXXXXXXXXXXXAKVFVGGLPFDIDSEKLAQLFDQAXVVEIA 475 M+SAT L+K IP ++PT+F+TK H +L KPIK S+ F + LK+K SSS VV VA TSDWAQ E W AKVFVG LP+D+DSE+LA+LF+QA VVEIA Sbjct: 1 MSSATHHLLKPFSIPNGSPISLPTIFSTKTPHSYLPIPPHKPIKLLLSCSQSSLFSPSLFLKSKTLSSS-VVTFVAQTSDWAQQEEDNTVIIEEEQEEKVTW-ENEEAISDDGVVDDGEDSYSEPPEEAKVFVGNLPYDVDSERLARLFEQAGVVEIA 156 The following BLAST results are available for this feature:
BLAST of CF810978 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of CF810978 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 2
BLAST of CF810978 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 2
BLAST of CF810978 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF810978 ID=CF810978; Name=CF810978; organism=Vaccinium corymbosum; type=EST; length=488bpback to top |