CV090260
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV090260 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s04750.1 () HSP 1 Score: 124.405 bits (311), Expect = 6.739e-29 Identity = 82/161 (50.93%), Postives = 95/161 (59.01%), Query Frame = 1 Query: 136 QRKSYFAPEDFFPDPKQMASSIYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLHS-QITNHRNERSFSSHQSPIVVMKPS---GSPIPPRKRTIATDSPPTVHRTGTGVRRSLTYXCECSLGASXXXXXXXXXXXXXDQARARNSSSPTRREINSR 606 QRKS+F DFFP+PKQ S IYGEIEKRL+ RGIDE + DLE LKHILEALQLKGLLHS + N N+R+F +SPIV+MKP+ S P R I DSP + R +GVRR Y E S Q R RN SSP E +SR Sbjct: 288 QRKSFFDSADFFPEPKQTVS-IYGEIEKRLRMRGIDEPSKDLETLKHILEALQLKGLLHSNKPANQINQRNFVYEESPIVLMKPAKSLASMNMPAGR-IINDSPLSSFRPRSGVRRDPNY-AETLPAMSPRRERPEIEKNARGQVRGRNLSSPMGNESSSR 445
BLAST of CV090260 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s23780.1 () HSP 1 Score: 103.219 bits (256), Expect = 1.608e-22 Identity = 66/152 (43.42%), Postives = 87/152 (57.24%), Query Frame = 1 Query: 40 VGGSTGPRNRX---SAFRGIP-LRPYSTGSPRKPSQQRKSYFAPEDFFPDPKQMASSIYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLHS-QITNHRNERSFSSHQSPIV---VMKPSGSPIPPRKRTIATDSPPTVHRTGTGVRR 471 + G+ P R A+ + LR + K QRKS+F DFFP+PKQ S I GEIEKRLK RGIDE + DLE LKHILEALQLKGLLHS ++TN N+R+F ++P + +G P R+R ++ ++ V RR Sbjct: 186 IDGNLNPNGRAVDPKAYNAVRNLRAEPARAQNKGVGQRKSFFDSADFFPEPKQTIS-ICGEIEKRLKMRGIDEPSKDLETLKHILEALQLKGLLHSKKLTNQTNQRNFVYEETPNTSSPMANENGGRSPNRRRPMSVETQRRVSNDSLEQRR 336
BLAST of CV090260 vs. P. persica 1.0 peptide
Match: ppa001772m () HSP 1 Score: 121.324 bits (303), Expect = 4.026e-28 Identity = 94/228 (41.23%), Postives = 122/228 (53.51%), Query Frame = 1 Query: 40 VGGSTGPRNRXSAFRGIPLRPYSTGSPR-KPSQQRKSYFAPEDFFPDPKQMASSIYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLHSQIT----NHRN---ERSFSSHQSPIVVMKPSGSPIPP-RKRTIATDSPP-TVHRTGTGVRRSLTYXCECSLGASXXXXXXXXXXXXXDQARARNSSSPTRREINSRTSNSPTRGRALDAXTSXESFSGLIRQKLS 693 VG NR S R + + + + K QRKS+F DFFP+PKQ S +Y EIEKRL+ RGIDE + DLE LK ILEALQLKGLLHS+ N RN +RSF S++SPIVVM+PS SP R +SPP + R+ GVRR+ E S S Q+R R+ S+PTRRE + SP+R L T + + +++S Sbjct: 251 VGKEDRSSNRGSNARQLDPKALNNAKAQSKGMGQRKSFFDSADFFPEPKQSVS-VYNEIEKRLRMRGIDEPSKDLETLKQILEALQLKGLLHSRKAANQINSRNFVYDRSFGSNESPIVVMRPSRSPSSSHRAARFGNESPPSSSFRSRPGVRRN----GEVSPAVS---PRRDRPENVRGQSRGRSPSAPTRRENGVK---SPSRRGPLVIETQRKGNDSVEHRRVS 467
BLAST of CV090260 vs. P. persica 1.0 peptide
Match: ppa000592m () HSP 1 Score: 53.9138 bits (128), Expect = 7.894e-8 Identity = 44/132 (33.33%), Postives = 56/132 (42.42%), Query Frame = 1 Query: 106 STGSPRKPSQQRKSYFAPEDFFPDPKQMASSIYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLH-----------------------SQITNHRNERSFSSH---------------QSPIVVMKPS 387 S GS + S+ K D FP S+Y EIEKRLK + DL ALK ILEA+Q KGLL SQ + N+R+ S+H +SPIV+MKP+ Sbjct: 430 SRGSQKPSSKPVKVQVRTPDSFP-------SVYSEIEKRLKDLEFKQSGKDLRALKQILEAMQAKGLLETKKEEQASNFGTQKDNESKYTSSSQNSRSVNQRNTSNHVISSTTRGSASSRTFESPIVIMKPA 554
BLAST of CV090260 vs. TrEMBL
Match: D7T3H8|D7T3H8_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_179.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00003137001 PE=4 SV=1) HSP 1 Score: 139.043 bits (349), Expect = 3.404e-31 Identity = 91/180 (50.56%), Postives = 107/180 (59.44%), Query Frame = 1 Query: 124 KPSQQRKSYFAPEDFFPDPKQMASSIYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLHSQIT----NHRN---ERSFSSHQSPIVVMKPSGSPIPP-RKRTIATDSPPTVHRTGTGVRRSLTYXCECSLGASXXXXXXXXXXXXXDQARARNSSSPTRREINSRTSNSPTRGRAL 639 K QQRKS+F EDFFP+PKQ S IYGEIE+RLK RGIDE A DLE LK ILEALQLKGLLH++ NHRN + SF +SPIVVMKP SP R +SPP RT VRR+ E S +QARA+NS SPTR E + ++S+S T +AL Sbjct: 298 KSPQQRKSFFDSEDFFPEPKQTVS-IYGEIERRLKMRGIDEPAKDLETLKQILEALQLKGLLHTKKPTNQFNHRNLVYDLSFPHDESPIVVMKPGRSPASTHRPLRTGKESPPPTSRTKPVVRRNANLSGETMPSVS--------PRNVRNQARAQNSGSPTRSESSVKSSSSLTTRKAL 468
BLAST of CV090260 vs. TrEMBL
Match: B9GS85|B9GS85_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_754257 PE=4 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.676e-27 Identity = 82/161 (50.93%), Postives = 95/161 (59.01%), Query Frame = 1 Query: 136 QRKSYFAPEDFFPDPKQMASSIYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLHS-QITNHRNERSFSSHQSPIVVMKPS---GSPIPPRKRTIATDSPPTVHRTGTGVRRSLTYXCECSLGASXXXXXXXXXXXXXDQARARNSSSPTRREINSR 606 QRKS+F DFFP+PKQ S IYGEIEKRL+ RGIDE + DLE LKHILEALQLKGLLHS + N N+R+F +SPIV+MKP+ S P R I DSP + R +GVRR Y E S Q R RN SSP E +SR Sbjct: 288 QRKSFFDSADFFPEPKQTVS-IYGEIEKRLRMRGIDEPSKDLETLKHILEALQLKGLLHSNKPANQINQRNFVYEESPIVLMKPAKSLASMNMPAGR-IINDSPLSSFRPRSGVRRDPNY-AETLPAMSPRRERPEIEKNARGQVRGRNLSSPMGNESSSR 445
BLAST of CV090260 vs. TrEMBL
Match: B9S4R0|B9S4R0_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0991200 PE=4 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.524e-26 Identity = 87/183 (47.54%), Postives = 101/183 (55.19%), Query Frame = 1 Query: 136 QRKSYFAPEDFFPDPKQMASSIYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLHS-QITNHRN----ERSFSSHQSPIVVMKPSGS------PIPPRKRTIATDSPPTVHRTGTGVRRSLTYXCECSLGASXXXXXXXXXXXXXDQARARNSSSPTRREINSRTSNSPTRGRALDAXT 651 QRKS+F DFFP+PKQ S IYGEIEKRLK RGIDE + DLE LK ILEALQLKGLLHS + TNHRN RSFS Q PIVV+KP S P+ R+ + +DSPP RR + E ++ +RNS SPTR E S + SP R R L T Sbjct: 288 QRKSFFDSADFFPEPKQTVS-IYGEIEKRLKMRGIDEPSKDLETLKQILEALQLKGLLHSKKPTNHRNFVYDNRSFSYDQPPIVVIKPPRSATAPSTPMTNRQGRLGSDSPPP-----RSCRRDSSPRTEIERNV-----------RNQNRGNSRNSISPTRSE--SSSVKSPHRRRPLSVET 451
BLAST of CV090260 vs. TrEMBL
Match: B9H8F0|B9H8F0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_861805 PE=4 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.070e-20 Identity = 66/152 (43.42%), Postives = 87/152 (57.24%), Query Frame = 1 Query: 40 VGGSTGPRNRX---SAFRGIP-LRPYSTGSPRKPSQQRKSYFAPEDFFPDPKQMASSIYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLHS-QITNHRNERSFSSHQSPIV---VMKPSGSPIPPRKRTIATDSPPTVHRTGTGVRR 471 + G+ P R A+ + LR + K QRKS+F DFFP+PKQ S I GEIEKRLK RGIDE + DLE LKHILEALQLKGLLHS ++TN N+R+F ++P + +G P R+R ++ ++ V RR Sbjct: 184 IDGNLNPNGRAVDPKAYNAVRNLRAEPARAQNKGVGQRKSFFDSADFFPEPKQTIS-ICGEIEKRLKMRGIDEPSKDLETLKHILEALQLKGLLHSKKLTNQTNQRNFVYEETPNTSSPMANENGGRSPNRRRPMSVETQRRVSNDSLEQRR 334
BLAST of CV090260 vs. TrEMBL
Match: Q2R1Y3|Q2R1Y3_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=LOC_Os11g37670 PE=4 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.216e-12 Identity = 51/108 (47.22%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 136 QRKSYFAPEDFFPDP-KQMASS---------IYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLHSQITNHRNERSFSSHQSPIVVMKPSG-SPIPPRKRTIAT 426 QR+S F D FP+P K++ S +YGEIE+RL+ RGI E A DLE LK ILEALQLKGLL + PIVVM+PS P PP RT T Sbjct: 200 QRRSRFDAHDVFPEPAKRVVDSAAAGHGEIALYGEIERRLRKRGIAEPARDLETLKQILEALQLKGLLRHTPPPPVSSLRTQPPPPPIVVMRPSSRPPQPPASRTSPT 307
BLAST of CV090260 vs. TrEMBL
Match: Q0IRY0|Q0IRY0_ORYSJ (Os11g0587300 protein OS=Oryza sativa subsp. japonica GN=Os11g0587300 PE=4 SV=2) HSP 1 Score: 77.411 bits (189), Expect = 1.216e-12 Identity = 51/108 (47.22%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 136 QRKSYFAPEDFFPDP-KQMASS---------IYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLHSQITNHRNERSFSSHQSPIVVMKPSG-SPIPPRKRTIAT 426 QR+S F D FP+P K++ S +YGEIE+RL+ RGI E A DLE LK ILEALQLKGLL + PIVVM+PS P PP RT T Sbjct: 234 QRRSRFDAHDVFPEPAKRVVDSAAAGHGEIALYGEIERRLRKRGIAEPARDLETLKQILEALQLKGLLRHTPPPPVSSLRTQPPPPPIVVMRPSSRPPQPPASRTSPT 341
BLAST of CV090260 vs. TrEMBL
Match: B9G8D3|B9G8D3_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_34501 PE=4 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.216e-12 Identity = 51/108 (47.22%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 136 QRKSYFAPEDFFPDP-KQMASS---------IYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLHSQITNHRNERSFSSHQSPIVVMKPSG-SPIPPRKRTIAT 426 QR+S F D FP+P K++ S +YGEIE+RL+ RGI E A DLE LK ILEALQLKGLL + PIVVM+PS P PP RT T Sbjct: 237 QRRSRFDAHDVFPEPAKRVVDSAAAGHGEIALYGEIERRLRKRGIAEPARDLETLKQILEALQLKGLLRHTPPPPVSSLRTQPPPPPIVVMRPSSRPPQPPASRTSPT 344
BLAST of CV090260 vs. TrEMBL
Match: B8BLE5|B8BLE5_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_36732 PE=4 SV=1) HSP 1 Score: 77.411 bits (189), Expect = 1.216e-12 Identity = 51/108 (47.22%), Postives = 60/108 (55.56%), Query Frame = 1 Query: 136 QRKSYFAPEDFFPDP-KQMASS---------IYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLHSQITNHRNERSFSSHQSPIVVMKPSG-SPIPPRKRTIAT 426 QR+S F D FP+P K++ S +YGEIE+RL+ RGI E A DLE LK ILEALQLKGLL + PIVVM+PS P PP RT T Sbjct: 237 QRRSRFDAHDVFPEPAKRVVDSAAAGHGEIALYGEIERRLRKRGIAEPARDLETLKQILEALQLKGLLRHTPPPPVSSLRTQPPPPPIVVMRPSSRPPQPPASRTSPT 344
BLAST of CV090260 vs. TrEMBL
Match: C5Y5C6|C5Y5C6_SORBI (Putative uncharacterized protein Sb05g022870 OS=Sorghum bicolor GN=Sb05g022870 PE=4 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 6.036e-12 Identity = 51/115 (44.35%), Postives = 64/115 (55.65%), Query Frame = 1 Query: 136 QRKSYFAPEDFFPDP-KQMAS------------SIYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLHSQITNHRNERSFSSHQSPIVVMKPSGSPIPPRKRTIATDSPPT 441 QR+S F + FP+P KQ A ++YGEIE+RL+ RGI E A DLE LK ILEALQLKGLLH ++ + PIVVM+PS PP+ SPP+ Sbjct: 263 QRRSRFDAHEVFPEPAKQRADPASGGGAAPGEIALYGEIERRLRKRGIAEPARDLETLKQILEALQLKGLLH-HTPPPAPAQAQRTPPPPIVVMRPSNRAPPPQM------SPPS 370
BLAST of CV090260 vs. Vitis vinifera peptide
Match: GSVIVT01003137001 (assembled CDS) HSP 1 Score: 139.043 bits (349), Expect = 1.610e-33 Identity = 91/180 (50.56%), Postives = 107/180 (59.44%), Query Frame = 1 Query: 124 KPSQQRKSYFAPEDFFPDPKQMASSIYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLHSQIT----NHRN---ERSFSSHQSPIVVMKPSGSPIPP-RKRTIATDSPPTVHRTGTGVRRSLTYXCECSLGASXXXXXXXXXXXXXDQARARNSSSPTRREINSRTSNSPTRGRAL 639 K QQRKS+F EDFFP+PKQ S IYGEIE+RLK RGIDE A DLE LK ILEALQLKGLLH++ NHRN + SF +SPIVVMKP SP R +SPP RT VRR+ E S +QARA+NS SPTR E + ++S+S T +AL Sbjct: 298 KSPQQRKSFFDSEDFFPEPKQTVS-IYGEIERRLKMRGIDEPAKDLETLKQILEALQLKGLLHTKKPTNQFNHRNLVYDLSFPHDESPIVVMKPGRSPASTHRPLRTGKESPPPTSRTKPVVRRNANLSGETMPSVS--------PRNVRNQARAQNSGSPTRSESSVKSSSSLTTRKAL 468
BLAST of CV090260 vs. Vitis vinifera peptide
Match: GSVIVT01032914001 (assembled CDS) HSP 1 Score: 51.6026 bits (122), Expect = 3.380e-7 Identity = 44/138 (31.88%), Postives = 62/138 (44.93%), Query Frame = 1 Query: 1 KNSKFEPPNPRGVVGGSTGPRNRXSAFRGIPLRPYSTGSPRKPSQQRKSYFAPEDFFPDPKQMASSIYGEIEKRLKTRGIDEQANDLEALKHILEALQ-LKGLLHSQITNHRNERSFSSH--------QSPIVVMKPS 387 +NS +P +PR GS S F P+ P +K F + SIYGEIEKRL + DL ALK ILEA+Q K + ++ ++ N S +S+ +SPIV+MKP+ Sbjct: 298 RNSHKDPVSPRLRNAGSVMKPTSTSRF---PIEPAPWKQLDGSQGPQKPTFKHREAATKTLNSTPSIYGEIEKRLTELEFKKSGKDLRALKRILEAMQKTKETIEAKKDHNSNSVSQTSNRTSSPTSFKSPIVIMKPA 432
BLAST of CV090260 vs. TAIR peptide
Match: AT3G63430.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G74160.1); Has 135 Blast hits to 119 proteins in 22 species: Archae - 0; Bacteria - 2; Metazoa - 3; Fungi - 3; Plants - 119; Viruses - 0; Other Eukaryotes - 8 (source: NCBI BLink). | chr3:23420414-23422201 FORWARD LENGTH=540) HSP 1 Score: 57.3806 bits (137), Expect = 8.900e-9 Identity = 37/94 (39.36%), Postives = 47/94 (50.00%), Query Frame = 1 Query: 136 QRKSYFAPEDFFPDPKQMASSIYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLLHSQITNHRNERSFSSHQSPI-VVMKPSGSPIPPRKR 414 +RKS+F DFFP +M+ G D DLE LK +LEAL+LKGLLHS H++ H SPI V + SP R+R Sbjct: 182 RRKSFFDSGDFFPRVSKMS--------------GFDAPPTDLETLKQLLEALRLKGLLHSSSLKHQSRNLVFDHHSPIKPVRRDRISPSVNRRR 261
BLAST of CV090260 vs. TAIR peptide
Match: AT1G74160.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G18620.1); Has 3407 Blast hits to 2217 proteins in 314 species: Archae - 0; Bacteria - 264; Metazoa - 1296; Fungi - 318; Plants - 346; Viruses - 34; Other Eukaryotes - 1149 (source: NCBI BLink). | chr1:27887164-27891151 FORWARD LENGTH=1025) HSP 1 Score: 50.8322 bits (120), Expect = 8.330e-7 Identity = 65/267 (24.34%), Postives = 100/267 (37.45%), Query Frame = 1 Query: 10 KFEPPNPRGVVGGSTGPRNRXSAFRGIPLR---------PYSTGSPRKPSQQRKSYFAPEDFFPDPKQMASSIYGEIEKRLKTRGIDEQANDLEALKHILEALQLKGLL----HSQITNHRNERSF-------SSH-----------------QSPIVVMKPSGSPIPPRKRTIATDSPPTVHRTGTGVRRSLTYXCECSLGASXXXXXXXXXXXXXDQARARNSSSPTRREINSRTSNSPTRGRALDAXTSXESFSGLIRQKLSRK 699 +F P +PR + PR R S F PL P+ + Q++ S + P ++Y E+E+RL DL ALK ILE++Q KG L Q TN +R + S+H QSPIV+MKP+ K I S +H TG+++ + G S RA + +S ++ +SR S ++ + S SG + +L +K Sbjct: 334 RFSPSSPRSLGKDPASPRWRNSDFVMKPLSNTRFPVEPAPWKHADRNRVLQKQASMPVKAKPYEAPN-FPPTVYSEMERRLNDLEFKHSGKDLRALKQILESMQSKGFLDTEKQQQSTNFAVQRDYERENSATSNHAMSSRTRVQSSSSNQVYQSPIVIMKPAKL---VEKAGIPASSLIPIHSL-TGIKK-IRREKPDDKGTSASNSKRVTKDCSPGNRRAESCTSSFDKKSDSRNVRSSSKKPQQVSKESASKSSGSVSPRLQQK 594 The following BLAST results are available for this feature:
BLAST of CV090260 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 2
BLAST of CV090260 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 2
BLAST of CV090260 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 9
BLAST of CV090260 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 2
BLAST of CV090260 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV090260 ID=CV090260; Name=CV090260; organism=Vaccinium corymbosum; type=EST; length=700bpback to top Annotated Terms
The
following terms have been associated with
this EST:
|