CV090484 | GDV

EST Overview


Name	CV090484
Unique Name	CV090484
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	607

Libraries


Library Name	Type
LIBEST_014530 cDNA cold acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

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BLAST of CV090484 vs. DB:swissprot:display
Match: CENPV_MOUSE (Centromere protein V OS=Mus musculus GN=Cenpv PE=2 SV=2)

HSP 1 Score: 134.42 bits (337), Expect = 4.310e-31
Identity = 63/132 (47.73%), Postives = 87/132 (65.91%), Query Frame = 3

Query:  156 MVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQ-AGISSCSKE 548
            +V H GGCHC +VR+ V + + +  + CNCS C  + N HFIVP+ RF+LL  ++  ITTYTF TH A HTFCK CG+ SFYTPRSNP G  +   C+D GT+  V  ++++G +WE +  +   I + SKE
Sbjct:  122 LVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLLKGAES-ITTYTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSVVTEEFNGSDWERAMKEHKTIKNMSKE 252

[Close]

BLAST of CV090484 vs. DB:swissprot:display
Match: CENPV_HUMAN (Centromere protein V OS=Homo sapiens GN=CENPV PE=1 SV=1)

HSP 1 Score: 133.65 bits (335), Expect = 7.352e-31
Identity = 62/132 (46.97%), Postives = 87/132 (65.91%), Query Frame = 3

Query:  156 MVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQ-AGISSCSKE 548
            +V H GGCHC +VR+ V + + +  + CNCS C  + N HFIVP+ RF+LL  ++  ITTYTF TH A HTFCK CG+ SFYTPRSNP G  +   C+D GT+  +  ++++G +WE +  +   I + SKE
Sbjct:  145 LVKHTGGCHCGAVRFEVWASADLHIFDCNCSICKKKQNRHFIVPASRFKLLKGAEH-ITTYTFNTHKAQHTFCKRCGVQSFYTPRSNPGGFGIAPHCLDEGTVRSMVTEEFNGSDWEKAMKEHKTIKNMSKE 275

[Close]

BLAST of CV090484 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0017s02700.1 ()

HSP 1 Score: 260.766 bits (665), Expect = 4.720e-70
Identity = 114/134 (85.07%), Postives = 123/134 (91.79%), Query Frame = 3

Query:  144 MDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSK 545
            M+S+MV+HNGGCHCR VRWRVQ+PSSVVAW CNCSDCSMRGN HFIVPS +FELLGDSK+F+TTYTFGTHTA HTFCK CGITSFY PRSNPDGVAVTF CVDPGTLTHVEIK YDGRNWE SYNQ GI+SCS+
Sbjct:    1 MESDMVIHNGGCHCRRVRWRVQAPSSVVAWNCNCSDCSMRGNTHFIVPSEKFELLGDSKEFLTTYTFGTHTAKHTFCKFCGITSFYIPRSNPDGVAVTFRCVDPGTLTHVEIKHYDGRNWESSYNQTGIASCSQ 134

[Close]

BLAST of CV090484 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0293s00210.1 ()

HSP 1 Score: 241.121 bits (614), Expect = 3.870e-64
Identity = 106/134 (79.10%), Postives = 120/134 (89.55%), Query Frame = 3

Query:  144 MDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSK 545
            M+S+MV+HNGGCHCR VRWRVQ+PSSVVAW CNCSDCSMRGNI FIVPS +FELLGDSK+F+TTYTFGTHTA HTFCK CGITSFY PRS+PDGV++T  CVDPGTLTHVEIK +DG+NWE SYNQ   +SCS+
Sbjct:    1 MESDMVIHNGGCHCRRVRWRVQAPSSVVAWNCNCSDCSMRGNIQFIVPSEKFELLGDSKEFLTTYTFGTHTAKHTFCKFCGITSFYVPRSHPDGVSITCRCVDPGTLTHVEIKHFDGQNWERSYNQT-FASCSQ 133

[Close]

BLAST of CV090484 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0017s02690.1 ()

HSP 1 Score: 226.868 bits (577), Expect = 7.553e-60
Identity = 101/136 (74.26%), Postives = 115/136 (84.56%), Query Frame = 3

Query:  144 MDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSKEG 551
            M+S+MV+H GGCHCR VRWRVQ+PSSVVA  CNCS CSMR +I FIVPS +FELLGDSK+F+TTYTFGTHTA HTFCK CGITSFY PRSNPDGV++T+ CVDPGTLTHVEIK +DG+NWE SYN+   SS    G
Sbjct:    1 MESDMVMHYGGCHCRRVRWRVQAPSSVVALNCNCSICSMRASIQFIVPSEKFELLGDSKEFLTTYTFGTHTAKHTFCKFCGITSFYVPRSNPDGVSITYRCVDPGTLTHVEIKNFDGQNWERSYNETFASSSQGAG 136

[Close]

BLAST of CV090484 vs. P. persica 1.0 peptide
Match: ppa013190m ()

HSP 1 Score: 245.358 bits (625), Expect = 1.453e-65
Identity = 105/134 (78.36%), Postives = 120/134 (89.55%), Query Frame = 3

Query:  144 MDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSK 545
            MDSEMV H GGCHC+ VRWRVQ+P+ VVAW CNCS+CSMRGN HFIVP+ RFELLGDS+QF+TTY+FGTHTA H FCKVCGITSFY PRSNPDGV++TFTCVDPGTLTH+E+K YDG+NWE S+NQ GI+S SK
Sbjct:    1 MDSEMVAHEGGCHCKKVRWRVQAPTGVVAWSCNCSNCSMRGNTHFIVPADRFELLGDSEQFLTTYSFGTHTAKHKFCKVCGITSFYYPRSNPDGVSITFTCVDPGTLTHIEVKYYDGKNWETSHNQTGIASQSK 134

[Close]

BLAST of CV090484 vs. TrEMBL
Match: B9GUR1|B9GUR1_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645201 PE=4 SV=1)

HSP 1 Score: 259.61 bits (662), Expect = 1.246e-67
Identity = 113/134 (84.33%), Postives = 123/134 (91.79%), Query Frame = 3

Query:  144 MDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSK 545
            M+S+MV+HNGGCHCR VRWRVQ+PSSVVAW CNCSDCSMRGN HFIVPS +F+LLGDSK+F+TTYTFGTHTA HTFCK CGITSFY PRSNPDGVAVTF CVDPGTLTHVEIK YDGRNWE SYNQ GI+SCS+
Sbjct:    1 MESDMVIHNGGCHCRRVRWRVQAPSSVVAWNCNCSDCSMRGNTHFIVPSEKFDLLGDSKEFLTTYTFGTHTAKHTFCKFCGITSFYIPRSNPDGVAVTFRCVDPGTLTHVEIKHYDGRNWESSYNQTGIASCSQ 134

[Close]

BLAST of CV090484 vs. TrEMBL
Match: B9GUQ5|B9GUQ5_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_552923 PE=4 SV=1)

HSP 1 Score: 241.121 bits (614), Expect = 4.587e-62
Identity = 106/134 (79.10%), Postives = 120/134 (89.55%), Query Frame = 3

Query:  144 MDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSK 545
            M+S+MV+HNGGCHCR VRWRVQ+PSSVVAW CNCSDCSMRGNI FIVPS +FELLGDSK+F+TTYTFGTHTA HTFCK CGITSFY PRS+PDGV++T  CVDPGTLTHVEIK +DG+NWE SYNQ   +SCS+
Sbjct:    1 MESDMVIHNGGCHCRRVRWRVQAPSSVVAWNCNCSDCSMRGNIQFIVPSEKFELLGDSKEFLTTYTFGTHTAKHTFCKFCGITSFYVPRSHPDGVSITCRCVDPGTLTHVEIKHFDGQNWERSYNQT-FASCSQ 133

[Close]

BLAST of CV090484 vs. TrEMBL
Match: D7TUI2|D7TUI2_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_30.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00021786001 PE=4 SV=1)

HSP 1 Score: 238.81 bits (608), Expect = 2.277e-61
Identity = 102/138 (73.91%), Postives = 124/138 (89.86%), Query Frame = 3

Query:  132 KSSGMDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSK 545
            +SS MDS+ VVH+GGCHCR VRW+V++P+SV+ WKC+CS+C MRGN HFIVP+ +FELLGDSK+F+TTYTFGTHTA HTFCK+CGITSFY PRSN DGVAV+F CVDPGTLTHVEIK +DG+NWE+SY ++ I+SCSK
Sbjct:   57 ESSEMDSKKVVHSGGCHCRRVRWKVEAPASVLVWKCDCSNCFMRGNAHFIVPAEKFELLGDSKEFLTTYTFGTHTAKHTFCKICGITSFYIPRSNQDGVAVSFMCVDPGTLTHVEIKNFDGKNWENSYIESNIASCSK 194

[Close]

BLAST of CV090484 vs. TrEMBL
Match: A9P9C1|A9P9C1_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 231.876 bits (590), Expect = 2.783e-59
Identity = 102/136 (75.00%), Postives = 116/136 (85.29%), Query Frame = 3

Query:  144 MDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSKEG 551
            M+S+MV+H GGCHCR VRWRVQ+PSSVVAW CNCS CSMR +I FIVPS +FELLGDSK+F+TTYTFGTHTA HTFCK CGITSFY PRSNPDGV++T+ CVDPGTLTHVEIK +DG+NWE SYN+   SS    G
Sbjct:    1 MESDMVMHYGGCHCRRVRWRVQAPSSVVAWNCNCSICSMRASIQFIVPSEKFELLGDSKEFLTTYTFGTHTAKHTFCKFCGITSFYVPRSNPDGVSITYRCVDPGTLTHVEIKNFDGQNWERSYNETFASSSQGAG 136

[Close]

BLAST of CV090484 vs. TrEMBL
Match: B9GUR0|B9GUR0_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645200 PE=4 SV=1)

HSP 1 Score: 226.868 bits (577), Expect = 8.952e-58
Identity = 101/136 (74.26%), Postives = 115/136 (84.56%), Query Frame = 3

Query:  144 MDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSKEG 551
            M+S+MV+H GGCHCR VRWRVQ+PSSVVA  CNCS CSMR +I FIVPS +FELLGDSK+F+TTYTFGTHTA HTFCK CGITSFY PRSNPDGV++T+ CVDPGTLTHVEIK +DG+NWE SYN+   SS    G
Sbjct:    1 MESDMVMHYGGCHCRRVRWRVQAPSSVVALNCNCSICSMRASIQFIVPSEKFELLGDSKEFLTTYTFGTHTAKHTFCKFCGITSFYVPRSNPDGVSITYRCVDPGTLTHVEIKNFDGQNWERSYNETFASSSQGAG 136

[Close]

BLAST of CV090484 vs. TrEMBL
Match: Q9LFK7|Q9LFK7_ARATH (Putative uncharacterized protein At5g16940 OS=Arabidopsis thaliana GN=F2K13_90 PE=2 SV=1)

HSP 1 Score: 226.098 bits (575), Expect = 1.527e-57
Identity = 97/135 (71.85%), Postives = 112/135 (82.96%), Query Frame = 3

Query:  144 MDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSKE 548
            M+SE++ H GGCHC  ++WRV++  SV+AW CNCSDCSMRGN+HFIVPS  FELL DSK FITTYTFGTHTA HTFCKVCGITSFY PRSNPDGVAVT  CV  GTL H+E+K YDG+NWE S+ + GI+S SKE
Sbjct:    1 MESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKDFITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKSYDGQNWEMSHKKTGIASFSKE 135

[Close]

BLAST of CV090484 vs. TrEMBL
Match: A9P968|A9P968_POPTR (Putative uncharacterized protein OS=Populus trichocarpa PE=2 SV=1)

HSP 1 Score: 225.328 bits (573), Expect = 2.605e-57
Identity = 101/136 (74.26%), Postives = 114/136 (83.82%), Query Frame = 3

Query:  144 MDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSKEG 551
            M+S+MV+H GGCHCR VRWRVQ+PSSVVA  CNCS CSMR +I FIVPS +FELLGDSK+F+TTYTFGTHTA HTFCK CGITSFY PR+NPDG ++T  CVDPGTLTHVEIK +DG+NWE SYNQA  SS    G
Sbjct:    1 MESDMVMHYGGCHCRRVRWRVQAPSSVVALNCNCSICSMRASIQFIVPSEKFELLGDSKEFLTTYTFGTHTAKHTFCKFCGITSFYVPRANPDGFSITLRCVDPGTLTHVEIKNFDGQNWERSYNQAFASSSQGAG 136

[Close]

BLAST of CV090484 vs. TrEMBL
Match: D7M896|D7M896_ARALY (Carbon-sulfur lyase (Fragment) OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_488557 PE=4 SV=1)

HSP 1 Score: 217.624 bits (553), Expect = 5.431e-55
Identity = 94/123 (76.42%), Postives = 106/123 (86.18%), Query Frame = 3

Query:  144 MDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDS 512
            M+SE+++H GGCHC  V+WRV++ +SVVAW+CNCSDCSMRGN+HFIVPS  FELL DSK FITTYTFGTHTA HTFCKVCGITSFY PRSNPDGVAVT  CV  GTL HVE+K YDG+NWE S
Sbjct:    1 MESELILHEGGCHCGKVKWRVKAATSVVAWRCNCSDCSMRGNVHFIVPSSNFELLDDSKDFITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLDHVEVKSYDGQNWEVS 123

[Close]

BLAST of CV090484 vs. TrEMBL
Match: C5XC47|C5XC47_SORBI (Putative uncharacterized protein Sb02g024170 OS=Sorghum bicolor GN=Sb02g024170 PE=4 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.024e-53
Identity = 92/133 (69.17%), Postives = 109/133 (81.95%), Query Frame = 3

Query:  147 DSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSK 545
            D  ++VH GGCHCR VRWRV++P+SVVAW CNCSDC+MRGN HF+VP+ RF+L   + +FITTYTFGTHTA HTFCK CGITSFYTPRSNPDGVAVT  CVDPGTL HVE ++ DGRNWE+   ++ I+  SK
Sbjct:   11 DDVVLVHTGGCHCRRVRWRVEAPASVVAWVCNCSDCAMRGNTHFVVPAARFKLQAGAGEFITTYTFGTHTAKHTFCKACGITSFYTPRSNPDGVAVTVACVDPGTLDHVEYRKADGRNWEEWIKRSDIAGFSK 143

[Close]

BLAST of CV090484 vs. TrEMBL
Match: B6T550|B6T550_MAIZE (Proline-rich polypeptide 6 isoform 1 OS=Zea mays PE=2 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.024e-53
Identity = 90/131 (68.70%), Postives = 109/131 (83.21%), Query Frame = 3

Query:  156 MVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSKE 548
            +VVH GGCHCR +RW+V++P+SVVAW CNCSDCSMR N HFIVP+ +F+L   + +FITTYTFGTHTA HTFCK CGITSFYTPRSNPDGVA+T  CVDPGTL HVE +++DGRNWED +  + I+  SK+
Sbjct:    6 VVVHTGGCHCRRLRWQVEAPASVVAWICNCSDCSMRANTHFIVPAAKFKLQAGADEFITTYTFGTHTAKHTFCKTCGITSFYTPRSNPDGVAITVACVDPGTLKHVEYRKFDGRNWEDFFRTSDIAGFSKD 136

[Close]

BLAST of CV090484 vs. Vitis vinifera peptide
Match: GSVIVT01021786001 (assembled CDS)

HSP 1 Score: 238.81 bits (608), Expect = 1.164e-63
Identity = 102/138 (73.91%), Postives = 124/138 (89.86%), Query Frame = 3

Query:  132 KSSGMDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSK 545
            +SS MDS+ VVH+GGCHCR VRW+V++P+SV+ WKC+CS+C MRGN HFIVP+ +FELLGDSK+F+TTYTFGTHTA HTFCK+CGITSFY PRSN DGVAV+F CVDPGTLTHVEIK +DG+NWE+SY ++ I+SCSK
Sbjct:   57 ESSEMDSKKVVHSGGCHCRRVRWKVEAPASVLVWKCDCSNCFMRGNAHFIVPAEKFELLGDSKEFLTTYTFGTHTAKHTFCKICGITSFYIPRSNQDGVAVSFMCVDPGTLTHVEIKNFDGKNWENSYIESNIASCSK 194

[Close]

BLAST of CV090484 vs. TAIR peptide
Match: AT5G16940.2 (| Symbols: | carbon-sulfur lyases | chr5:5571797-5572204 REVERSE LENGTH=135)

HSP 1 Score: 226.098 bits (575), Expect = 1.135e-59
Identity = 97/135 (71.85%), Postives = 112/135 (82.96%), Query Frame = 3

Query:  144 MDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSKE 548
            M+SE++ H GGCHC  ++WRV++  SV+AW CNCSDCSMRGN+HFIVPS  FELL DSK FITTYTFGTHTA HTFCKVCGITSFY PRSNPDGVAVT  CV  GTL H+E+K YDG+NWE S+ + GI+S SKE
Sbjct:    1 MESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKDFITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKSYDGQNWEMSHKKTGIASFSKE 135

[Close]

BLAST of CV090484 vs. TAIR peptide
Match: AT5G16940.1 (| Symbols: | carbon-sulfur lyases | chr5:5571797-5572204 REVERSE LENGTH=135)

HSP 1 Score: 226.098 bits (575), Expect = 1.135e-59
Identity = 97/135 (71.85%), Postives = 112/135 (82.96%), Query Frame = 3

Query:  144 MDSEMVVHNGGCHCRSVRWRVQSPSSVVAWKCNCSDCSMRGNIHFIVPSGRFELLGDSKQFITTYTFGTHTANHTFCKVCGITSFYTPRSNPDGVAVTFTCVDPGTLTHVEIKQYDGRNWEDSYNQAGISSCSKE 548
            M+SE++ H GGCHC  ++WRV++  SV+AW CNCSDCSMRGN+HFIVPS  FELL DSK FITTYTFGTHTA HTFCKVCGITSFY PRSNPDGVAVT  CV  GTL H+E+K YDG+NWE S+ + GI+S SKE
Sbjct:    1 MESELIFHEGGCHCGKIKWRVKAARSVIAWSCNCSDCSMRGNVHFIVPSSNFELLDDSKDFITTYTFGTHTAKHTFCKVCGITSFYIPRSNPDGVAVTVKCVKSGTLAHIEVKSYDGQNWEMSHKKTGIASFSKE 135

The following BLAST results are available for this feature:

BLAST of CV090484 vs. DB:swissprot:display
BLAST of CV090484 vs. Populus trichocarpa peptide v2.0
BLAST of CV090484 vs. P. persica 1.0 peptide
BLAST of CV090484 vs. TrEMBL
BLAST of CV090484 vs. Vitis vinifera peptide
BLAST of CV090484 vs. TAIR peptide

BLAST of CV090484 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 2


Match Name	E-value	Identity	Description
CENPV_MOUSE	4.310e-31	47.73	Centromere protein V OS=Mus musculus GN=Cenpv PE=2...	[more]
CENPV_HUMAN	7.352e-31	46.97	Centromere protein V OS=Homo sapiens GN=CENPV PE=1...	[more]

BLAST of CV090484 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 3


Match Name	E-value	Identity
POPTR_0017s02700.1	4.720e-70	85.07	[more]
POPTR_0293s00210.1	3.870e-64	79.10	[more]
POPTR_0017s02690.1	7.553e-60	74.26	[more]

BLAST of CV090484 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa013190m	1.453e-65	78.36		[more]

BLAST of CV090484 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
B9GUR1\|B9GUR1_POPTR	1.246e-67	84.33	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9GUQ5\|B9GUQ5_POPTR	4.587e-62	79.10	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
D7TUI2\|D7TUI2_VITVI	2.277e-61	73.91	Whole genome shotgun sequence of line PN40024, sca...	[more]
A9P9C1\|A9P9C1_POPTR	2.783e-59	75.00	Putative uncharacterized protein OS=Populus tricho...	[more]
B9GUR0\|B9GUR0_POPTR	8.952e-58	74.26	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
Q9LFK7\|Q9LFK7_ARATH	1.527e-57	71.85	Putative uncharacterized protein At5g16940 OS=Arab...	[more]
A9P968\|A9P968_POPTR	2.605e-57	74.26	Putative uncharacterized protein OS=Populus tricho...	[more]
D7M896\|D7M896_ARALY	5.431e-55	76.42	Carbon-sulfur lyase (Fragment) OS=Arabidopsis lyra...	[more]
C5XC47\|C5XC47_SORBI	1.024e-53	69.17	Putative uncharacterized protein Sb02g024170 OS=So...	[more]
B6T550\|B6T550_MAIZE	1.024e-53	68.70	Proline-rich polypeptide 6 isoform 1 OS=Zea mays P...	[more]

BLAST of CV090484 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01021786001	1.164e-63	73.91	assembled CDS	[more]

BLAST of CV090484 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT5G16940.2	1.135e-59	71.85	\| Symbols: \| carbon-sulfur lyases \| chr5:5571797-...	[more]
AT5G16940.1	1.135e-59	71.85	\| Symbols: \| carbon-sulfur lyases \| chr5:5571797-...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006913	Glutathione-dependent formaldehyde-activating, GFA	PFAM	PF04828	GFA	coord: 46..121 score: 6
IPR011057	Mss4-like	SUPERFAMILY	51316	Mss4-like	coord: 16..118 score: 1.3
None	No IPR available	GENE3D	3.90.1590.10	no description	coord: 8..121 score: 1.7

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV090484 ID=CV090484; Name=CV090484; organism=Vaccinium corymbosum; type=EST; length=607bp
GATCAGCATCACAAATGAGGAATTTTCTGCTAAGCTTTTGGATTTTTGGA
TTCGAAAGCTTTCCATTAAGATGTTGGTCACACTTGGTCGAGCAATGAGG
GAATTCATTAAGACATTTCTTTTGGCAGAAAAAGTCCTCGGGCATGGATT
CGGAGATGGTGGTGCACAATGGCGGATGTCACTGCAGAAGTGTGAGATGG
CGAGTCCAATCCCCTTCGAGTGTCGTAGCCTGGAAATGCAACTGCAGTGA
CTGTTCCATGAGAGGAAACATTCACTTCATTGTCCCTTCAGGAAGGTTCG
AACTTTTAGGAGATTCGAAACAGTTCATTACGACCTACACCTTTGGCACT
CACACAGCAAATCACACTTTCTGTAAGGTGTGTGGCATAACCTCGTTTTA
TACACCGCGATCAAATCCAGATGGGGTAGCTGTTACATTTACGTGTGTTG
ATCCTGGAACACTAACCCATGTTGAGATTAAGCAGTATGATGGAAGGAAT
TGGGAGGACTCATACAACCAGGCTGGCATTTCATCGTGTTCGAAAGAGGG
GAAATGAGTTTCCCTGGACAAATTACCTGGTTGAATAGCTTTGCTGAGAT
TTGAATC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Biological Process**
Term	Definition
GO:0008152	metabolic process

Vocabulary: **Molecular Function**
Term	Definition
GO:0016846	carbon-sulfur lyase activity

Vocabulary: **INTERPRO**
Term	Definition
IPR006913	CENP-V/GFA
IPR011057	Mss4-like_sf
noIPR	unintegrated