CV091018 | GDV

EST Overview


Name	CV091018
Unique Name	CV091018
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	730

Libraries


Library Name	Type
LIBEST_014531 cDNA non acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV091018 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s04330.1 ()

HSP 1 Score: 53.5286 bits (127), Expect = 1.558e-7
Identity = 26/78 (33.33%), Postives = 38/78 (48.72%), Query Frame = -3

Query:  450 DAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPL---AWQVLRLS 674
            D  +K+WR +  L IP KI+ FLWR C + + T      + I  +  C   G A E+  H+F  C      WQ + L+
Sbjct:   47 DNSDKKWRRLWNLKIPPKIKLFLWRSCQDCIPTRARLLQKGIEVNDVCVFYGSAGETQEHVFVHCSFVKCCWQKIGLT 124

[Close]

BLAST of CV091018 vs. P. persica 1.0 peptide
Match: ppa022315m ()

HSP 1 Score: 60.8474 bits (146), Expect = 4.454e-13
Identity = 30/90 (33.33%), Postives = 46/90 (51.11%), Query Frame = -3

Query:  429 STSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPL---AWQVLRLSFVNVNFG 689
            S+S+ DA  + W  + +  +P +++ F WR    IL T      +K+  D  C +C G +ES++HI  DCP    AW+   LS    N G
Sbjct:   81 SSSNSDAVARNWSLLWKAIVPARVKTFWWRVISGILPTKANLARKKVSLDEECMLCEGPVESSIHILRDCPFAICAWRSSTLSSSRWNNG 170

HSP 2 Score: 25.409 bits (54), Expect = 4.454e-13
Identity = 10/33 (30.30%), Postives = 17/33 (51.52%), Query Frame = -2

Query:  247 WQMWKARNKTCFEQQVTLPRVIGKRAVDRLNEF 345
            W +W+ARN   +  + + P  +   A  RL +F
Sbjct:  198 WAIWEARNGLLWNNKKSRPEQVSLHASLRLQDF 230

HSP 3 Score: 24.6386 bits (52), Expect = 4.454e-13
Identity = 10/20 (50.00%), Postives = 15/20 (75.00%), Query Frame = -1

Query:   92 LNVDGAWKVETLKGVLMVLL 151
            +NVDGAWK  T +G + V++
Sbjct:  261 INVDGAWKPGTTEGGVGVVV 280

[Close]

BLAST of CV091018 vs. P. persica 1.0 peptide
Match: ppa020120m ()

HSP 1 Score: 64.3142 bits (155), Expect = 6.225e-11
Identity = 26/73 (35.62%), Postives = 41/73 (56.16%), Query Frame = -3

Query:  471 STSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPLA 689
            S+S+ DA  + W  + +  +P +++ F WR    IL T      +K+  D  C +C G +ES++HI CDCP A
Sbjct:  926 SSSNSDAVARNWSLLWKAIVPARVKTFWWRVISGILPTKANLARKKVSLDEECMLCEGPVESSIHILCDCPFA 998

[Close]

BLAST of CV091018 vs. P. persica 1.0 peptide
Match: ppa025352m ()

HSP 1 Score: 63.5438 bits (153), Expect = 1.062e-10
Identity = 34/117 (29.06%), Postives = 56/117 (47.86%), Query Frame = -3

Query:  342 GSTSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPLAWQVLRLSFVNVNFGQILTPFSAMGCFGSAMASCAKQRKAFIIG 692
            GS+S   A+   WR +  L IP+K+  F WR  H+          RKI++D +CPIC    E+ +H+   CP A +V +     V F ++      +  +G    +C+K+ +    G
Sbjct:   92 GSSSDPRAQNSFWRKVWSLEIPQKLIFFNWRAIHKSRPCKANLLKRKIVSDDACPICIVNSENLIHVVWSCPGAQKVWK----KVRFMEVFKGLQ-LSTYGDFFEACSKKEEMIFNG 203

[Close]

BLAST of CV091018 vs. P. persica 1.0 peptide
Match: ppb019389m ()

HSP 1 Score: 63.1586 bits (152), Expect = 1.387e-10
Identity = 35/96 (36.46%), Postives = 50/96 (52.08%), Query Frame = -3

Query:  453 LEQHGQFQDANDGSTSSEDAEEK-RWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPLA---WQVLRL 728
            LE    F+     +  +E A  K  W+ + RL +P KI+ FLW  CH  L TN +   R +   P+CP C   ME+  H+F DCPL+   W  L++
Sbjct:  550 LEADSSFEHDGLEAVEAEHASVKWDWQFLWRLRLPPKIKTFLWIVCHRKLLTNVQRQKRGLTQAPACPRCDYPMETIAHLFKDCPLSLTIWNCLQI 645

[Close]

BLAST of CV091018 vs. P. persica 1.0 peptide
Match: ppa024042m ()

HSP 1 Score: 63.1586 bits (152), Expect = 1.387e-10
Identity = 29/64 (45.31%), Postives = 36/64 (56.25%), Query Frame = -3

Query:  471 KRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPLA 662
            K W ++R+  IP KI+ F WR C  IL T      RKI  D  C +CG  MEST+H+   CP A
Sbjct:   14 KGWTALRKAKIPGKIKLFWWRACTGILPTKDNLWKRKIHLDTCCDLCGVEMESTLHVLWHCPFA 77

[Close]

BLAST of CV091018 vs. P. persica 1.0 peptide
Match: ppa024018m ()

HSP 1 Score: 62.7734 bits (151), Expect = 1.811e-10
Identity = 32/86 (37.21%), Postives = 45/86 (52.33%), Query Frame = -3

Query:  471 LEQHGQFQDANDGSTSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPLA 728
            L  +G+     +G +S+  A+    +S+  L  P KI+ FLWRCC  ILA  G    R+I  +  CP  G   E+ VHIF  C +A
Sbjct:  114 LRWNGELGRKEEGESSNPIAQSGLGKSLWALQAPPKIRLFLWRCCRNILAVRGNLRSRRIDVENGCPFYGQEEETQVHIFFRCQIA 199

[Close]

BLAST of CV091018 vs. P. persica 1.0 peptide
Match: ppb016510m ()

HSP 1 Score: 62.7734 bits (151), Expect = 1.811e-10
Identity = 31/90 (34.44%), Postives = 46/90 (51.11%), Query Frame = -3

Query:  429 STSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPL---AWQVLRLSFVNVNFG 689
            S+S+ DA  + W  + +  +P ++  F WR    IL TN     +K+  D  C +C G +ES++HI  DCP    AW+   LS    N G
Sbjct:  164 SSSNSDAVARNWSLLWKAIVPARVNTFWWRVISGILPTNANLARKKVSLDEECMLCEGPVESSIHILRDCPFAICAWRSSTLSSSRWNNG 253

[Close]

BLAST of CV091018 vs. P. persica 1.0 peptide
Match: ppa018217m ()

HSP 1 Score: 62.003 bits (149), Expect = 3.089e-10
Identity = 30/73 (41.10%), Postives = 40/73 (54.79%), Query Frame = -3

Query:  471 STSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPLA 689
            S+S+ +   K W ++ +  IP KI+ F WR C  IL T      RKI  D  C +CG  MEST+H+   CP A
Sbjct:   58 SSSTGNGFIKGWTALWKAKIPGKIKLFWWRACTGILTTKDNLWKRKIHLDTCCELCGAEMESTLHVLWYCPFA 130

[Close]

BLAST of CV091018 vs. P. persica 1.0 peptide
Match: ppa024202m ()

HSP 1 Score: 60.077 bits (144), Expect = 1.174e-9
Identity = 30/91 (32.97%), Postives = 47/91 (51.65%), Query Frame = -3

Query:  450 HGQFQDANDGST-SSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPLAWQVLRLS 719
            H +  D  DG   +S +  +  W  + R+ +  K++ FLWRC HEIL        +++I++P C  C  A E  +H   DCP A +V + S
Sbjct:  978 HYEKIDHKDGEVGASSNNLDNIWLRLWRMQVATKVKVFLWRCMHEILPCRANLSLKRVISNPICFWCHQASEIVLHALWDCPAAREVWQFS 1068

[Close]

BLAST of CV091018 vs. P. persica 1.0 peptide
Match: ppa014760m ()

HSP 1 Score: 59.6918 bits (143), Expect = 1.533e-9
Identity = 28/77 (36.36%), Postives = 38/77 (49.35%), Query Frame = -3

Query:  462 GSTSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPLAWQV 692
            GS+S    +   WR +    +P+KI +F WR     L        RKII++ SCPIC    ES +H    CP A +V
Sbjct:  131 GSSSEPRVQNAFWRKVWSQEVPQKILYFTWRAIKNYLPCRSNLLKRKIISEDSCPICNVNSESVIHALWSCPNAQKV 207

[Close]

BLAST of CV091018 vs. TrEMBL
Match: B9G5C7|B9G5C7_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_31232 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.039e-8
Identity = 29/83 (34.94%), Postives = 41/83 (49.40%), Query Frame = -3

Query:  453 GSTSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDC---PLAWQVLRL 692
            G ++ E  ++  W+ + +L +P KI+HFLWR CH  LA       R +  D  C +CG   E   H+F  C      WQ L L
Sbjct: 1263 GVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNL 1345

HSP 2 Score: 22.7126 bits (47), Expect = 1.039e-8
Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = -2

Query:  319 FCDGKLRQTKKGFHHWQMWKARNK 390
            +C  ++ +T      WQ WK RN+
Sbjct: 1366 YCRPEIERTSAIVCLWQWWKERNE 1389

[Close]

BLAST of CV091018 vs. TrEMBL
Match: B9EWU4|B9EWU4_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_01823 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.068e-8
Identity = 29/83 (34.94%), Postives = 41/83 (49.40%), Query Frame = -3

Query:  453 GSTSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDC---PLAWQVLRL 692
            G ++ E  ++  W+ + +L +P KI+HFLWR CH  LA       R +  D  C +CG   E   H+F  C      WQ L L
Sbjct:  230 GVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNL 312

HSP 2 Score: 22.7126 bits (47), Expect = 1.068e-8
Identity = 8/24 (33.33%), Postives = 13/24 (54.17%), Query Frame = -2

Query:  319 FCDGKLRQTKKGFHHWQMWKARNK 390
            +C  ++ +T      WQ WK RN+
Sbjct:  333 YCRPEIERTSAIVCLWQWWKERNE 356

[Close]

BLAST of CV091018 vs. TrEMBL
Match: A2Q168|A2Q168_MEDTR (RNA-directed DNA polymerase (Reverse transcriptase) (Fragment) OS=Medicago truncatula GN=MtrDRAFT_AC148290g28v2 PE=4 SV=1)

HSP 1 Score: 55.4546 bits (132), Expect = 2.284e-8
Identity = 29/89 (32.58%), Postives = 43/89 (48.31%), Query Frame = -3

Query:  414 SEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPLAWQVLRLSFVNVNFGQILTP 680
            S    +K W+ I R  IP  I++F+WR    IL T      + II D  CP+C    ES+ H+F  C     +++LS    + G  + P
Sbjct: 1008 SNPQRDKLWKEIWRAFIPNNIKNFMWRLAKNILPTRANLQKKGIILDTFCPLCYCEQESSHHLFLKC----NMMKLSLFASHLGSHIPP 1092

HSP 2 Score: 27.7202 bits (60), Expect = 2.284e-8
Identity = 12/37 (32.43%), Postives = 19/37 (51.35%), Query Frame = -2

Query:  235 WQMWKARNKTCFEQQVTLPRVIGKRAVDRLNEFRTAN 345
            W+ W ARN   F+     P ++   A+  ++EF  AN
Sbjct: 1120 WKFWAARNAAVFKGSPLDPSLLAADAMCFVHEFNEAN 1156

[Close]

BLAST of CV091018 vs. TrEMBL
Match: Q2QQV8|Q2QQV8_ORYSJ (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os12g29700 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 3.808e-8
Identity = 29/83 (34.94%), Postives = 41/83 (49.40%), Query Frame = -3

Query:  453 GSTSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDC---PLAWQVLRL 692
            G ++ E  ++  W+ + +L +P KI+HFLWR CH  LA       R +  D  C +CG   E   H+F  C      WQ L L
Sbjct: 1290 GVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNL 1372

HSP 2 Score: 20.7866 bits (42), Expect = 3.808e-8
Identity = 6/9 (66.67%), Postives = 7/9 (77.78%), Query Frame = -2

Query:  319 WQMWKARNK 345
            WQ WK RN+
Sbjct: 1408 WQWWKERNE 1416

[Close]

BLAST of CV091018 vs. TrEMBL
Match: Q8S6P1|Q8S6P1_ORYSJ (Putative reverse transcriptase OS=Oryza sativa subsp. japonica GN=OSJNBa0073L01.7 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 3.816e-8
Identity = 29/83 (34.94%), Postives = 41/83 (49.40%), Query Frame = -3

Query:  453 GSTSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDC---PLAWQVLRL 692
            G ++ E  ++  W+ + +L +P KI+HFLWR CH  LA       R +  D  C +CG   E   H+F  C      WQ L L
Sbjct: 1235 GVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNL 1317

HSP 2 Score: 20.7866 bits (42), Expect = 3.816e-8
Identity = 6/9 (66.67%), Postives = 7/9 (77.78%), Query Frame = -2

Query:  319 WQMWKARNK 345
            WQ WK RN+
Sbjct: 1353 WQWWKERNE 1361

[Close]

BLAST of CV091018 vs. TrEMBL
Match: Q7G3D9|Q7G3D9_ORYSJ (Retrotransposon protein, putative, unclassified OS=Oryza sativa subsp. japonica GN=LOC_Os10g21850 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 3.817e-8
Identity = 29/83 (34.94%), Postives = 41/83 (49.40%), Query Frame = -3

Query:  453 GSTSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDC---PLAWQVLRL 692
            G ++ E  ++  W+ + +L +P KI+HFLWR CH  LA       R +  D  C +CG   E   H+F  C      WQ L L
Sbjct: 1231 GVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNL 1313

HSP 2 Score: 20.7866 bits (42), Expect = 3.817e-8
Identity = 6/9 (66.67%), Postives = 7/9 (77.78%), Query Frame = -2

Query:  319 WQMWKARNK 345
            WQ WK RN+
Sbjct: 1349 WQWWKERNE 1357

[Close]

BLAST of CV091018 vs. TrEMBL
Match: B8B800|B8B800_ORYSI (Putative uncharacterized protein OS=Oryza sativa subsp. indica GN=OsI_25211 PE=4 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 3.938e-8
Identity = 29/83 (34.94%), Postives = 41/83 (49.40%), Query Frame = -3

Query:  453 GSTSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDC---PLAWQVLRL 692
            G ++ E  ++  W+ + +L +P KI+HFLWR CH  LA       R +  D  C +CG   E   H+F  C      WQ L L
Sbjct:  230 GVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALNL 312

HSP 2 Score: 20.7866 bits (42), Expect = 3.938e-8
Identity = 6/9 (66.67%), Postives = 7/9 (77.78%), Query Frame = -2

Query:  319 WQMWKARNK 345
            WQ WK RN+
Sbjct:  348 WQWWKERNE 356

[Close]

BLAST of CV091018 vs. TrEMBL
Match: Q9SHP2|Q9SHP2_ARATH (Putative non-LTR retroelement reverse transcriptase OS=Arabidopsis thaliana GN=At2g17610 PE=2 SV=1)

HSP 1 Score: 55.8398 bits (133), Expect = 1.851e-7
Identity = 30/102 (29.41%), Postives = 48/102 (47.06%), Query Frame = -3

Query:  420 EQHGQFQDANDGSTSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPLAWQVLRLSFVNVNFGQIL 725
            +QH      N+ S  +       + +I + N P KI+HF WR  H  L T G    R++ITD +C  CG A E   H+   C ++ ++   + + +  G  L
Sbjct:  481 QQHASLPSPNEVSAQTV------FTNIWKQNAPPKIKHFWWRSAHNALPTAGNLKRRRLITDDTCQRCGEASEDVNHLLFQCRVSKEIWEQAHIKLCPGDSL 576

HSP 2 Score: 24.2534 bits (51), Expect = 1.851e-7
Identity = 11/33 (33.33%), Postives = 19/33 (57.58%), Query Frame = -2

Query:  259 FHHWQMWKARNKTCF-EQQVTLPRVIGKRAVDR 354
            F  W++WK RN   F  ++ ++P  I K  +D+
Sbjct:  604 FIGWRIWKMRNDLIFNNKRWSIPDSIQKALIDQ 636

[Close]

BLAST of CV091018 vs. TrEMBL
Match: Q01M84|Q01M84_ORYSA (OSIGBa0135L04.5 protein OS=Oryza sativa GN=OSIGBa0135L04.5 PE=4 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 4.879e-7
Identity = 30/91 (32.97%), Postives = 44/91 (48.35%), Query Frame = -3

Query:  450 QFQDANDGSTSSEDAEEKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPLA---WQVLRLS 713
            Q    ++GS SSE    K W  + + N+P+K++ F WR     LAT      RK+    +C ICG   E   H  C CP A   W  ++++
Sbjct:  263 QLAAIDNGSGSSEAETSKAWNLVWKCNVPQKVKVFTWRAATNSLATMENKNKRKLEATGTCGICGVEAEDVAHALCRCPQAKKMWDAMQVA 353

[Close]

BLAST of CV091018 vs. TAIR peptide
Match: AT3G09510.1 (| Symbols: | Ribonuclease H-like superfamily protein | chr3:2921804-2923258 FORWARD LENGTH=484)

HSP 1 Score: 51.9878 bits (123), Expect = 2.135e-8
Identity = 29/77 (37.66%), Postives = 38/77 (49.35%), Query Frame = -3

Query:  417 IRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPLAWQVLRLSFVNVNFGQILT 647
            I  L I  K++HFLWR   + LAT      R +  DPSCP C    ES  H    CP A    RLS  ++   Q+++
Sbjct:  162 IWNLPIMPKLKHFLWRALSQALATTERLTTRGMRIDPSCPRCHRENESINHALFTCPFATMAWRLSDSSLIRNQLMS 238

HSP 2 Score: 23.8682 bits (50), Expect = 2.135e-8
Identity = 7/14 (50.00%), Postives = 10/14 (71.43%), Query Frame = -2

Query:  304 WQMWKARNKTCFEQ 345
            W++WKARN   F +
Sbjct:  270 WRIWKARNNVVFNK 283

[Close]

BLAST of CV091018 vs. TAIR peptide
Match: AT4G29090.1 (| Symbols: | Ribonuclease H-like superfamily protein | chr4:14333528-14335255 FORWARD LENGTH=575)

HSP 1 Score: 43.1282 bits (100), Expect = 4.717e-7
Identity = 22/79 (27.85%), Postives = 34/79 (43.04%), Query Frame = -3

Query:  429 EKRWRSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPLAWQVLRLSFVNVNFG 665
            +K W+S        KIQHFLW+C    L   G   +R +  + +C  C    E+  H+   C  A     +S + +  G
Sbjct:  255 QKIWKS----QTSPKIQHFLWKCLSNSLPVAGALAYRHLSKESACIRCPSCKETVNHLLFKCTFARLTWAISSIPIPLG 329

HSP 2 Score: 28.1054 bits (61), Expect = 4.717e-7
Identity = 12/34 (35.29%), Postives = 20/34 (58.82%), Query Frame = -2

Query:  244 WQMWKARNKTCFEQQVTLPRVIGKRAVDRLNEFR 345
            W++WK RN+  F  +    + + +RA D L E+R
Sbjct:  365 WRLWKNRNELVFRGREFNAQEVLRRAEDDLEEWR 398

[Close]

BLAST of CV091018 vs. TAIR peptide
Match: AT2G02650.1 (| Symbols: | Ribonuclease H-like superfamily protein | chr2:735411-736546 FORWARD LENGTH=365)

HSP 1 Score: 51.6026 bits (122), Expect = 5.154e-7
Identity = 27/66 (40.91%), Postives = 35/66 (53.03%), Query Frame = -3

Query:  456 RSIRRLNIPRKIQHFLWRCCHEILATNGEFCWRKIITDPSCPICGGAMESTVHIFCDCPLAWQVLR 653
            ++I +L++  KI+HFLWRC    LATN     R I  DP C  C    E+  HI  +CP    V R
Sbjct:   35 QAIWKLHVAPKIKHFLWRCVTGALATNTRLRSRNIDADPICQRCCIEEETIHHIMFNCPYTQSVWR 100

The following BLAST results are available for this feature:

BLAST of CV091018 vs. Populus trichocarpa peptide v2.0
BLAST of CV091018 vs. P. persica 1.0 peptide
BLAST of CV091018 vs. TrEMBL
BLAST of CV091018 vs. TAIR peptide

BLAST of CV091018 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
POPTR_0002s04330.1	1.558e-7	33.33		[more]

BLAST of CV091018 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 10


Match Name	E-value	Identity
ppa022315m	4.454e-13	33.33	[more]
ppa020120m	6.225e-11	35.62	[more]
ppa025352m	1.062e-10	29.06	[more]
ppb019389m	1.387e-10	36.46	[more]
ppa024042m	1.387e-10	45.31	[more]
ppa024018m	1.811e-10	37.21	[more]
ppb016510m	1.811e-10	34.44	[more]
ppa018217m	3.089e-10	41.10	[more]
ppa024202m	1.174e-9	32.97	[more]
ppa014760m	1.533e-9	36.36	[more]

BLAST of CV091018 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 9


Match Name	E-value	Identity	Description
B9G5C7\|B9G5C7_ORYSJ	1.039e-8	34.94	Putative uncharacterized protein OS=Oryza sativa s...	[more]
B9EWU4\|B9EWU4_ORYSJ	1.068e-8	34.94	Putative uncharacterized protein OS=Oryza sativa s...	[more]
A2Q168\|A2Q168_MEDTR	2.284e-8	32.58	RNA-directed DNA polymerase (Reverse transcriptase...	[more]
Q2QQV8\|Q2QQV8_ORYSJ	3.808e-8	34.94	Retrotransposon protein, putative, unclassified OS...	[more]
Q8S6P1\|Q8S6P1_ORYSJ	3.816e-8	34.94	Putative reverse transcriptase OS=Oryza sativa sub...	[more]
Q7G3D9\|Q7G3D9_ORYSJ	3.817e-8	34.94	Retrotransposon protein, putative, unclassified OS...	[more]
B8B800\|B8B800_ORYSI	3.938e-8	34.94	Putative uncharacterized protein OS=Oryza sativa s...	[more]
Q9SHP2\|Q9SHP2_ARATH	1.851e-7	29.41	Putative non-LTR retroelement reverse transcriptas...	[more]
Q01M84\|Q01M84_ORYSA	4.879e-7	32.97	OSIGBa0135L04.5 protein OS=Oryza sativa GN=OSIGBa0...	[more]

BLAST of CV091018 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3


Match Name	E-value	Identity	Description
AT3G09510.1	2.135e-8	37.66	\| Symbols: \| Ribonuclease H-like superfamily prot...	[more]
AT4G29090.1	4.717e-7	27.85	\| Symbols: \| Ribonuclease H-like superfamily prot...	[more]
AT2G02650.1	5.154e-7	40.91	\| Symbols: \| Ribonuclease H-like superfamily prot...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR015706	RNA-directed DNA polymerase (reverse transcriptase)	PANTHER	PTHR19446	REVERSE TRANSCRIPTASES	coord: 16..106 score: 4.6
None	No IPR available	PANTHER	PTHR19446:SF34	NON-LTR RETROELEMENT REVERSE TRANSCRIPTASE RELATED	coord: 16..106 score: 4.6

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV091018 ID=CV091018; Name=CV091018; organism=Vaccinium corymbosum; type=EST; length=730bp
GGAAGGATCGATGGGCGCTCTACGATATTGGGGCTGGAATACCCTAGGAG
TCACTCCATAGTAGCAGCAGTGAACTGTCCCCTGCTATTCCGAGCAACAC
CATCAGAACCCCTTTCAGTGTCTCTACTTTCCATGCTCCATCCACGTTGA
GATTTTAGTTAAAGCACCCAACGGTCGTTGTCACTGACTATCATCTGGAT
TACCACCAGTGGCCAAAGGGACTATGGCCGTCTGGTTTGCCGTTCTAAAC
TCGTTGAGCCTGTCAACTGCTCGCTTACCAATCACCCTAGGCAGCGTTAC
TTGTTGCTCGAAACATGTCTTGTTCCTTGCTTTCCACATCTGCCAATGAT
GAAAGCCTTTCTTTGTTTGGCGCAGCTTGCCATCGCAGAACCAAAGCATC
CCATAGCCGAAAAAGGAGTTAAAATTTGACCAAAGTTCACATTTACAAAA
GAGAGCCTCAATACCTGCCATGCCAACGGGCAATCACAGAAAATATGCAC
AGTTGATTCCATCGCTCCTCCGCATATTGGGCAACTTGGGTCAGTTATGA
TCTTTCTCCAACAAAACTCCCCGTTTGTGGCTAATATCTCATGACAACAT
CGCCAAAGAAAATGCTGAATCTTCCTTGGGATGTTGAGTCGCCTGATGGA
CCTCCATCTTTTCTCCTCAGCATCCTCGGAACTGGTGCTCCCATCATTAG
CATCTTGAAACTGCCCATGTTGCTCTAAGT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
IPR015706	RNA-directed DNA polymerase (reverse transcriptase)
noIPR	unintegrated