CV091036 | GDV

EST Overview


Name	CV091036
Unique Name	CV091036
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	747

Libraries


Library Name	Type
LIBEST_014531 cDNA non acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18
KEGG analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

[Close]

BLAST of CV091036 vs. DB:swissprot:display
Match: IF1A_ONOVI (Eukaryotic translation initiation factor 1A OS=Onobrychis viciifolia PE=2 SV=2)

HSP 1 Score: 198.364 bits (503), Expect = 3.600e-50
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADD+KRELVFKEDGQEYAQVLRMLGNGRCEA CIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILK MPDEARLLKAYGELP+NTRLN
Sbjct:   18 EADDDKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKLMPDEARLLKAYGELPDNTRLN 116

[Close]

BLAST of CV091036 vs. DB:swissprot:display
Match: IF1A_WHEAT (Eukaryotic translation initiation factor 1A OS=Triticum aestivum PE=1 SV=2)

HSP 1 Score: 191.045 bits (484), Expect = 5.748e-48
Identity = 90/99 (90.91%), Postives = 94/99 (94.95%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADD+KRELVFKEDGQEYAQV RMLGNGRCEA C+DGTKRLCHIRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELP+  RLN
Sbjct:   18 EADDDKRELVFKEDGQEYAQVTRMLGNGRCEAICVDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMNDEARLLKAYGELPDTVRLN 116

[Close]

BLAST of CV091036 vs. DB:swissprot:display
Match: IF1AY_PANTR (Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Pan troglodytes GN=EIF1AY PE=2 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 2.859e-39
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            E + EKRELVFKEDGQEYAQV++MLGNGR EA C DG KRLCHIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of CV091036 vs. DB:swissprot:display
Match: IF1AY_HUMAN (Eukaryotic translation initiation factor 1A, Y-chromosomal OS=Homo sapiens GN=EIF1AY PE=1 SV=4)

HSP 1 Score: 162.155 bits (409), Expect = 2.859e-39
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            E + EKRELVFKEDGQEYAQV++MLGNGR EA C DG KRLCHIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEALCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of CV091036 vs. DB:swissprot:display
Match: IF1AX_PONAB (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Pongo abelii GN=EIF1AX PE=2 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 2.859e-39
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            E + EKRELVFKEDGQEYAQV++MLGNGR EA C DG KRLCHIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of CV091036 vs. DB:swissprot:display
Match: IF1AX_MOUSE (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Mus musculus GN=Eif1ay PE=2 SV=3)

HSP 1 Score: 162.155 bits (409), Expect = 2.859e-39
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            E + EKRELVFKEDGQEYAQV++MLGNGR EA C DG KRLCHIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of CV091036 vs. DB:swissprot:display
Match: IF1AX_HUMAN (Eukaryotic translation initiation factor 1A, X-chromosomal OS=Homo sapiens GN=EIF1AX PE=1 SV=2)

HSP 1 Score: 162.155 bits (409), Expect = 2.859e-39
Identity = 77/99 (77.78%), Postives = 85/99 (85.86%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            E + EKRELVFKEDGQEYAQV++MLGNGR EA C DG KRLCHIRGK+ KKVWI   DIILVGLRDYQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVKRLCHIRGKLRKKVWINTSDIILVGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of CV091036 vs. DB:swissprot:display
Match: IF1A_RAT (Eukaryotic translation initiation factor 1A OS=Rattus norvegicus GN=Eif1a PE=2 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 8.320e-39
Identity = 75/99 (75.76%), Postives = 85/99 (85.86%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            E + EKRELVFKEDGQEYAQV++MLGNGR EA C DG +RLCHIRGK+ KKVWI   DIIL+GLRDYQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of CV091036 vs. DB:swissprot:display
Match: IF1A_MOUSE (Eukaryotic translation initiation factor 1A OS=Mus musculus GN=Eif1a PE=2 SV=3)

HSP 1 Score: 160.614 bits (405), Expect = 8.320e-39
Identity = 75/99 (75.76%), Postives = 85/99 (85.86%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            E + EKRELVFKEDGQEYAQV++MLGNGR EA C DG +RLCHIRGK+ KKVWI   DIIL+GLRDYQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMCFDGVRRLCHIRGKLRKKVWINTSDIILIGLRDYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of CV091036 vs. DB:swissprot:display
Match: IF1A_RABIT (Eukaryotic translation initiation factor 1A OS=Oryctolagus cuniculus GN=EIF1A PE=1 SV=2)

HSP 1 Score: 152.525 bits (384), Expect = 2.266e-36
Identity = 74/99 (74.75%), Postives = 83/99 (83.84%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            E + EKRELVFKEDGQEYAQV++MLGNGR EA   DG KRL HIRGK+ KKVWI   DIILVGLR+YQD+KADVILKY  DEAR LKAYGELPE+ ++N
Sbjct:   18 ENESEKRELVFKEDGQEYAQVIKMLGNGRLEAMLFDGVKRLFHIRGKLRKKVWINTSDIILVGLREYQDNKADVILKYNADEARSLKAYGELPEHAKIN 116

[Close]

BLAST of CV091036 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s21870.1 ()

HSP 1 Score: 205.682 bits (522), Expect = 2.546e-53
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKREL+FKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN
Sbjct:   18 EADDEKRELIFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 116

[Close]

BLAST of CV091036 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s15910.1 ()

HSP 1 Score: 203.371 bits (516), Expect = 1.264e-52
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKREL+FKEDGQEYAQVLRMLGNGRCEA CIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN
Sbjct:   18 EADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 116

[Close]

BLAST of CV091036 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s03310.1 ()

HSP 1 Score: 171.014 bits (432), Expect = 6.950e-43
Identity = 82/99 (82.83%), Postives = 88/99 (88.89%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EA   KREL+FKE+GQEYAQVLRMLGNGRC+A C DGTKRLCHIRGKMH+KVWI AGDIILVGLRDYQD KAD+ILKY   EARLLKAYGELP NTR+N
Sbjct:   18 EAVVGKRELIFKEEGQEYAQVLRMLGNGRCDAMCFDGTKRLCHIRGKMHRKVWIDAGDIILVGLRDYQDHKADIILKYWTYEARLLKAYGELPANTRIN 116

[Close]

BLAST of CV091036 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s08950.1 ()

HSP 1 Score: 108.612 bits (270), Expect = 4.236e-24
Identity = 60/99 (60.61%), Postives = 64/99 (64.65%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            +ADDEKREL+FKED QEYAQ                          K  KKVWIAAGDIILVGL DYQDDK DVILK+MPDEA LLKAYGELP   +LN
Sbjct:   18 DADDEKRELIFKEDEQEYAQ--------------------------KDDKKVWIAAGDIILVGLSDYQDDKVDVILKHMPDEAMLLKAYGELPVKIKLN 90

[Close]

BLAST of CV091036 vs. P. persica 1.0 peptide
Match: ppa002870m ()

HSP 1 Score: 95.5153 bits (236), Expect = 2.642e-20
Identity = 43/106 (40.57%), Postives = 68/106 (64.15%), Query Frame = -1

Query:  199 KPTSNPFIKPSILWQLTICLQQPSLIRHXXXXXXXXXXXVIP*SDEDDVTGCDPHLLVHLPSDVAQPLGAVDARRLAPAVSQHTEDLGVLLAVFFEDELAFLVVGF 516
            K   N  IK  +LW+L+ICLQ+PSLIRH           +I  ++++D+TGC+P+LLVHL +DV + L  ++A      V+QHT+ LG+LL++F + +    ++GF
Sbjct:  487 KTPGNTLIKTCVLWKLSICLQKPSLIRHVLEDHISFVVLIITKTNKNDITGCNPNLLVHLTTDVTKSLRPINAHGFTATVTQHTKHLGILLSIFLKHKFTLFIIGF 592

[Close]

BLAST of CV091036 vs. TrEMBL
Match: A9PE28|A9PE28_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_645034 PE=2 SV=1)

HSP 1 Score: 205.682 bits (522), Expect = 3.387e-51
Identity = 98/99 (98.99%), Postives = 99/99 (100.00%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKREL+FKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN
Sbjct:   18 EADDEKRELIFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 116

[Close]

BLAST of CV091036 vs. TrEMBL
Match: A5BQH0|A5BQH0_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_021007 PE=3 SV=1)

HSP 1 Score: 203.756 bits (517), Expect = 1.287e-50
Identity = 98/99 (98.99%), Postives = 98/99 (98.99%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKRELVFKEDGQEYAQVLRMLGNGRCEA CIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN
Sbjct:   18 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 116

[Close]

BLAST of CV091036 vs. TrEMBL
Match: Q2XTB8|Q2XTB8_SOLTU (Putative translation initiation factor eIF-1A-like OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.681e-50
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKRELVFKEDGQEYAQVLRMLGNGRCEA CIDGTKRLCHIRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN
Sbjct:   18 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 116

[Close]

BLAST of CV091036 vs. TrEMBL
Match: A9PCD3|A9PCD3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_732377 PE=2 SV=1)

HSP 1 Score: 203.371 bits (516), Expect = 1.681e-50
Identity = 97/99 (97.98%), Postives = 98/99 (98.99%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKREL+FKEDGQEYAQVLRMLGNGRCEA CIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN
Sbjct:   18 EADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 116

[Close]

BLAST of CV091036 vs. TrEMBL
Match: B9SSH7|B9SSH7_RICCO (Eif-1a, putative OS=Ricinus communis GN=RCOM_0510890 PE=3 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.388e-50
Identity = 96/99 (96.97%), Postives = 98/99 (98.99%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKREL+FKEDGQEYAQVLRMLGNGRCEA CIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPE+TRLN
Sbjct:   18 EADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPESTRLN 116

[Close]

BLAST of CV091036 vs. TrEMBL
Match: A9NLE4|A9NLE4_PICSI (Putative uncharacterized protein OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 201.445 bits (511), Expect = 6.388e-50
Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKRELVFKEDGQEYAQVLRMLGNGRCEA CIDGTKRLCHIRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYMPDEARLLKAYGELPEN RLN
Sbjct:   18 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEALCIDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMPDEARLLKAYGELPENVRLN 116

[Close]

BLAST of CV091036 vs. TrEMBL
Match: B5M1Y2|B5M1Y2_RHEAU (Translation initiation factor OS=Rheum australe PE=2 SV=1)

HSP 1 Score: 200.29 bits (508), Expect = 1.423e-49
Identity = 96/99 (96.97%), Postives = 97/99 (97.98%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCID TKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELP+N RLN
Sbjct:   18 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDNTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPDNIRLN 116

[Close]

BLAST of CV091036 vs. TrEMBL
Match: Q9SJB9|Q9SJB9_ARATH (Putative translation initiation factor eIF-1A OS=Arabidopsis thaliana GN=At2g04520 PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.859e-49
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKREL+FKEDGQEYAQVLRMLGNGRCEA CIDGTKRLCHIRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLN
Sbjct:   18 EADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

[Close]

BLAST of CV091036 vs. TrEMBL
Match: Q93VF1|Q93VF1_ARATH (At2g04520/T1O3.7 OS=Arabidopsis thaliana PE=2 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.859e-49
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKREL+FKEDGQEYAQVLRMLGNGRCEA CIDGTKRLCHIRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLN
Sbjct:   18 EADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

[Close]

BLAST of CV091036 vs. TrEMBL
Match: D7L820|D7L820_ARALY (Putative uncharacterized protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_899257 PE=4 SV=1)

HSP 1 Score: 199.904 bits (507), Expect = 1.859e-49
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKREL+FKEDGQEYAQVLRMLGNGRCEA CIDGTKRLCHIRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLN
Sbjct:   18 EADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

[Close]

BLAST of CV091036 vs. Vitis vinifera peptide
Match: GSVIVT01008892001 (assembled CDS)

HSP 1 Score: 122.094 bits (305), Expect = 2.248e-28
Identity = 67/99 (67.68%), Postives = 68/99 (68.69%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            +ADDEKRELVFKEDGQEYAQV                               WIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN
Sbjct:    5 KADDEKRELVFKEDGQEYAQV-------------------------------WIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 72

[Close]

BLAST of CV091036 vs. TAIR peptide
Match: AT2G04520.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr2:1574802-1575239 REVERSE LENGTH=145)

HSP 1 Score: 199.904 bits (507), Expect = 1.229e-51
Identity = 95/99 (95.96%), Postives = 97/99 (97.98%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKREL+FKEDGQEYAQVLRMLGNGRCEA CIDGTKRLCHIRGKMHKKVWIAAGDI+LVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLN
Sbjct:   18 EADDEKRELIFKEDGQEYAQVLRMLGNGRCEAMCIDGTKRLCHIRGKMHKKVWIAAGDIVLVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

[Close]

BLAST of CV091036 vs. TAIR peptide
Match: AT5G35680.3 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr5:13858085-13858589 REVERSE LENGTH=150)

HSP 1 Score: 195.667 bits (496), Expect = 2.317e-50
Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKREL+FKEDGQEYAQVLRMLGNGRC+  CIDG KRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLN
Sbjct:   18 EADDEKRELIFKEDGQEYAQVLRMLGNGRCDVMCIDGVKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

[Close]

BLAST of CV091036 vs. TAIR peptide
Match: AT5G35680.2 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr5:13858152-13858589 REVERSE LENGTH=145)

HSP 1 Score: 195.667 bits (496), Expect = 2.317e-50
Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKREL+FKEDGQEYAQVLRMLGNGRC+  CIDG KRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLN
Sbjct:   18 EADDEKRELIFKEDGQEYAQVLRMLGNGRCDVMCIDGVKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

[Close]

BLAST of CV091036 vs. TAIR peptide
Match: AT5G35680.1 (| Symbols: | Nucleic acid-binding, OB-fold-like protein | chr5:13858152-13858589 REVERSE LENGTH=145)

HSP 1 Score: 195.667 bits (496), Expect = 2.317e-50
Identity = 93/99 (93.94%), Postives = 95/99 (95.96%), Query Frame = 1

Query:  199 EADDEKRELVFKEDGQEYAQVLRMLGNGRCEATCIDGTKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMPDEARLLKAYGELPENTRLN 495
            EADDEKREL+FKEDGQEYAQVLRMLGNGRC+  CIDG KRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYM DEARLLKAYGELPENTRLN
Sbjct:   18 EADDEKRELIFKEDGQEYAQVLRMLGNGRCDVMCIDGVKRLCHIRGKMHKKVWIAAGDIILVGLRDYQDDKADVILKYMSDEARLLKAYGELPENTRLN 116

The following BLAST results are available for this feature:

BLAST of CV091036 vs. DB:swissprot:display
BLAST of CV091036 vs. Populus trichocarpa peptide v2.0
BLAST of CV091036 vs. P. persica 1.0 peptide
BLAST of CV091036 vs. TrEMBL
BLAST of CV091036 vs. Vitis vinifera peptide
BLAST of CV091036 vs. TAIR peptide

BLAST of CV091036 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
IF1A_ONOVI	3.600e-50	95.96	Eukaryotic translation initiation factor 1A OS=Ono...	[more]
IF1A_WHEAT	5.748e-48	90.91	Eukaryotic translation initiation factor 1A OS=Tri...	[more]
IF1AY_PANTR	2.859e-39	77.78	Eukaryotic translation initiation factor 1A, Y-chr...	[more]
IF1AY_HUMAN	2.859e-39	77.78	Eukaryotic translation initiation factor 1A, Y-chr...	[more]
IF1AX_PONAB	2.859e-39	77.78	Eukaryotic translation initiation factor 1A, X-chr...	[more]
IF1AX_MOUSE	2.859e-39	77.78	Eukaryotic translation initiation factor 1A, X-chr...	[more]
IF1AX_HUMAN	2.859e-39	77.78	Eukaryotic translation initiation factor 1A, X-chr...	[more]
IF1A_RAT	8.320e-39	75.76	Eukaryotic translation initiation factor 1A OS=Rat...	[more]
IF1A_MOUSE	8.320e-39	75.76	Eukaryotic translation initiation factor 1A OS=Mus...	[more]
IF1A_RABIT	2.266e-36	74.75	Eukaryotic translation initiation factor 1A OS=Ory...	[more]

BLAST of CV091036 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 4


Match Name	E-value	Identity
POPTR_0002s21870.1	2.546e-53	98.99	[more]
POPTR_0014s15910.1	1.264e-52	97.98	[more]
POPTR_0002s03310.1	6.950e-43	82.83	[more]
POPTR_0014s08950.1	4.236e-24	60.61	[more]

BLAST of CV091036 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa002870m	2.642e-20	40.57		[more]

BLAST of CV091036 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
A9PE28\|A9PE28_POPTR	3.387e-51	98.99	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
A5BQH0\|A5BQH0_VITVI	1.287e-50	98.99	Putative uncharacterized protein OS=Vitis vinifera...	[more]
Q2XTB8\|Q2XTB8_SOLTU	1.681e-50	97.98	Putative translation initiation factor eIF-1A-like...	[more]
A9PCD3\|A9PCD3_POPTR	1.681e-50	97.98	Predicted protein OS=Populus trichocarpa GN=POPTRD...	[more]
B9SSH7\|B9SSH7_RICCO	6.388e-50	96.97	Eif-1a, putative OS=Ricinus communis GN=RCOM_05108...	[more]
A9NLE4\|A9NLE4_PICSI	6.388e-50	96.97	Putative uncharacterized protein OS=Picea sitchens...	[more]
B5M1Y2\|B5M1Y2_RHEAU	1.423e-49	96.97	Translation initiation factor OS=Rheum australe PE...	[more]
Q9SJB9\|Q9SJB9_ARATH	1.859e-49	95.96	Putative translation initiation factor eIF-1A OS=A...	[more]
Q93VF1\|Q93VF1_ARATH	1.859e-49	95.96	At2g04520/T1O3.7 OS=Arabidopsis thaliana PE=2 SV=1	[more]
D7L820\|D7L820_ARALY	1.859e-49	95.96	Putative uncharacterized protein OS=Arabidopsis ly...	[more]

BLAST of CV091036 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01008892001	2.248e-28	67.68	assembled CDS	[more]

BLAST of CV091036 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 4


Match Name	E-value	Identity	Description
AT2G04520.1	1.229e-51	95.96	\| Symbols: \| Nucleic acid-binding, OB-fold-like p...	[more]
AT5G35680.3	2.317e-50	93.94	\| Symbols: \| Nucleic acid-binding, OB-fold-like p...	[more]
AT5G35680.2	2.317e-50	93.94	\| Symbols: \| Nucleic acid-binding, OB-fold-like p...	[more]
AT5G35680.1	2.317e-50	93.94	\| Symbols: \| Nucleic acid-binding, OB-fold-like p...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 9..43 score
None	No IPR available	SEG	seg	seg	coord: 37..51 score: NAcoord: 151..179 score
None	No IPR available	SEG	seg	seg	coord: 6..21 score: NAcoord: 28..43 score
None	No IPR available	SEG	seg	seg	coord: 34..48 score: NAcoord: 66..88 score
None	No IPR available	SEG	seg	seg	coord: 10..33 score: NAcoord: 62..73 score
None	No IPR available	SEG	seg	seg	coord: 64..78 score
None	No IPR available	SEG	seg	seg	coord: 43..56 score
None	No IPR available	SEG	seg	seg	coord: 1..11 score: NAcoord: 31..43 score
None	No IPR available	SEG	seg	seg	coord: 52..81 score
IPR001253	Translation initiation factor 1A (eIF-1A)	HAMAP	MF_00216	aIF_1A	coord: 50..144 score: 18
IPR001253	Translation initiation factor 1A (eIF-1A)	PANTHER	PTHR21668	EIF-1A	coord: 36..179 score: 8.5
IPR001253	Translation initiation factor 1A (eIF-1A)	SMART	SM00652	no description	coord: 62..144 score: 8.9
IPR001253	Translation initiation factor 1A (eIF-1A)	TIGRFAMs	TIGR00523	eIF-1A: translation initiation factor eIF-1A	coord: 48..145 score: 2.7
IPR006196	RNA-binding domain, S1, IF1 type	PFAM	PF01176	eIF-1a	coord: 64..128 score: 3.7
IPR006196	RNA-binding domain, S1, IF1 type	PROFILE	PS50832	S1_IF1_TYPE	coord: 56..130 score: 31
IPR012340	Nucleic acid-binding, OB-fold	GENE3D	2.40.50.140	no description	coord: 36..178 score: 5.6
IPR016027	Nucleic acid-binding, OB-fold-like	SUPERFAMILY	50249	Nucleic acid-binding proteins	coord: 36..179 score: 2.3
IPR018104	Translation initiation factor 1A (eIF-1A), conserved site	PROSITE	PS01262	IF1A	coord: 75..97 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV091036 ID=CV091036; Name=CV091036; organism=Vaccinium corymbosum; type=EST; length=747bp
CGAGGCGCATATACCAGACTAGATATTTCCAATCCAAGACCATAACCACA
AATACAGATAACCTATCTATCTATCTGCACAAATCTATCAGAACAGAAGC
GAGGCGATCATCATCAACAACCACCGTCCGATCTAGGGTTTCAAGCCATG
CCGAAGAACAAGGGAAAGGGAGGCAAGAACCGAAAGAGGGGCAAGAACGA
AGCCGACGACGAGAAACGCGAGCTCGTCTTCAAAGAAGACGGCCAGGAGT
ACGCCCAGGTCCTCCGTATGCTGGGAAACGGCAGGTGCGAGGCGACGTGC
ATCGACGGCACCAAGCGGCTGTGCCACATCAGAGGGAAGATGCACAAGAA
GGTGTGGATCGCAGCCGGTGACATCATCCTCGTCGGACTAAGGGATTACC
AGGACGACAAGGCTGACGTCATCCTCAAGTACATGCCTGATGAGGCTAGG
TTGTTGAAGGCATATGGTGAGTTGCCAGAGAATACTAGGCTTAATGAAGG
GATTGCTGGTGGGCTTGATGAGGAGGAGGAGGGTGCTGGTGATGATTATA
TTGAGTTCGAGGATGAGGATATCGATAAAATCTAGGGTTTTGGAAACAAT
GCCAGAAACACCACCTTATAATTCTGGACGCAACGGTCTCCGGAGCCGTA
TGATGCATATGGGCCCACATTCATCGAACGGCTTAGTTGTGTCTGGACTT
GTGTTTTAAAGTTGTATTGCTAGACTTGTCATTTTCGATATCTCGAC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003743	translation initiation factor activity
GO:0003723	RNA binding

Vocabulary: **Biological Process**
Term	Definition
GO:0006413	translational initiation

Vocabulary: **KEGG ORTHOLOGY**
Term	Definition
K03236	eIF-1A, EIF1A; translation initiation factor eIF-1A

Vocabulary: **KEGG PATHWAY**
Term	Definition
ko03010	Ribosome

Vocabulary: **INTERPRO**
Term	Definition
IPR001253	TIF_eIF-1A
IPR006196	RNA-binding_domain_S1_IF1
IPR012340	NA-bd_OB-fold
IPR016027	Nucleic acid-binding, OB-fold-like
IPR018104	TIF_eIF-1A_CS
noIPR	unintegrated