CV091128 | GDV

EST Overview


Name	CV091128
Unique Name	CV091128
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	749

Libraries


Library Name	Type
LIBEST_014531 cDNA non acclimated Bluecrop library	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Swissprot	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL	2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide	2011-01-25
BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide	2011-02-10
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18
KEGG analysis for Vaccinium corymbosum unigene v1	2011-01-18

Homology

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BLAST of CV091128 vs. DB:swissprot:display
Match: RNH2A_ARATH (Ribonuclease H2 subunit A OS=Arabidopsis thaliana GN=At2g25100 PE=2 SV=2)

HSP 1 Score: 371.703 bits (953), Expect = 2.376e-102
Identity = 178/248 (71.77%), Postives = 214/248 (86.29%), Query Frame = 1

Query:    4 VSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            +SYQ +L+SL+FADSKTLKEEKREEL+E+LK D+S+GW VDVIDPRELSAKML KNK NLNEISH SAMGL+KRV+++GVLLTE Y+DTVGDP+KYRIKLSERFP IKFVV+KKADSL+P+VSGASIVAKVTRDRA++ W+++ET E+++RNFGS YPGDP TK+WL  HKH VFGFP+LVRFSWGTCT + K  VEV WE+D+ +E  + +  SKRQ  LS  GF   +++SEEIESSGKGRCKF Q
Sbjct:   40 ISYQSSLASLHFADSKTLKEEKREELYESLKLDKSLGWAVDVIDPRELSAKMLAKNKTNLNEISHNSAMGLIKRVLDMGVLLTEAYLDTVGDPDKYRIKLSERFPSIKFVVSKKADSLFPIVSGASIVAKVTRDRALKEWLVEETGEDINRNFGSGYPGDPETKAWLVQHKHSVFGFPSLVRFSWGTCTTHLKGEVEVAWEADENEESGNGS-SSKRQAKLSSFGFKTCEKRSEEIESSGKGRCKFLQ 286

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BLAST of CV091128 vs. DB:swissprot:display
Match: RNH2A_RAT (Ribonuclease H2 subunit A OS=Rattus norvegicus GN=Rnaseh2a PE=2 SV=1)

HSP 1 Score: 202.601 bits (514), Expect = 1.909e-51
Identity = 98/204 (48.04%), Postives = 135/204 (66.18%), Query Frame = 1

Query:   22 LSSLNFADSKTLKEEKREELFENLKTD-ESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYF-KDIVEVLWESDKTDED 627
            L +L  ADSKTL E +RE LF  ++ D + +GW +D++ P  +S  ML + K NLN +SH++A GL++  ++  V +T+V+VDTVG PE Y+ +L +RFPGI+  V  KADSL+PVVS ASI+AKV RD+AV+NW   E+ + +  ++GS YP DP TK+WL  H   VFGFP  VRFSW T      K+   V WE    +ED
Sbjct:   60 LEALKVADSKTLTENERERLFAKMEEDGDFVGWALDILSPNLISTSMLGRVKYNLNSMSHDTAAGLIQHAMDQNVKVTQVFVDTVGMPETYQARLQQRFPGIEVTVKAKADSLFPVVSAASIIAKVARDQAVKNWQFVESLQGLDSDYGSGYPNDPKTKAWLRKHVDPVFGFPQFVRFSWSTAQAILEKEAESVTWEDSAAEED 263

[Close]

BLAST of CV091128 vs. DB:swissprot:display
Match: RNH2A_MOUSE (Ribonuclease H2 subunit A OS=Mus musculus GN=Rnaseh2a PE=1 SV=2)

HSP 1 Score: 201.83 bits (512), Expect = 3.256e-51
Identity = 98/204 (48.04%), Postives = 136/204 (66.67%), Query Frame = 1

Query:   22 LSSLNFADSKTLKEEKREELFENLKTD-ESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYF-KDIVEVLWESDKTDED 627
            L +L  ADSKTL E +RE LF  ++ D + +GW +DV+ P  +S  ML + K NLN +SH++A GL++  ++  V +T+V+VDTVG PE Y+ +L + FPGI+  V  KADSL+PVVS ASI AKV RD+AV+NW   E  +++  ++GS YP DP TK+WL  H   VFGFP  VRFSW T      K+  +V+WE  + +ED
Sbjct:   60 LEALKVADSKTLTENERERLFAKMEEDGDFVGWALDVLSPNLISTSMLGRVKYNLNSLSHDTAAGLIQYALDQNVNVTQVFVDTVGMPETYQARLQQHFPGIEVTVKAKADSLFPVVSAASIFAKVARDKAVKNWQFVENLQDLDSDYGSGYPNDPKTKAWLRKHVDPVFGFPQFVRFSWSTAQAILEKEAEDVIWEDSEAEED 263

[Close]

BLAST of CV091128 vs. DB:swissprot:display
Match: RNH2A_HUMAN (Ribonuclease H2 subunit A OS=Homo sapiens GN=RNASEH2A PE=1 SV=2)

HSP 1 Score: 199.519 bits (506), Expect = 1.616e-50
Identity = 100/215 (46.51%), Postives = 141/215 (65.58%), Query Frame = 1

Query:   22 LSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTC-TPYFKDIVEVLWESDKTDEDASSTRGSKRQLT 663
            L +L  ADSKTL E +RE LF  ++  + +GW +DV+ P  +S  ML + K NLN +SH++A GL++  ++ GV +T+V+VDTVG PE Y+ +L + FPGI+  V  KAD+LYPVVS ASI AKV RD+AV+ W   E  +++  ++GS YP DP TK+WL+ H   VFGFP  VRFSW T  T   K+  +V+WE     + AS  +   R++T
Sbjct:   60 LEALKVADSKTLLESERERLFAKMEDTDFVGWALDVLSPNLISTSMLGRVKYNLNSLSHDTATGLIQYALDQGVNVTQVFVDTVGMPETYQARLQQSFPGIEVTVKAKADALYPVVSAASICAKVARDQAVKKWQFVEKLQDLDTDYGSGYPNDPKTKAWLKEHVEPVFGFPQFVRFSWRTAQTILEKEAEDVIWE-----DSASENQEGLRKIT 269

[Close]

BLAST of CV091128 vs. DB:swissprot:display
Match: RNH2A_BOVIN (Ribonuclease H2 subunit A OS=Bos taurus GN=RNASEH2A PE=1 SV=1)

HSP 1 Score: 195.667 bits (496), Expect = 2.334e-49
Identity = 99/209 (47.37%), Postives = 137/209 (65.55%), Query Frame = 1

Query:    4 VSYQKTLSSLNFADSKTLKEEKREELFENLKTD-ESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVE-VLWESDKTDE 624
            +S  + L +L  ADSKTL E +R+ LF  ++ D + +GW +DV+ P  +S  ML + K NLN +SH++A GLV+  ++ GV + +V+VDTVG PE Y+ +L +RFPGI+  V  KAD+LYPVVS ASI AKV RD+AV+NW   E  +++  ++GS YP DP TK+WL  H   VFGFP  VRFSW T     +   E V WE  +T +
Sbjct:   54 LSRLEDLEALKVADSKTLSESERDRLFAKMEEDGDFVGWALDVLSPNLISTSMLGRVKYNLNALSHDTATGLVQFALDQGVNVAQVFVDTVGLPETYQERLQQRFPGIEVTVKAKADALYPVVSAASICAKVARDQAVKNWKFVEKLQDLDTDYGSGYPNDPKTKAWLRKHVDPVFGFPQFVRFSWRTAQSILESEAEDVKWEDSETGD 262

[Close]

BLAST of CV091128 vs. DB:swissprot:display
Match: RNH2A_DROME (Ribonuclease H2 subunit A OS=Drosophila melanogaster GN=CG13690 PE=2 SV=1)

HSP 1 Score: 193.741 bits (491), Expect = 8.868e-49
Identity = 111/248 (44.76%), Postives = 147/248 (59.27%), Query Frame = 1

Query:   16 KTLSSLNFADSKTLKEEKREELFENLKTDE----SIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            K L  L  ADSK L E KR+ +F ++ T E     +GW V++I P  +S  M +++K +LNE+S +SAMGL+++ ++ GV + EVYVDTVG PEKY+ KL +RFP  K  VAKKADS YP+VS ASI AKVTRD A++ W   E        FGS YPGDP T+ +L  +   VFGFP LVRFSW T      D    + E D+ D +     G+K  LT     F G  +  E I    +  C+FF+
Sbjct:  100 KALEDLGCADSKQLTEGKRDIIFNDINTKEYATSCVGWAVEIISPNTISTSMYRRSKCSLNEVSMDSAMGLIQQAIDAGVNIAEVYVDTVGPPEKYQEKLLKRFPSFKITVAKKADSTYPIVSAASICAKVTRDHALKVWSFPEGLVIKDNEFGSGYPGDPVTRRFLTEYIDLVFGFPRLVRFSWSTAENALADKAYDM-EFDEPDSEKPKYAGTK--LTKF---FKGTTKSGEII----REECRFFK 337

[Close]

BLAST of CV091128 vs. DB:swissprot:display
Match: RNH2A_DICDI (Ribonuclease H2 subunit A OS=Dictyostelium discoideum GN=rnaseh2A PE=3 SV=1)

HSP 1 Score: 177.178 bits (448), Expect = 8.589e-44
Identity = 97/228 (42.54%), Postives = 143/228 (62.72%), Query Frame = 1

Query:    4 VSYQKTLSSLNFADSKTLKEEKREELFENL-KTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGI-KFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLD-----ETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDI---VEVLWESDKTDEDASSTRGSKRQ 657
            +S   TL S+ F DSK L E++R++LF+ + ++++ + +E DVI    LS KML K  I+LN ISHESA+GL++ V+  GV + E+Y+DTVG P+KY++ L + FP I K +V+KKADSLYP+VS ASI AKV RD  + N   D     +  E +  +FGS YP DP +K WL  ++  VFG+P  +RFSW T     +     V+ + E+DK  +     +  K++
Sbjct:   46 ISKSTTLKSMKFNDSKKLTEQQRDQLFDKMGESNKILAYETDVITAEILSEKMLYKKPISLNVISHESAIGLIRSVLKKGVNVQELYLDTVGPPDKYQLMLKKLFPEIGKIIVSKKADSLYPIVSAASIAAKVVRDFEITNKNFDYLNIYDQDEQLSTDFGSGYPSDPLSKKWLVKNRDKVFGYPNFIRFSWKTTETAMRGACFGVDWVLENDKLKQHFQENQNDKKR 273

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BLAST of CV091128 vs. DB:swissprot:display
Match: RNH2A_CAEEL (Ribonuclease H2 subunit A OS=Caenorhabditis elegans GN=rnh-2 PE=2 SV=1)

HSP 1 Score: 163.31 bits (412), Expect = 1.284e-39
Identity = 92/213 (43.19%), Postives = 125/213 (58.69%), Query Frame = 1

Query:   22 LSSLNFADSKTLKEEKREELFENLKTDESI----GWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVL-DETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTC-TPYFKDIVEVLWESDKTDEDASSTR 642
            L +L   DSK L E KREE+F  +  DE I     + +  + P  +S  MLK+ K +LNE+SHE+A+ L++  +   V + E+ VDTVG    Y+ KL + FPGI   V +KADSL+P+VS ASI AKVTRD  +RNW   ++  +     +GS YPGDP TK +L+     VFGF +LVR SW T  T   K  V   WE D+ +  + S R
Sbjct:   53 LKNLGVDDSKALNEAKREEIFNKMNEDEDIQQIIAYALRCLSPELISCSMLKRQKYSLNEVSHEAAITLIRDALACNVNVVEIKVDTVGPKATYQAKLEKLFPGISICVTEKADSLFPIVSAASIAAKVTRDSRLRNWQFREKNIKVPDAGYGSGYPGDPNTKKFLQLSVEPVFGFCSLVRSSWKTASTIVEKRCVPGSWEDDEEEGKSQSKR 265

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BLAST of CV091128 vs. DB:swissprot:display
Match: RNH2A_YEAST (Ribonuclease H2 subunit A OS=Saccharomyces cerevisiae GN=RNH201 PE=1 SV=1)

HSP 1 Score: 144.436 bits (363), Expect = 6.170e-34
Identity = 88/223 (39.46%), Postives = 121/223 (54.26%), Query Frame = 1

Query:   22 LSSLNFADSKTLKEEKREELFENLKTDES----IGWEVDVIDPRELSAKMLK---KNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFP-TLVRFSWGTCTPYF----KDIVEVLWESDKTDEDASSTRGSKR 654
            + +  F DSK L +  R  LF  +  D      IG+    I P ++S  M K       NLNE +H+  M L+  V+   V L+ VYVDTVG P  Y+ KL +RFPG+KF VAKKADSLY +VS AS+VAKVTRD  V +   D          GS YP DP T +WL+ ++  + G+P  +VRFSW TC        K+ + + WE    D   ++ + +K+
Sbjct:   67 IPNYEFDDSKKLTDPIRRMLFSKIYQDNEELTQIGYATTCITPLDISRGMSKFPPTRNYNLNEQAHDVTMALIDGVIKQNVKLSHVYVDTVGPPASYQKKLEQRFPGVKFTVAKKADSLYCMVSVASVVAKVTRDILVESLKRDP-----DEILGSGYPSDPKTVAWLKRNQTSLMGWPANMVRFSWQTCQTLLDDASKNSIPIKWEEQYMDSRKNAAQKTKQ 284

[Close]

BLAST of CV091128 vs. DB:swissprot:display
Match: RNH2A_SCHPO (Ribonuclease H2 subunit A OS=Schizosaccharomyces pombe GN=rnh201 PE=2 SV=1)

HSP 1 Score: 141.354 bits (355), Expect = 5.223e-33
Identity = 90/209 (43.06%), Postives = 128/209 (61.24%), Query Frame = 1

Query:   22 LSSLNFADSKTLKEEKREELFENL--KTDE---SIGWEVDVIDPRELSAKMLK-KNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMH-RNFGSXYPGDPGTKSWLEHHKHHVFGFP-TLVRFSWGTCTPYFKDIVEVLWESDKTDE 624
            L++  FADSKTL   KREEL + +  K++E   ++GW    I  REL+A ML+ +NK NLN  +H++ + L+K+V   G+ +TE+YVDTVG P  Y+ KL   FP  K  V KKADSL+P+VS ASI AKVTRD       L+   E++   N+GS Y  D  T  WL+ +   +FG+   +VR+SW T     KD++E+  +S  + E
Sbjct:   93 LTNYGFADSKTLASLKREELLKLICNKSNELGKNVGWSTMSISARELAAGMLRYRNKYNLNLQAHDTTIDLIKKVYESGINVTEIYVDTVGPPISYQEKLQAHFPQAKVTVTKKADSLFPIVSLASICAKVTRDIQ-----LECARESIRTENWGSGYSSDARTTEWLKVNVDKIFGWKGDIVRYSWKTA----KDLLELPSKSQSSIE 292

[Close]

BLAST of CV091128 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s02070.1 ()

HSP 1 Score: 407.912 bits (1047), Expect = 3.378e-114
Identity = 204/249 (81.93%), Postives = 220/249 (88.35%), Query Frame = 1

Query:    1 AVSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            A SY+KTLS+L FADSKTLKEEKREELFE LK +E IGW VDVIDPRELSAKMLKK KINLNEISH+SA GLV RV+N+GVLLT+VYVDTVGDPEKYRIKLSERFP IKFVVAKKADSLYPVVSGASIVAKVTRDRA+R+WVLDETAENM RNFGS YPGDP TKSWLE H+H VFGFP+LVRFSWGTCT Y K++VEV+WESDKT+ED SS+   KRQL LS  G    KRKSEEIESSGK RCKFFQ
Sbjct:   39 ARSYEKTLSTLKFADSKTLKEEKREELFEKLKANELIGWAVDVIDPRELSAKMLKKIKINLNEISHDSASGLVTRVLNMGVLLTDVYVDTVGDPEKYRIKLSERFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALRDWVLDETAENMTRNFGSGYPGDPETKSWLEKHQHSVFGFPSLVRFSWGTCTSYSKNMVEVVWESDKTEEDGSSSSSGKRQLKLSSFGVTTSKRKSEEIESSGKSRCKFFQ 287

[Close]

BLAST of CV091128 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s24600.1 ()

HSP 1 Score: 257.684 bits (657), Expect = 5.646e-69
Identity = 151/270 (55.93%), Postives = 170/270 (62.96%), Query Frame = 1

Query:   61 EEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPG-----TKSWL-----------------------EHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVL--------------WESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFF 744
            + K    FENLK +ESIGW VDV DPRELSAKMLKKNKINLNEISH+SA GLV RV+N+GVLLTEV VDTVGDPEKYRIKLSE FP +KFVVAKKA SLYPVVSGASIVAKV         V+    ++++       P + G      K+WL                         H+H VFGFPTLVRFSWGTCTPY K++V++L               ESDK  ED SS+   KRQL  S  G    KRKSEE ESSGK RCKFF
Sbjct:   34 QRKGRSDFENLKANESIGWAVDVNDPRELSAKMLKKNKINLNEISHDSASGLVNRVLNMGVLLTEVCVDTVGDPEKYRIKLSESFPFVKFVVAKKAGSLYPVVSGASIVAKV---------VISHPFDSLNFRLQEIGPCEDGYLMKQLKTWLGILDLDTLEFYCCVQILKLKLGWNKHEHSVFGFPTLVRFSWGTCTPYSKNMVDLLNVSCLATFFFLFLSRESDKLVEDGSSSSSRKRQLKSSSFGVTTSKRKSEETESSGKSRCKFF 294

[Close]

BLAST of CV091128 vs. P. persica 1.0 peptide
Match: ppa009327m ()

HSP 1 Score: 417.927 bits (1073), Expect = 2.324e-117
Identity = 203/248 (81.85%), Postives = 224/248 (90.32%), Query Frame = 1

Query:    1 AVSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFF 744
            A SY+KTLSSLNFADSKTLKEEKREELFENLK DESIGW VD+IDPRELSAKMLKKNKINLNEISH+SA+GL+ +V+N+GVLLTEVYVDTVGD EKYR KLSERFP +KFVVAKKADSLYPVVSGASIVAKVTRDRA+R+WVL+ETAE++H++FGS YPGDP TK+WL+HHKH VFGFPTLVRFSWGTCTPYFKDIVEV WES++TD D SS+   KRQL LS  G    KRK EEIESSGKGRCKFF
Sbjct:   39 ARSYEKTLSSLNFADSKTLKEEKREELFENLKADESIGWAVDIIDPRELSAKMLKKNKINLNEISHDSAIGLITKVLNMGVLLTEVYVDTVGDAEKYRTKLSERFPAVKFVVAKKADSLYPVVSGASIVAKVTRDRALRDWVLEETAEDLHKDFGSGYPGDPNTKAWLQHHKHLVFGFPTLVRFSWGTCTPYFKDIVEVSWESNETDGDGSSSANGKRQLKLSNFGVTKSKRKIEEIESSGKGRCKFF 286

[Close]

BLAST of CV091128 vs. TrEMBL
Match: D7TNZ6|D7TNZ6_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_101.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00010722001 PE=4 SV=1)

HSP 1 Score: 426.402 bits (1095), Expect = 1.221e-117
Identity = 211/249 (84.74%), Postives = 224/249 (89.96%), Query Frame = 1

Query:    1 AVSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            A SY  TLS+LNFADSKTLKEEKREELFENLK DESIGW VDVIDP ELSAKMLKKNKINLNEISH+SA+GL+ RV+N+GVLLTEVYVDTVGD EKYRIKLSERFP +KFVVAKKADSLYPVVSGASIVAKVTRDRA+R+WVL ETAENMHRNFGS YPGDP TKSWL+HHKH VFGFPTLVRFSWGTCT Y KDIVEVLWE+DK +ED S+ R  KRQL LS VGF   KRKSEEIESSGKGRCKFFQ
Sbjct:   39 ARSYHNTLSTLNFADSKTLKEEKREELFENLKADESIGWAVDVIDPWELSAKMLKKNKINLNEISHDSAIGLITRVLNMGVLLTEVYVDTVGDAEKYRIKLSERFPAVKFVVAKKADSLYPVVSGASIVAKVTRDRALRDWVLVETAENMHRNFGSGYPGDPVTKSWLQHHKHSVFGFPTLVRFSWGTCTAYSKDIVEVLWEADKVEEDGSTNRNGKRQLKLSSVGFIESKRKSEEIESSGKGRCKFFQ 287

[Close]

BLAST of CV091128 vs. TrEMBL
Match: B9HKP4|B9HKP4_POPTR (Ribonuclease OS=Populus trichocarpa GN=POPTRDRAFT_765150 PE=3 SV=1)

HSP 1 Score: 407.912 bits (1047), Expect = 4.494e-112
Identity = 204/249 (81.93%), Postives = 220/249 (88.35%), Query Frame = 1

Query:    1 AVSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            A SY+KTLS+L FADSKTLKEEKREELFE LK +E IGW VDVIDPRELSAKMLKK KINLNEISH+SA GLV RV+N+GVLLT+VYVDTVGDPEKYRIKLSERFP IKFVVAKKADSLYPVVSGASIVAKVTRDRA+R+WVLDETAENM RNFGS YPGDP TKSWLE H+H VFGFP+LVRFSWGTCT Y K++VEV+WESDKT+ED SS+   KRQL LS  G    KRKSEEIESSGK RCKFFQ
Sbjct:   39 ARSYEKTLSTLKFADSKTLKEEKREELFEKLKANELIGWAVDVIDPRELSAKMLKKIKINLNEISHDSASGLVTRVLNMGVLLTDVYVDTVGDPEKYRIKLSERFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALRDWVLDETAENMTRNFGSGYPGDPETKSWLEKHQHSVFGFPSLVRFSWGTCTSYSKNMVEVVWESDKTEEDGSSSSSGKRQLKLSSFGVTTSKRKSEEIESSGKSRCKFFQ 287

[Close]

BLAST of CV091128 vs. TrEMBL
Match: B9RPT7|B9RPT7_RICCO (Ribonuclease OS=Ricinus communis GN=RCOM_1539780 PE=3 SV=1)

HSP 1 Score: 403.29 bits (1035), Expect = 1.107e-110
Identity = 200/249 (80.32%), Postives = 218/249 (87.55%), Query Frame = 1

Query:    1 AVSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            A SY++TLS+L+FADSKTLKE+KREELFENLK +ESIGW VDVIDPRELSAKML+KNKINLNEISHESA+GL+ RV+N GVLLT+VY+DTVGD EKYRIKLSERFP IKFVVAKKADSLYPVVSGASIVAKVTRDRA+RNWVL+ETAE + RNFGS YPGDP TK+WL+ HKH VFGFPTLVRFSWGTC  Y+KD VEVLWESDK DED S     KRQL LS  G    K KSEEIESSGKGRCKFFQ
Sbjct:   41 ARSYERTLSTLSFADSKTLKEDKREELFENLKANESIGWAVDVIDPRELSAKMLQKNKINLNEISHESAIGLITRVLNEGVLLTQVYLDTVGDAEKYRIKLSERFPSIKFVVAKKADSLYPVVSGASIVAKVTRDRALRNWVLEETAEGISRNFGSGYPGDPETKAWLKQHKHQVFGFPTLVRFSWGTCNSYYKDAVEVLWESDKMDEDDSVNSNGKRQLKLSSFGITIPKTKSEEIESSGKGRCKFFQ 289

[Close]

BLAST of CV091128 vs. TrEMBL
Match: C5YS45|C5YS45_SORBI (Ribonuclease OS=Sorghum bicolor GN=Sb08g003480 PE=3 SV=1)

HSP 1 Score: 397.127 bits (1019), Expect = 7.932e-109
Identity = 190/249 (76.31%), Postives = 217/249 (87.15%), Query Frame = 1

Query:    1 AVSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            A SY  TLS+L FADSKTLKEE+REELFE+LK + SIGWEVDVI P++LSAKMLKK+K+NLNEISH SAMGLV++V+++G+LL EVY+DTVGDPEKYRIKL+E+FPGIKFVVAKKADSLYPVVSGASIVAKVTRDRA+RNWV DETA ++H   GS YPGDP TK WLE HKH VFGFPTLVRFSWGTC P+FKD VEV WESD+ DED +    +KRQ+ LS +GF G KRK+EEIESSGKGRCKFFQ
Sbjct:   38 ARSYNNTLSTLKFADSKTLKEEQREELFESLKVNSSIGWEVDVICPKDLSAKMLKKSKVNLNEISHNSAMGLVRKVLDMGILLAEVYIDTVGDPEKYRIKLTEKFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRALRNWVFDETALSLHMKTGSGYPGDPDTKQWLEDHKHPVFGFPTLVRFSWGTCKPFFKDAVEVTWESDEVDEDGTDNGSTKRQVKLSSLGFTGFKRKTEEIESSGKGRCKFFQ 286

[Close]

BLAST of CV091128 vs. TrEMBL
Match: Q53QG3|Q53QG3_ORYSJ (Ribonuclease OS=Oryza sativa subsp. japonica GN=Os11g0153900 PE=3 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 1.767e-108
Identity = 189/249 (75.90%), Postives = 218/249 (87.55%), Query Frame = 1

Query:    1 AVSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            A SYQ TL++L FADSKTLKEE+REELFE+LK + SIGWEVDVI P+ELSAKMLK++K+NLNEISH SAMGLVKR +++GVLL EVY+DTVGD EKYRIKL+E+FPGIKFVVAKKADSL+PVVSGASIV+KVTRDRA+RNWV DETA+NMH N GS YPGDP TK WLE HKH +FGFP+LVRFSWGTCTP+F D +EV WES++ +EDA S    KRQ+ LS +GF G KRKSEEI+SSGKGRCKFFQ
Sbjct:   39 ARSYQDTLATLKFADSKTLKEEQREELFESLKDNSSIGWEVDVICPKELSAKMLKRSKVNLNEISHNSAMGLVKRALDMGVLLAEVYIDTVGDAEKYRIKLTEKFPGIKFVVAKKADSLFPVVSGASIVSKVTRDRALRNWVFDETAQNMHMNTGSGYPGDPSTKQWLEDHKHPIFGFPSLVRFSWGTCTPFFNDAIEVTWESNELEEDAGSNGSVKRQVKLSSLGFTGFKRKSEEIDSSGKGRCKFFQ 287

[Close]

BLAST of CV091128 vs. TrEMBL
Match: A2ZBK3|A2ZBK3_ORYSI (Ribonuclease OS=Oryza sativa subsp. indica GN=OsI_35154 PE=3 SV=1)

HSP 1 Score: 395.971 bits (1016), Expect = 1.767e-108
Identity = 189/249 (75.90%), Postives = 218/249 (87.55%), Query Frame = 1

Query:    1 AVSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            A SYQ TL++L FADSKTLKEE+REELFE+LK + SIGWEVDVI P+ELSAKMLK++K+NLNEISH SAMGLVKR +++GVLL EVY+DTVGD EKYRIKL+E+FPGIKFVVAKKADSL+PVVSGASIV+KVTRDRA+RNWV DETA+NMH N GS YPGDP TK WLE HKH +FGFP+LVRFSWGTCTP+F D +EV WES++ +EDA S    KRQ+ LS +GF G KRKSEEI+SSGKGRCKFFQ
Sbjct:   39 ARSYQDTLATLKFADSKTLKEEQREELFESLKDNSSIGWEVDVICPKELSAKMLKRSKVNLNEISHNSAMGLVKRALDMGVLLAEVYIDTVGDAEKYRIKLTEKFPGIKFVVAKKADSLFPVVSGASIVSKVTRDRALRNWVFDETAQNMHMNTGSGYPGDPSTKQWLEDHKHPIFGFPSLVRFSWGTCTPFFNDAIEVTWESNELEEDAGSNGSVKRQVKLSSLGFTGFKRKSEEIDSSGKGRCKFFQ 287

[Close]

BLAST of CV091128 vs. TrEMBL
Match: C5Z8P5|C5Z8P5_SORBI (Ribonuclease OS=Sorghum bicolor GN=Sb10g028180 PE=3 SV=1)

HSP 1 Score: 395.201 bits (1014), Expect = 3.014e-108
Identity = 189/249 (75.90%), Postives = 217/249 (87.15%), Query Frame = 1

Query:    1 AVSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            A SY  TL++L FADSKTLKEE+REELFE+LK + SIGWEVDVI P++LSAKML+K+K+NLNEISH SAMGLV++++++GVLL EVY+DTVGDPEKYRIKL+E+FPGIKFVVAKKADSLYPVVSGASIVAKVTRDRA+RNWV DETA NMH   GS YPGD  TK WL+ HKH VFGFPTLVRFSWGTCTP+FKD VEV WESD+ DED +    +KRQ+ LS +GF G KRK+EEIESSGKGRCKFFQ
Sbjct:   38 ARSYNNTLATLKFADSKTLKEEQREELFESLKVNSSIGWEVDVICPKDLSAKMLRKSKVNLNEISHNSAMGLVRKLLDMGVLLAEVYIDTVGDPEKYRIKLTEKFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRALRNWVFDETALNMHMKTGSGYPGDTDTKQWLQDHKHPVFGFPTLVRFSWGTCTPFFKDAVEVTWESDEVDEDGTGNGSTKRQVKLSSLGFTGFKRKTEEIESSGKGRCKFFQ 286

[Close]

BLAST of CV091128 vs. TrEMBL
Match: D7LK45|D7LK45_ARALY (Predicted protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_667858 PE=4 SV=1)

HSP 1 Score: 379.407 bits (973), Expect = 1.712e-103
Identity = 183/248 (73.79%), Postives = 215/248 (86.69%), Query Frame = 1

Query:    4 VSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            +SYQ +L+SL+FADSKTLKEEKREEL+ENLK D+S+GW VDVIDPRELSAKML KNK NLNEISH SAMGL+KRV+++GVLLTE Y+DTVGDPEKYRIKLSERFP IKFVV+KKADSL+P+VSGASIVAKVTRDRA+R W+++ET E+++RNFGS YPGDP TK+WL  HKH VFGFP+LVRFSWGTCT + K  VEV WE+D+T+E  + +  SKRQ  LS  GF    ++SEEIESSGKGRCKFFQ
Sbjct:   40 ISYQSSLASLHFADSKTLKEEKREELYENLKLDKSLGWAVDVIDPRELSAKMLAKNKTNLNEISHNSAMGLIKRVLDMGVLLTEAYLDTVGDPEKYRIKLSERFPSIKFVVSKKADSLFPIVSGASIVAKVTRDRALREWLVEETGEDINRNFGSGYPGDPETKAWLVQHKHSVFGFPSLVRFSWGTCTTHLKGEVEVAWEADETEESGNGS-SSKRQAKLSSFGFKTCDKRSEEIESSGKGRCKFFQ 286

[Close]

BLAST of CV091128 vs. TrEMBL
Match: D5AEE7|D5AEE7_PICSI (Ribonuclease OS=Picea sitchensis PE=2 SV=1)

HSP 1 Score: 350.903 bits (899), Expect = 6.519e-95
Identity = 175/248 (70.56%), Postives = 208/248 (83.87%), Query Frame = 1

Query:    1 AVSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFF 744
            + SYQ+TL++L FADSKTLKEEKREELFE+LK D S+GW VD+IDPRELSAKML++ K+NLN ISH++AMGLV  V++ G+LL+EVYVDTVGD +KYRIKL E+FPGIKFVV+KKADSLYP+VSGASIVAKVTRD A+R WVLDETAE + RNFGS YPGDP TK+WLE +KH VFGFPTLVRFSW TC  Y    V V+WE D+ D+ AS+   +K+QLTL+   F  +KRKSEE+ESSGKGR KFF
Sbjct:   38 SASYQETLATLKFADSKTLKEEKREELFESLKADASLGWAVDIIDPRELSAKMLQRIKVNLNTISHDAAMGLVNTVLSKGILLSEVYVDTVGDADKYRIKLEEKFPGIKFVVSKKADSLYPIVSGASIVAKVTRDNALRGWVLDETAEGISRNFGSGYPGDPETKAWLEENKHPVFGFPTLVRFSWATCNSYTAKGVTVIWEPDEEDK-ASNGGDNKKQLTLN---FPTVKRKSEELESSGKGRFKFF 281

[Close]

BLAST of CV091128 vs. TrEMBL
Match: A8MRI6|A8MRI6_ARATH (Ribonuclease OS=Arabidopsis thaliana GN=At2g25100 PE=3 SV=1)

HSP 1 Score: 328.176 bits (840), Expect = 4.525e-88
Identity = 162/248 (65.32%), Postives = 197/248 (79.44%), Query Frame = 1

Query:    4 VSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            +SYQ +L+SL+FADSKTLKEEKREEL+E+LK D+S+GW VDVIDPRELSAKML K                   V+++GVLLTE Y+DTVGDP+KYRIKLSERFP IKFVV+KKADSL+P+VSGASIVAKVTRDRA++ W+++ET E+++RNFGS YPGDP TK+WL  HKH VFGFP+LVRFSWGTCT + K  VEV WE+D+ +E  + +  SKRQ  LS  GF   +++SEEIESSGKGRCKF Q
Sbjct:   40 ISYQSSLASLHFADSKTLKEEKREELYESLKLDKSLGWAVDVIDPRELSAKMLAK-------------------VLDMGVLLTEAYLDTVGDPDKYRIKLSERFPSIKFVVSKKADSLFPIVSGASIVAKVTRDRALKEWLVEETGEDINRNFGSGYPGDPETKAWLVQHKHSVFGFPSLVRFSWGTCTTHLKGEVEVAWEADENEESGNGS-SSKRQAKLSSFGFKTCEKRSEEIESSGKGRCKFLQ 267

[Close]

BLAST of CV091128 vs. Vitis vinifera peptide
Match: GSVIVT01010722001 (assembled CDS)

HSP 1 Score: 426.402 bits (1095), Expect = 5.573e-120
Identity = 211/249 (84.74%), Postives = 224/249 (89.96%), Query Frame = 1

Query:    1 AVSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            A SY  TLS+LNFADSKTLKEEKREELFENLK DESIGW VDVIDP ELSAKMLKKNKINLNEISH+SA+GL+ RV+N+GVLLTEVYVDTVGD EKYRIKLSERFP +KFVVAKKADSLYPVVSGASIVAKVTRDRA+R+WVL ETAENMHRNFGS YPGDP TKSWL+HHKH VFGFPTLVRFSWGTCT Y KDIVEVLWE+DK +ED S+ R  KRQL LS VGF   KRKSEEIESSGKGRCKFFQ
Sbjct:   39 ARSYHNTLSTLNFADSKTLKEEKREELFENLKADESIGWAVDVIDPWELSAKMLKKNKINLNEISHDSAIGLITRVLNMGVLLTEVYVDTVGDAEKYRIKLSERFPAVKFVVAKKADSLYPVVSGASIVAKVTRDRALRDWVLVETAENMHRNFGSGYPGDPVTKSWLQHHKHSVFGFPTLVRFSWGTCTAYSKDIVEVLWEADKVEEDGSTNRNGKRQLKLSSVGFIESKRKSEEIESSGKGRCKFFQ 287

[Close]

BLAST of CV091128 vs. TAIR peptide
Match: AT2G25100.1 (| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr2:10679767-10681654 REVERSE LENGTH=296)

HSP 1 Score: 371.703 bits (953), Expect = 2.360e-103
Identity = 178/248 (71.77%), Postives = 214/248 (86.29%), Query Frame = 1

Query:    4 VSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            +SYQ +L+SL+FADSKTLKEEKREEL+E+LK D+S+GW VDVIDPRELSAKML KNK NLNEISH SAMGL+KRV+++GVLLTE Y+DTVGDP+KYRIKLSERFP IKFVV+KKADSL+P+VSGASIVAKVTRDRA++ W+++ET E+++RNFGS YPGDP TK+WL  HKH VFGFP+LVRFSWGTCT + K  VEV WE+D+ +E  + +  SKRQ  LS  GF   +++SEEIESSGKGRCKF Q
Sbjct:   40 ISYQSSLASLHFADSKTLKEEKREELYESLKLDKSLGWAVDVIDPRELSAKMLAKNKTNLNEISHNSAMGLIKRVLDMGVLLTEAYLDTVGDPDKYRIKLSERFPSIKFVVSKKADSLFPIVSGASIVAKVTRDRALKEWLVEETGEDINRNFGSGYPGDPETKAWLVQHKHSVFGFPSLVRFSWGTCTTHLKGEVEVAWEADENEESGNGS-SSKRQAKLSSFGFKTCEKRSEEIESSGKGRCKFLQ 286

[Close]

BLAST of CV091128 vs. TAIR peptide
Match: AT2G25100.2 (| Symbols: | Polynucleotidyl transferase, ribonuclease H-like superfamily protein | chr2:10679767-10681654 REVERSE LENGTH=277)

HSP 1 Score: 328.176 bits (840), Expect = 2.992e-90
Identity = 162/248 (65.32%), Postives = 197/248 (79.44%), Query Frame = 1

Query:    4 VSYQKTLSSLNFADSKTLKEEKREELFENLKTDESIGWEVDVIDPRELSAKMLKKNKINLNEISHESAMGLVKRVVNLGVLLTEVYVDTVGDPEKYRIKLSERFPGIKFVVAKKADSLYPVVSGASIVAKVTRDRAVRNWVLDETAENMHRNFGSXYPGDPGTKSWLEHHKHHVFGFPTLVRFSWGTCTPYFKDIVEVLWESDKTDEDASSTRGSKRQLTLSGVGFAGLKRKSEEIESSGKGRCKFFQ 747
            +SYQ +L+SL+FADSKTLKEEKREEL+E+LK D+S+GW VDVIDPRELSAKML K                   V+++GVLLTE Y+DTVGDP+KYRIKLSERFP IKFVV+KKADSL+P+VSGASIVAKVTRDRA++ W+++ET E+++RNFGS YPGDP TK+WL  HKH VFGFP+LVRFSWGTCT + K  VEV WE+D+ +E  + +  SKRQ  LS  GF   +++SEEIESSGKGRCKF Q
Sbjct:   40 ISYQSSLASLHFADSKTLKEEKREELYESLKLDKSLGWAVDVIDPRELSAKMLAK-------------------VLDMGVLLTEAYLDTVGDPDKYRIKLSERFPSIKFVVSKKADSLFPIVSGASIVAKVTRDRALKEWLVEETGEDINRNFGSGYPGDPETKAWLVQHKHSVFGFPSLVRFSWGTCTTHLKGEVEVAWEADENEESGNGS-SSKRQAKLSSFGFKTCEKRSEEIESSGKGRCKFLQ 267

The following BLAST results are available for this feature:

BLAST of CV091128 vs. DB:swissprot:display
BLAST of CV091128 vs. Populus trichocarpa peptide v2.0
BLAST of CV091128 vs. P. persica 1.0 peptide
BLAST of CV091128 vs. TrEMBL
BLAST of CV091128 vs. Vitis vinifera peptide
BLAST of CV091128 vs. TAIR peptide

BLAST of CV091128 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 10


Match Name	E-value	Identity	Description
RNH2A_ARATH	2.376e-102	71.77	Ribonuclease H2 subunit A OS=Arabidopsis thaliana ...	[more]
RNH2A_RAT	1.909e-51	48.04	Ribonuclease H2 subunit A OS=Rattus norvegicus GN=...	[more]
RNH2A_MOUSE	3.256e-51	48.04	Ribonuclease H2 subunit A OS=Mus musculus GN=Rnase...	[more]
RNH2A_HUMAN	1.616e-50	46.51	Ribonuclease H2 subunit A OS=Homo sapiens GN=RNASE...	[more]
RNH2A_BOVIN	2.334e-49	47.37	Ribonuclease H2 subunit A OS=Bos taurus GN=RNASEH2...	[more]
RNH2A_DROME	8.868e-49	44.76	Ribonuclease H2 subunit A OS=Drosophila melanogast...	[more]
RNH2A_DICDI	8.589e-44	42.54	Ribonuclease H2 subunit A OS=Dictyostelium discoid...	[more]
RNH2A_CAEEL	1.284e-39	43.19	Ribonuclease H2 subunit A OS=Caenorhabditis elegan...	[more]
RNH2A_YEAST	6.170e-34	39.46	Ribonuclease H2 subunit A OS=Saccharomyces cerevis...	[more]
RNH2A_SCHPO	5.223e-33	43.06	Ribonuclease H2 subunit A OS=Schizosaccharomyces p...	[more]

BLAST of CV091128 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
POPTR_0008s02070.1	3.378e-114	81.93		[more]
POPTR_0010s24600.1	5.646e-69	55.93		[more]

BLAST of CV091128 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1


Match Name	E-value	Identity	Description
ppa009327m	2.324e-117	81.85		[more]

BLAST of CV091128 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10


Match Name	E-value	Identity	Description
D7TNZ6\|D7TNZ6_VITVI	1.221e-117	84.74	Whole genome shotgun sequence of line PN40024, sca...	[more]
B9HKP4\|B9HKP4_POPTR	4.494e-112	81.93	Ribonuclease OS=Populus trichocarpa GN=POPTRDRAFT_...	[more]
B9RPT7\|B9RPT7_RICCO	1.107e-110	80.32	Ribonuclease OS=Ricinus communis GN=RCOM_1539780 P...	[more]
C5YS45\|C5YS45_SORBI	7.932e-109	76.31	Ribonuclease OS=Sorghum bicolor GN=Sb08g003480 PE=...	[more]
Q53QG3\|Q53QG3_ORYSJ	1.767e-108	75.90	Ribonuclease OS=Oryza sativa subsp. japonica GN=Os...	[more]
A2ZBK3\|A2ZBK3_ORYSI	1.767e-108	75.90	Ribonuclease OS=Oryza sativa subsp. indica GN=OsI_...	[more]
C5Z8P5\|C5Z8P5_SORBI	3.014e-108	75.90	Ribonuclease OS=Sorghum bicolor GN=Sb10g028180 PE=...	[more]
D7LK45\|D7LK45_ARALY	1.712e-103	73.79	Predicted protein OS=Arabidopsis lyrata subsp. lyr...	[more]
D5AEE7\|D5AEE7_PICSI	6.519e-95	70.56	Ribonuclease OS=Picea sitchensis PE=2 SV=1	[more]
A8MRI6\|A8MRI6_ARATH	4.525e-88	65.32	Ribonuclease OS=Arabidopsis thaliana GN=At2g25100 ...	[more]

BLAST of CV091128 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1


Match Name	E-value	Identity	Description
GSVIVT01010722001	5.573e-120	84.74	assembled CDS	[more]

BLAST of CV091128 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 2


Match Name	E-value	Identity	Description
AT2G25100.1	2.360e-103	71.77	\| Symbols: \| Polynucleotidyl transferase, ribonuc...	[more]
AT2G25100.2	2.992e-90	65.32	\| Symbols: \| Polynucleotidyl transferase, ribonuc...	[more]

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 48..61 score
None	No IPR available	SEG	seg	seg	coord: 34..57 score
None	No IPR available	GENE3D	3.30.420.10	no description	coord: 5..141 score: 1.7
None	No IPR available	SEG	seg	seg	coord: 52..70 score
IPR001352	Ribonuclease HII/HIII	PANTHER	PTHR10954	RIBONUCLEASE HII	coord: 2..241 score: 4
IPR001352	Ribonuclease HII/HIII	PFAM	PF01351	RNase_HII	coord: 4..189 score: 2.5
IPR004649	Ribonuclease H2, subunit A	TIGRFAMs	TIGR00729	TIGR00729: ribonuclease HII	coord: 1..195 score: 2.7
IPR012337	Ribonuclease H-like	SUPERFAMILY	53098	Ribonuclease H-like	coord: 3..199 score: 1.3
IPR023160	Ribonuclease HII, helix-loop-helix cap domain	GENE3D	1.10.10.460	no description	coord: 152..194 score: 4.3

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>CV091128 ID=CV091128; Name=CV091128; organism=Vaccinium corymbosum; type=EST; length=749bp
GCAGTCTCATACCAGAAGACTCTTTCCTCATTGAACTTTGCAGATTCGAA
AACTCTGAAAGAAGAAAAAAGGGAAGAATTATTTGAAAATTTGAAGACTG
ATGAATCTATCGGATGGGAAGTTGATGTCATCGATCCAAGGGAGCTCTCA
GCTAAAATGTTGAAGAAAAACAAAATAAACCTCAATGAAATTTCACACGA
GTCTGCTATGGGTCTTGTCAAAAGGGTGGTGAACTTGGGAGTTCTTTTAA
CTGAGGTTTATGTGGATACTGTGGGAGATCCAGAAAAGTATCGAATTAAA
TTGTCCGAACGGTTCCCAGGTATCAAATTTGTTGTTGCAAAGAAAGCTGA
TAGTCTTTATCCGGTTGTAAGTGGAGCAAGCATCGTTGCAAAGGTAACAA
GAGACCGAGCCGTGAGGAATTGGGTGCTTGATGAAACTGCTGAAAACATG
CATCGGAACTTCGGCTCANGTTACCCTGGAGATCCTGGAACGAAGTCTTG
GTTAGAGCATCACAAACATCATGTATTTGGGTTCCCAACATTGGTCCGAT
TCAGTTGGGGCACTTGCACTCCCTACTTCAAAGACATCGTTGAAGTGCTG
TGGGAATCTGATAAAACGGATGAAGATGCTTCCTCTACTAGGGGCAGCAA
GCGGCAATTAACGTTGAGCGGTGTTGGCTTTGCTGGATTGAAGCGGAAAA
GTGAAGAAATTGAGTCCAGTGGCAAAGGACGCTGCAAATTTTTCCAGTC

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003723	RNA binding
GO:0004523	RNA-DNA hybrid ribonuclease activity
GO:0003676	nucleic acid binding

Vocabulary: **Biological Process**
Term	Definition
GO:0016070	RNA metabolic process

Vocabulary: **KEGG ORTHOLOGY**
Term	Definition
K10743	RNASEH2A; ribonuclease H2 subunit A [EC:3.1.26.4]

Vocabulary: **KEGG PATHWAY**
Term	Definition
ko03030	DNA replication

Vocabulary: **INTERPRO**
Term	Definition
IPR001352	RNase_HII/HIII
IPR004649	RNase_H2_suA
IPR012337	RNaseH-like_sf
IPR023160	RNase_HII_hlx-loop-hlx_cap_dom
noIPR	unintegrated