DW043075
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DW043075 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s08670.1 () HSP 1 Score: 114.775 bits (286), Expect = 6.187e-26 Identity = 61/107 (57.01%), Postives = 73/107 (68.22%), Query Frame = 3 Query: 120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI-PSTTVSKTRSRSNLRH-----CHQTPFLQLHRRGFLGYFHSRCAAK 422 MED K++ APWLSVPQFGDW+Q+G +PDYS+DFSKIREMRKQNKRD SRASLG +EELI P+ T +KT + RH H +P RR YF+ C K Sbjct: 1 MEDRKDQKNAPWLSVPQFGDWDQKGELPDYSVDFSKIREMRKQNKRDASRASLGKEEELINPTATTAKTAQTHDHRHHYHQDHHDSP---ATRRSIFSYFN--CCVK 102
BLAST of DW043075 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0007s06610.1 () HSP 1 Score: 113.62 bits (283), Expect = 1.378e-25 Identity = 54/80 (67.50%), Postives = 68/80 (85.00%), Query Frame = 3 Query: 120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI-PSTTVSK-TRSRSNLRHCH 353 MED K++ APWLSVPQFGDW+Q+G +PDYS+DFSKIREMRKQNK+DVSRASLGN+EELI P+ T +K +++ + RH H Sbjct: 1 MEDRKDQKNAPWLSVPQFGDWDQKGELPDYSLDFSKIREMRKQNKKDVSRASLGNEEELINPTATAAKPAQTQDHHRHHH 80
BLAST of DW043075 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s07190.1 () HSP 1 Score: 57.3806 bits (137), Expect = 1.172e-8 Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 3 Query: 135 EKNTAPWLSVPQFGDWEQQGAVP-DYSMDFSKIREMRKQNKRDVSRASLGNDEELI 299 EKN LSVPQFG W+ + VP +YSM F++ R RKQ+K DV ASLGN+ EL+ Sbjct: 23 EKNGG--LSVPQFGAWDSKNPVPTNYSMVFTRARANRKQHKSDVRHASLGNERELL 76
BLAST of DW043075 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s28010.1 () HSP 1 Score: 55.4546 bits (132), Expect = 4.455e-8 Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 3 Query: 156 LSVPQFGDWEQQGAVP-DYSMDFSKIREMRKQNKRDVSRASLGNDEELI 299 LSVPQFG W + VP DYS+ F++ R R+Q+K DV ASLGN+ EL+ Sbjct: 10 LSVPQFGGWNSKNPVPTDYSVVFTQARANRRQHKSDVRHASLGNERELL 58
BLAST of DW043075 vs. P. persica 1.0 peptide
Match: ppa013840m () HSP 1 Score: 118.627 bits (296), Expect = 3.019e-27 Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 3 Query: 120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVS-KTRSRSNLRHCHQTPFLQLHRRGFLGYFH 404 MED KEKN APWLSVPQFGDW+Q+G VPDYS+DFSKIREMRKQNKRDVSRASLGN+EELI + T + + + H HQ RR YF+ Sbjct: 1 MEDRKEKN-APWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELIATNTANVEPPHNDHHPHYHQRHHSPTTRRSIFSYFN 95
BLAST of DW043075 vs. TrEMBL
Match: D7SW64|D7SW64_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022234001 PE=4 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 1.287e-24 Identity = 60/94 (63.83%), Postives = 70/94 (74.47%), Query Frame = 3 Query: 120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTRSRSNLRHCHQTPFLQLHRRGFLGYF 401 MED KEK APWLSVPQFGDW+Q+G VPDYS+DFSKIREMRKQNKRDVSRASLGN+EEL+ T + +++ H HQ+ RR LG F Sbjct: 1 MEDRKEK-AAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELVAPPTTNADTRQTDHHHYHQS-HSPTGRRSILGCF 92
BLAST of DW043075 vs. TrEMBL
Match: A9PBR9|A9PBR9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_818318 PE=4 SV=1) HSP 1 Score: 114.775 bits (286), Expect = 8.342e-24 Identity = 61/107 (57.01%), Postives = 73/107 (68.22%), Query Frame = 3 Query: 120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI-PSTTVSKTRSRSNLRH-----CHQTPFLQLHRRGFLGYFHSRCAAK 422 MED K++ APWLSVPQFGDW+Q+G +PDYS+DFSKIREMRKQNKRD SRASLG +EELI P+ T +KT + RH H +P RR YF+ C K Sbjct: 1 MEDRKDQKNAPWLSVPQFGDWDQKGELPDYSVDFSKIREMRKQNKRDASRASLGKEEELINPTATTAKTAQTHDHRHHYHQDHHDSP---ATRRSIFSYFN--CCVK 102
BLAST of DW043075 vs. TrEMBL
Match: B9HG23|B9HG23_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_832289 PE=4 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.858e-23 Identity = 54/80 (67.50%), Postives = 68/80 (85.00%), Query Frame = 3 Query: 120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI-PSTTVSK-TRSRSNLRHCH 353 MED K++ APWLSVPQFGDW+Q+G +PDYS+DFSKIREMRKQNK+DVSRASLGN+EELI P+ T +K +++ + RH H Sbjct: 1 MEDRKDQKNAPWLSVPQFGDWDQKGELPDYSLDFSKIREMRKQNKKDVSRASLGNEEELINPTATAAKPAQTQDHHRHHH 80
BLAST of DW043075 vs. TrEMBL
Match: C6TMG6|C6TMG6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 9.223e-23 Identity = 60/99 (60.61%), Postives = 71/99 (71.72%), Query Frame = 3 Query: 120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTRS----RSNLRHCHQTPFLQLHRRGFLGYFH 404 ME SKEKN APWLSVPQFGDW+Q+G V DYS+DFSKIREMRKQNK ++SRASLGN+EEL+ S+ + T + H HQT RR FL YF+ Sbjct: 1 MEQSKEKN-APWLSVPQFGDWDQKGQVSDYSLDFSKIREMRKQNKTNISRASLGNEEELMASSATNNTSTVHSDDHQHPHYHQTN-SPTTRRSFLSYFN 97
BLAST of DW043075 vs. TrEMBL
Match: C6SXU9|C6SXU9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 108.227 bits (269), Expect = 7.808e-22 Identity = 60/105 (57.14%), Postives = 70/105 (66.67%), Query Frame = 3 Query: 120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTR----SRSNLRHCHQTPFLQLHRRGFLGYFHSRCAAK 422 M+ KEKN PWLSVPQFGDW+Q+G VPDYS+DFSKIRE RKQNK ++SRASLGN+EE + STT S S H HQT R+ FL YF+ C K Sbjct: 1 MDRRKEKN-GPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGNEEEFMDSTTSSSVNTGHSSEHPQPHYHQTN-SPTARKSFLSYFN--CCVK 101
BLAST of DW043075 vs. TrEMBL
Match: Q9SMK3|Q9SMK3_CICAR (Putative uncharacterized protein (Fragment) OS=Cicer arietinum PE=2 SV=1) HSP 1 Score: 107.842 bits (268), Expect = 1.020e-21 Identity = 59/104 (56.73%), Postives = 73/104 (70.19%), Query Frame = 3 Query: 120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTRSRSNLR---HCHQTPFLQLHRRGFLGYFHSRCAAK 422 M+ +KEKN APWLSVPQFG+W+Q+G +PDYS+DFSKIREMRKQNK + SRASLGN+EEL ++ + + N R H HQT RR FL YF+ C K Sbjct: 6 MDQNKEKN-APWLSVPQFGEWDQKGPLPDYSLDFSKIREMRKQNKTNTSRASLGNEEELNMASNKNNISTDHNERQHPHYHQTN-SPTTRRSFLSYFN--CCVK 105
BLAST of DW043075 vs. TrEMBL
Match: C6SVC2|C6SVC2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.967e-21 Identity = 60/104 (57.69%), Postives = 71/104 (68.27%), Query Frame = 3 Query: 120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTRSRSNLR---HCHQTPFLQLHRRGFLGYFHSRCAAK 422 ME +KEKN APWLSVPQFGDW+Q+ VPDYS+DFSKIRE RKQNK ++SRASLGN+EEL S T + S+ H +QT RR FL YF+ C K Sbjct: 1 MEQNKEKN-APWLSVPQFGDWDQKEQVPDYSLDFSKIRETRKQNKTNISRASLGNEEELTASATNNANTVHSDEHQHPHYNQTN-SPTSRRSFLSYFN--CCVK 100
BLAST of DW043075 vs. TrEMBL
Match: B5M1W8|B5M1W8_RHEAU (Putative uncharacterized protein OS=Rheum australe PE=4 SV=1) HSP 1 Score: 106.301 bits (264), Expect = 2.967e-21 Identity = 55/101 (54.46%), Postives = 67/101 (66.34%), Query Frame = 3 Query: 120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTRSRSNLRHCHQTPFLQLHRRGFLGYFHSRCAAK 422 MED K++ PWLSVPQFG+W+Q+G VPDYS+DF+KIRE RK NKRD SRASLGN+EELI T + + + H Q RR FL YF+ C K Sbjct: 1 MEDPKQEKNGPWLSVPQFGEWDQKGGVPDYSLDFTKIRENRKLNKRDPSRASLGNEEELINPTAPANVAAPNADHHLDQDNSPST-RRSFLSYFN--CCVK 98
BLAST of DW043075 vs. TrEMBL
Match: B7U9U8|B7U9U8_CARAS (AT5G09960-like protein OS=Cardaminopsis arenosa PE=4 SV=1) HSP 1 Score: 103.605 bits (257), Expect = 1.923e-20 Identity = 54/88 (61.36%), Postives = 67/88 (76.14%), Query Frame = 3 Query: 123 EDSKEKNTAPWLSVPQFGDWEQQGA--VPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI-PSTTVSKTRSRSNLRHCHQTPFLQLH 377 +D KEKNT PWLSVPQFGDW+Q+G +PDYSMDF+KIREMRKQNKRD SRASLGN+EELI P + + T + + ++ +Q F H Sbjct: 3 DDRKEKNT-PWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELIKPPESATSTANLTTVQSENQREFSPSH 89
BLAST of DW043075 vs. TrEMBL
Match: Q67XU1|Q67XU1_ARATH (At5g09960 OS=Arabidopsis thaliana GN=At5g09960 PE=1 SV=1) HSP 1 Score: 103.219 bits (256), Expect = 2.512e-20 Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 3 Query: 123 EDSKEKNTAPWLSVPQFGDWEQQGA--VPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI-PSTTVSKTRSRSNLRHCHQTPFLQLH 377 +D KEKNT PWLSVPQFGDW+Q+G +PDYSMDF+KIREMRKQNKRD SRASLGN+EELI P + + T + ++ +Q F H Sbjct: 3 DDRKEKNT-PWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELIKPPESATSTAELTTVQSENQREFSPSH 89
BLAST of DW043075 vs. Vitis vinifera peptide
Match: GSVIVT01022234001 (assembled CDS) HSP 1 Score: 117.472 bits (293), Expect = 5.790e-27 Identity = 60/94 (63.83%), Postives = 70/94 (74.47%), Query Frame = 3 Query: 120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTRSRSNLRHCHQTPFLQLHRRGFLGYF 401 MED KEK APWLSVPQFGDW+Q+G VPDYS+DFSKIREMRKQNKRDVSRASLGN+EEL+ T + +++ H HQ+ RR LG F Sbjct: 1 MEDRKEK-AAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELVAPPTTNADTRQTDHHHYHQS-HSPTGRRSILGCF 92
BLAST of DW043075 vs. Vitis vinifera peptide
Match: GSVIVT01037326001 (assembled CDS) HSP 1 Score: 62.7734 bits (151), Expect = 1.692e-10 Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 3 Query: 120 MEDSKEKNTAPWLSVPQFGDWEQQ-GAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIP 302 ME+ KEKN W+SVPQFG W+Q+ G +YSM FS+ R +KQ K D++ SLGN+ EL P Sbjct: 48 MENRKEKNA--WMSVPQFGGWDQKTGGATNYSMIFSQARANKKQQKADINN-SLGNERELTP 106
BLAST of DW043075 vs. TAIR peptide
Match: AT5G09960.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:3106503-3107658 FORWARD LENGTH=112) HSP 1 Score: 103.219 bits (256), Expect = 1.638e-22 Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 3 Query: 123 EDSKEKNTAPWLSVPQFGDWEQQGA--VPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI-PSTTVSKTRSRSNLRHCHQTPFLQLH 377 +D KEKNT PWLSVPQFGDW+Q+G +PDYSMDF+KIREMRKQNKRD SRASLGN+EELI P + + T + ++ +Q F H Sbjct: 3 DDRKEKNT-PWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELIKPPESATSTAELTTVQSENQREFSPSH 89
BLAST of DW043075 vs. TAIR peptide
Match: AT5G64850.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:25921585-25923038 FORWARD LENGTH=114) HSP 1 Score: 101.293 bits (251), Expect = 6.224e-22 Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 3 Query: 120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI 299 MED KE +PWLSVPQFGDW+Q+G DYSMDFSKIREMRK NKRD SRASLGN+EELI Sbjct: 1 MEDRKENKNSPWLSVPQFGDWDQKGGSIDYSMDFSKIREMRKLNKRDASRASLGNEEELI 60
BLAST of DW043075 vs. TAIR peptide
Match: AT5G19473.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr5:6569268-6570680 FORWARD LENGTH=99) HSP 1 Score: 65.855 bits (159), Expect = 2.898e-11 Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 3 Query: 132 KEKNTAPWLSVPQFGDWEQQGA--VPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTRSRSNLRHCHQT 359 K + A W VPQFG W+Q+G +YS+ FSK R RKQNK V +SLG+++EL+ VS R+ L H H+T Sbjct: 3 KRRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGVRHSSLGSEQELM----VSVRRNHQQLHHRHET 76 The following BLAST results are available for this feature:
BLAST of DW043075 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 4
BLAST of DW043075 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of DW043075 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 10
BLAST of DW043075 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 2
BLAST of DW043075 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 3
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DW043075 ID=DW043075; Name=DW043075; organism=Vaccinium corymbosum; type=EST; length=770bpback to top |