DW043075

EST Overview
NameDW043075
Unique NameDW043075
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length770
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of DW043075 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s08670.1 ()

HSP 1 Score: 114.775 bits (286), Expect = 6.187e-26
Identity = 61/107 (57.01%), Postives = 73/107 (68.22%), Query Frame = 3
Query:  120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI-PSTTVSKTRSRSNLRH-----CHQTPFLQLHRRGFLGYFHSRCAAK 422
            MED K++  APWLSVPQFGDW+Q+G +PDYS+DFSKIREMRKQNKRD SRASLG +EELI P+ T +KT    + RH      H +P     RR    YF+  C  K
Sbjct:    1 MEDRKDQKNAPWLSVPQFGDWDQKGELPDYSVDFSKIREMRKQNKRDASRASLGKEEELINPTATTAKTAQTHDHRHHYHQDHHDSP---ATRRSIFSYFN--CCVK 102          
BLAST of DW043075 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0007s06610.1 ()

HSP 1 Score: 113.62 bits (283), Expect = 1.378e-25
Identity = 54/80 (67.50%), Postives = 68/80 (85.00%), Query Frame = 3
Query:  120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI-PSTTVSK-TRSRSNLRHCH 353
            MED K++  APWLSVPQFGDW+Q+G +PDYS+DFSKIREMRKQNK+DVSRASLGN+EELI P+ T +K  +++ + RH H
Sbjct:    1 MEDRKDQKNAPWLSVPQFGDWDQKGELPDYSLDFSKIREMRKQNKKDVSRASLGNEEELINPTATAAKPAQTQDHHRHHH 80          
BLAST of DW043075 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s07190.1 ()

HSP 1 Score: 57.3806 bits (137), Expect = 1.172e-8
Identity = 31/56 (55.36%), Postives = 39/56 (69.64%), Query Frame = 3
Query:  135 EKNTAPWLSVPQFGDWEQQGAVP-DYSMDFSKIREMRKQNKRDVSRASLGNDEELI 299
            EKN    LSVPQFG W+ +  VP +YSM F++ R  RKQ+K DV  ASLGN+ EL+
Sbjct:   23 EKNGG--LSVPQFGAWDSKNPVPTNYSMVFTRARANRKQHKSDVRHASLGNERELL 76          
BLAST of DW043075 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s28010.1 ()

HSP 1 Score: 55.4546 bits (132), Expect = 4.455e-8
Identity = 27/49 (55.10%), Postives = 35/49 (71.43%), Query Frame = 3
Query:  156 LSVPQFGDWEQQGAVP-DYSMDFSKIREMRKQNKRDVSRASLGNDEELI 299
            LSVPQFG W  +  VP DYS+ F++ R  R+Q+K DV  ASLGN+ EL+
Sbjct:   10 LSVPQFGGWNSKNPVPTDYSVVFTQARANRRQHKSDVRHASLGNERELL 58          
BLAST of DW043075 vs. P. persica 1.0 peptide
Match: ppa013840m ()

HSP 1 Score: 118.627 bits (296), Expect = 3.019e-27
Identity = 61/96 (63.54%), Postives = 70/96 (72.92%), Query Frame = 3
Query:  120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVS-KTRSRSNLRHCHQTPFLQLHRRGFLGYFH 404
            MED KEKN APWLSVPQFGDW+Q+G VPDYS+DFSKIREMRKQNKRDVSRASLGN+EELI + T + +     +  H HQ       RR    YF+
Sbjct:    1 MEDRKEKN-APWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELIATNTANVEPPHNDHHPHYHQRHHSPTTRRSIFSYFN 95          
BLAST of DW043075 vs. TrEMBL
Match: D7SW64|D7SW64_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_31.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00022234001 PE=4 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 1.287e-24
Identity = 60/94 (63.83%), Postives = 70/94 (74.47%), Query Frame = 3
Query:  120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTRSRSNLRHCHQTPFLQLHRRGFLGYF 401
            MED KEK  APWLSVPQFGDW+Q+G VPDYS+DFSKIREMRKQNKRDVSRASLGN+EEL+   T +    +++  H HQ+      RR  LG F
Sbjct:    1 MEDRKEK-AAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELVAPPTTNADTRQTDHHHYHQS-HSPTGRRSILGCF 92          
BLAST of DW043075 vs. TrEMBL
Match: A9PBR9|A9PBR9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_818318 PE=4 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 8.342e-24
Identity = 61/107 (57.01%), Postives = 73/107 (68.22%), Query Frame = 3
Query:  120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI-PSTTVSKTRSRSNLRH-----CHQTPFLQLHRRGFLGYFHSRCAAK 422
            MED K++  APWLSVPQFGDW+Q+G +PDYS+DFSKIREMRKQNKRD SRASLG +EELI P+ T +KT    + RH      H +P     RR    YF+  C  K
Sbjct:    1 MEDRKDQKNAPWLSVPQFGDWDQKGELPDYSVDFSKIREMRKQNKRDASRASLGKEEELINPTATTAKTAQTHDHRHHYHQDHHDSP---ATRRSIFSYFN--CCVK 102          
BLAST of DW043075 vs. TrEMBL
Match: B9HG23|B9HG23_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_832289 PE=4 SV=1)

HSP 1 Score: 113.62 bits (283), Expect = 1.858e-23
Identity = 54/80 (67.50%), Postives = 68/80 (85.00%), Query Frame = 3
Query:  120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI-PSTTVSK-TRSRSNLRHCH 353
            MED K++  APWLSVPQFGDW+Q+G +PDYS+DFSKIREMRKQNK+DVSRASLGN+EELI P+ T +K  +++ + RH H
Sbjct:    1 MEDRKDQKNAPWLSVPQFGDWDQKGELPDYSLDFSKIREMRKQNKKDVSRASLGNEEELINPTATAAKPAQTQDHHRHHH 80          
BLAST of DW043075 vs. TrEMBL
Match: C6TMG6|C6TMG6_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 111.309 bits (277), Expect = 9.223e-23
Identity = 60/99 (60.61%), Postives = 71/99 (71.72%), Query Frame = 3
Query:  120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTRS----RSNLRHCHQTPFLQLHRRGFLGYFH 404
            ME SKEKN APWLSVPQFGDW+Q+G V DYS+DFSKIREMRKQNK ++SRASLGN+EEL+ S+  + T +         H HQT      RR FL YF+
Sbjct:    1 MEQSKEKN-APWLSVPQFGDWDQKGQVSDYSLDFSKIREMRKQNKTNISRASLGNEEELMASSATNNTSTVHSDDHQHPHYHQTN-SPTTRRSFLSYFN 97          
BLAST of DW043075 vs. TrEMBL
Match: C6SXU9|C6SXU9_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 7.808e-22
Identity = 60/105 (57.14%), Postives = 70/105 (66.67%), Query Frame = 3
Query:  120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTR----SRSNLRHCHQTPFLQLHRRGFLGYFHSRCAAK 422
            M+  KEKN  PWLSVPQFGDW+Q+G VPDYS+DFSKIRE RKQNK ++SRASLGN+EE + STT S       S     H HQT      R+ FL YF+  C  K
Sbjct:    1 MDRRKEKN-GPWLSVPQFGDWDQKGQVPDYSLDFSKIRETRKQNKTNISRASLGNEEEFMDSTTSSSVNTGHSSEHPQPHYHQTN-SPTARKSFLSYFN--CCVK 101          
BLAST of DW043075 vs. TrEMBL
Match: Q9SMK3|Q9SMK3_CICAR (Putative uncharacterized protein (Fragment) OS=Cicer arietinum PE=2 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 1.020e-21
Identity = 59/104 (56.73%), Postives = 73/104 (70.19%), Query Frame = 3
Query:  120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTRSRSNLR---HCHQTPFLQLHRRGFLGYFHSRCAAK 422
            M+ +KEKN APWLSVPQFG+W+Q+G +PDYS+DFSKIREMRKQNK + SRASLGN+EEL  ++  +   +  N R   H HQT      RR FL YF+  C  K
Sbjct:    6 MDQNKEKN-APWLSVPQFGEWDQKGPLPDYSLDFSKIREMRKQNKTNTSRASLGNEEELNMASNKNNISTDHNERQHPHYHQTN-SPTTRRSFLSYFN--CCVK 105          
BLAST of DW043075 vs. TrEMBL
Match: C6SVC2|C6SVC2_SOYBN (Putative uncharacterized protein OS=Glycine max PE=4 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.967e-21
Identity = 60/104 (57.69%), Postives = 71/104 (68.27%), Query Frame = 3
Query:  120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTRSRSNLR---HCHQTPFLQLHRRGFLGYFHSRCAAK 422
            ME +KEKN APWLSVPQFGDW+Q+  VPDYS+DFSKIRE RKQNK ++SRASLGN+EEL  S T +     S+     H +QT      RR FL YF+  C  K
Sbjct:    1 MEQNKEKN-APWLSVPQFGDWDQKEQVPDYSLDFSKIRETRKQNKTNISRASLGNEEELTASATNNANTVHSDEHQHPHYNQTN-SPTSRRSFLSYFN--CCVK 100          
BLAST of DW043075 vs. TrEMBL
Match: B5M1W8|B5M1W8_RHEAU (Putative uncharacterized protein OS=Rheum australe PE=4 SV=1)

HSP 1 Score: 106.301 bits (264), Expect = 2.967e-21
Identity = 55/101 (54.46%), Postives = 67/101 (66.34%), Query Frame = 3
Query:  120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTRSRSNLRHCHQTPFLQLHRRGFLGYFHSRCAAK 422
            MED K++   PWLSVPQFG+W+Q+G VPDYS+DF+KIRE RK NKRD SRASLGN+EELI  T  +   + +   H  Q       RR FL YF+  C  K
Sbjct:    1 MEDPKQEKNGPWLSVPQFGEWDQKGGVPDYSLDFTKIRENRKLNKRDPSRASLGNEEELINPTAPANVAAPNADHHLDQDNSPST-RRSFLSYFN--CCVK 98          
BLAST of DW043075 vs. TrEMBL
Match: B7U9U8|B7U9U8_CARAS (AT5G09960-like protein OS=Cardaminopsis arenosa PE=4 SV=1)

HSP 1 Score: 103.605 bits (257), Expect = 1.923e-20
Identity = 54/88 (61.36%), Postives = 67/88 (76.14%), Query Frame = 3
Query:  123 EDSKEKNTAPWLSVPQFGDWEQQGA--VPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI-PSTTVSKTRSRSNLRHCHQTPFLQLH 377
            +D KEKNT PWLSVPQFGDW+Q+G   +PDYSMDF+KIREMRKQNKRD SRASLGN+EELI P  + + T + + ++  +Q  F   H
Sbjct:    3 DDRKEKNT-PWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELIKPPESATSTANLTTVQSENQREFSPSH 89          
BLAST of DW043075 vs. TrEMBL
Match: Q67XU1|Q67XU1_ARATH (At5g09960 OS=Arabidopsis thaliana GN=At5g09960 PE=1 SV=1)

HSP 1 Score: 103.219 bits (256), Expect = 2.512e-20
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 3
Query:  123 EDSKEKNTAPWLSVPQFGDWEQQGA--VPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI-PSTTVSKTRSRSNLRHCHQTPFLQLH 377
            +D KEKNT PWLSVPQFGDW+Q+G   +PDYSMDF+KIREMRKQNKRD SRASLGN+EELI P  + + T   + ++  +Q  F   H
Sbjct:    3 DDRKEKNT-PWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELIKPPESATSTAELTTVQSENQREFSPSH 89          
BLAST of DW043075 vs. Vitis vinifera peptide
Match: GSVIVT01022234001 (assembled CDS)

HSP 1 Score: 117.472 bits (293), Expect = 5.790e-27
Identity = 60/94 (63.83%), Postives = 70/94 (74.47%), Query Frame = 3
Query:  120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTRSRSNLRHCHQTPFLQLHRRGFLGYF 401
            MED KEK  APWLSVPQFGDW+Q+G VPDYS+DFSKIREMRKQNKRDVSRASLGN+EEL+   T +    +++  H HQ+      RR  LG F
Sbjct:    1 MEDRKEK-AAPWLSVPQFGDWDQKGQVPDYSLDFSKIREMRKQNKRDVSRASLGNEEELVAPPTTNADTRQTDHHHYHQS-HSPTGRRSILGCF 92          
BLAST of DW043075 vs. Vitis vinifera peptide
Match: GSVIVT01037326001 (assembled CDS)

HSP 1 Score: 62.7734 bits (151), Expect = 1.692e-10
Identity = 33/62 (53.23%), Postives = 43/62 (69.35%), Query Frame = 3
Query:  120 MEDSKEKNTAPWLSVPQFGDWEQQ-GAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIP 302
            ME+ KEKN   W+SVPQFG W+Q+ G   +YSM FS+ R  +KQ K D++  SLGN+ EL P
Sbjct:   48 MENRKEKNA--WMSVPQFGGWDQKTGGATNYSMIFSQARANKKQQKADINN-SLGNERELTP 106          
BLAST of DW043075 vs. TAIR peptide
Match: AT5G09960.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G64850.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:3106503-3107658 FORWARD LENGTH=112)

HSP 1 Score: 103.219 bits (256), Expect = 1.638e-22
Identity = 54/88 (61.36%), Postives = 66/88 (75.00%), Query Frame = 3
Query:  123 EDSKEKNTAPWLSVPQFGDWEQQGA--VPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI-PSTTVSKTRSRSNLRHCHQTPFLQLH 377
            +D KEKNT PWLSVPQFGDW+Q+G   +PDYSMDF+KIREMRKQNKRD SRASLGN+EELI P  + + T   + ++  +Q  F   H
Sbjct:    3 DDRKEKNT-PWLSVPQFGDWDQKGGGTMPDYSMDFTKIREMRKQNKRDPSRASLGNEEELIKPPESATSTAELTTVQSENQREFSPSH 89          
BLAST of DW043075 vs. TAIR peptide
Match: AT5G64850.1 (| Symbols: | FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: RPM1-interacting protein 4, defence response (InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G09960.1); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). | chr5:25921585-25923038 FORWARD LENGTH=114)

HSP 1 Score: 101.293 bits (251), Expect = 6.224e-22
Identity = 47/60 (78.33%), Postives = 51/60 (85.00%), Query Frame = 3
Query:  120 MEDSKEKNTAPWLSVPQFGDWEQQGAVPDYSMDFSKIREMRKQNKRDVSRASLGNDEELI 299
            MED KE   +PWLSVPQFGDW+Q+G   DYSMDFSKIREMRK NKRD SRASLGN+EELI
Sbjct:    1 MEDRKENKNSPWLSVPQFGDWDQKGGSIDYSMDFSKIREMRKLNKRDASRASLGNEEELI 60          
BLAST of DW043075 vs. TAIR peptide
Match: AT5G19473.1 (| Symbols: | RPM1-interacting protein 4 (RIN4) family protein | chr5:6569268-6570680 FORWARD LENGTH=99)

HSP 1 Score: 65.855 bits (159), Expect = 2.898e-11
Identity = 35/78 (44.87%), Postives = 47/78 (60.26%), Query Frame = 3
Query:  132 KEKNTAPWLSVPQFGDWEQQGA--VPDYSMDFSKIREMRKQNKRDVSRASLGNDEELIPSTTVSKTRSRSNLRHCHQT 359
            K +  A W  VPQFG W+Q+G     +YS+ FSK R  RKQNK  V  +SLG+++EL+    VS  R+   L H H+T
Sbjct:    3 KRRENAAWTPVPQFGGWDQKGPNDATNYSVVFSKARANRKQNKAGVRHSSLGSEQELM----VSVRRNHQQLHHRHET 76          
The following BLAST results are available for this feature:
BLAST of DW043075 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
POPTR_0005s08670.16.187e-2657.01[more]
POPTR_0007s06610.11.378e-2567.50[more]
POPTR_0009s07190.11.172e-855.36[more]
POPTR_0001s28010.14.455e-855.10[more]
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BLAST of DW043075 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa013840m3.019e-2763.54[more]
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BLAST of DW043075 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
D7SW64|D7SW64_VITVI1.287e-2463.83Whole genome shotgun sequence of line PN40024, sca... [more]
A9PBR9|A9PBR9_POPTR8.342e-2457.01Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9HG23|B9HG23_POPTR1.858e-2367.50Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
C6TMG6|C6TMG6_SOYBN9.223e-2360.61Putative uncharacterized protein OS=Glycine max PE... [more]
C6SXU9|C6SXU9_SOYBN7.808e-2257.14Putative uncharacterized protein OS=Glycine max PE... [more]
Q9SMK3|Q9SMK3_CICAR1.020e-2156.73Putative uncharacterized protein (Fragment) OS=Cic... [more]
C6SVC2|C6SVC2_SOYBN2.967e-2157.69Putative uncharacterized protein OS=Glycine max PE... [more]
B5M1W8|B5M1W8_RHEAU2.967e-2154.46Putative uncharacterized protein OS=Rheum australe... [more]
B7U9U8|B7U9U8_CARAS1.923e-2061.36AT5G09960-like protein OS=Cardaminopsis arenosa PE... [more]
Q67XU1|Q67XU1_ARATH2.512e-2061.36At5g09960 OS=Arabidopsis thaliana GN=At5g09960 PE=... [more]
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BLAST of DW043075 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 2
Match NameE-valueIdentityDescription
GSVIVT010222340015.790e-2763.83assembled CDS[more]
GSVIVT010373260011.692e-1053.23assembled CDS[more]
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BLAST of DW043075 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 3
Match NameE-valueIdentityDescription
AT5G09960.11.638e-2261.36| Symbols: | FUNCTIONS IN: molecular_function unk... [more]
AT5G64850.16.224e-2278.33| Symbols: | FUNCTIONS IN: molecular_function unk... [more]
AT5G19473.12.898e-1144.87| Symbols: | RPM1-interacting protein 4 (RIN4) fa... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 27..38
score
NoneNo IPR availableSEGsegsegcoord: 12..22
score
NoneNo IPR availableSEGsegsegcoord: 59..72
score: NAcoord: 73..84
score
NoneNo IPR availableSEGsegsegcoord: 1..11
score: NAcoord: 61..76
score
NoneNo IPR availableSEGsegsegcoord: 28..42
score
NoneNo IPR availableSEGsegsegcoord: 28..43
score
NoneNo IPR availableSEGsegsegcoord: 18..30
score: NAcoord: 46..57
score
NoneNo IPR availableSEGsegsegcoord: 47..61
score
IPR008700RPM1-interacting protein 4, defence responsePFAMPF05627AvrRpt-cleavagecoord: 21..50
score: 2.1

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043075 ID=DW043075; Name=DW043075; organism=Vaccinium corymbosum; type=EST; length=770bp
AGCGTGGTCGCGGCCGAGGTACGCGGGGAACCATTATTACTCTCTCTCTC
TCTTTCTCTCTCTCTCATCAGACGTCTTTGTGGTAGAAACCGGAGCCCTA
ATCGGAAACACTCAACTTCATGGAAGATAGCAAGGAGAAGAACACCGCAC
CATGGTTATCAGTTCCCCAGTTTGGGGATTGGGAACAACAGGGGGCAGTG
CCAGATTACTCCATGGATTTCTCCAAAATCAGAGAAATGAGGAAACAAAA
CAAGAGGGATGTTTCAAGAGCCAGTCTTGGAAATGACGAAGAACTGATCC
CCTCAACAACCGTGTCCAAAACCCGGTCCCGCAGTAACCTCCGGCATTGC
CACCAGACCCCCTTCCTCCAACTGCACAGGAGAGGCTTTCTCGGCTACTT
CCACTCACGCTGTGCCGCAAAGCTCGCAGAATACCCCTTCCGCCAGTTTT
TCACCCCCCCGCTCTCAAAACCTACTCACATTGTCACTCAGCCTATGTAC
TCCGTGCATACTCGCTCCCTGCCCCCGGCCAGCCCCCACCACAACGGCCC
ACTCACCCCACCGCTAACATCACACTTCGCCCCCACTAACCTCAACTACC
TCATCACCCCATCCCACATAGGGCACGATCCATTCACCACACCCCCGNCA
CACTGAAACATCGGGACAAACCACCACTAGCCACTCTACACCCCCCACCT
CACACTTCCACCCTTGAAAACACAACATCACAACCACTTCTCCCCACCCA
CGCCCTTACCTCCCCCAACA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated
IPR008700TypeIII_avirulence_cleave