DW043093

EST Overview
NameDW043093
Unique NameDW043093
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length665
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
BLAST of DW043093 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s05870.1 ()

HSP 1 Score: 53.9138 bits (128), Expect = 1.031e-7
Identity = 35/100 (35.00%), Postives = 51/100 (51.00%), Query Frame = -1
Query:  327 RRGRYKPDQLQSECNPGAEG-RVEGLWNRLKNKIPGGHGGS-ADQQQSECKPDQRKEGG------GIMDKVKDKIPGVHGGGA---DQQRGECKPDQRRG 593
            R+G  +    Q E   GA+G R EG  +++K+KIPGG GG    + Q  C   + + G       G + ++KDKIPG  GGG     + +G C   + RG
Sbjct:   21 RKGETQGGCNQQEHRGGAQGERKEGFADQMKDKIPGGGGGGHKGETQGGCNQQEHRGGAQGERKEGFVGQMKDKIPGGGGGGVGGKGETQGGCNQQEHRG 120          

HSP 2 Score: 53.1434 bits (126), Expect = 1.759e-7
Identity = 34/92 (36.96%), Postives = 46/92 (50.00%), Query Frame = -1
Query:  351 GRRGRYKPDQLQSECNPGAEG-RVEGLWNRLKNKIPGGHGGSAD---QQQSECKPDQRKEGG------GIMDKVKDKIPGVHGGGADQQRGE 596
            G +G  +    Q E   GA+G R EG   ++K+KIPGG GG      + Q  C   + + G       G + ++KDKIPG  GGG    RGE
Sbjct:   61 GHKGETQGGCNQQEHRGGAQGERKEGFVGQMKDKIPGGGGGGVGGKGETQGGCNQQEHRGGAQGERKEGFVGQMKDKIPGGGGGGVGGVRGE 152          
BLAST of DW043093 vs. TrEMBL
Match: Q68YT3|Q68YT3_VACCO (14 kDa dehydrin OS=Vaccinium corymbosum GN=bbdhn6 PE=4 SV=1)

HSP 1 Score: 159.458 bits (402), Expect = 2.177e-37
Identity = 74/87 (85.06%), Postives = 81/87 (93.10%), Query Frame = -1
Query:  324 RYKPDQLQSECNPGAEGRVEGLWNRLKNKIPGGHGGSADQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD 584
            +YKPDQLQSECNP  + +  GL +++K+KIPGGHGGSADQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD
Sbjct:   16 QYKPDQLQSECNP-EQKKGGGLMDKVKDKIPGGHGGSADQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD 101          
BLAST of DW043093 vs. TrEMBL
Match: O22623|O22623_VACCO (Dehydrin 1 OS=Vaccinium corymbosum GN=bbdhn1 PE=2 SV=1)

HSP 1 Score: 92.4337 bits (228), Expect = 3.269e-17
Identity = 52/107 (48.60%), Postives = 61/107 (57.01%), Query Frame = -1
Query:  324 GRYKPDQLQSECNPGAEGRVEGLWNRLKNKIPGGHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD 587
            G Y+ DQ   E          GL +++K+KIPGG+GGSA                   DQQ+ E K DQRKEGGG+MDKVKD I G  GGGAD+ RGE K DQ RGD
Sbjct:  208 GGYRQDQQHGEYKQDQRKEGGGLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQYRGD 314          

HSP 2 Score: 73.9442 bits (180), Expect = 1.203e-11
Identity = 52/132 (39.39%), Postives = 58/132 (43.94%), Query Frame = -1
Query:  330 GRYKPDQLQSECNPGAEGRVEGLWNRLKNKIPGGHGGSA---------------------------DQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGA-------------------DQQRGECKPDQRR 587
            G YK DQ              GL  ++K+KI GG GGSA                           DQQ  E K DQRKEGGG+MDKVKDKIPG +GG A                   DQQRGE K DQR+
Sbjct:  147 GGYKQDQQLGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQLGGYRQDQQHGEYKQDQRKEGGGLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRK 278          

HSP 3 Score: 63.929 bits (154), Expect = 1.245e-8
Identity = 47/114 (41.23%), Postives = 58/114 (50.88%), Query Frame = -1
Query:  327 GRYKPDQLQSEC----NPGA---EGRVEG--LWNRLKNKIPGGHGGSADQQQSECKPDQ------------------RKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRG 587
            G+Y+ DQ  SE      PG    + R EG  L +++K+KI GG  GSADQ Q   K DQ                   KEGGG++ KVKDKI G  GG ADQ +G    DQ+ G
Sbjct:   86 GKYRHDQQHSEYVQDQQPGGYRQDQRKEGGGLMDKVKDKIHGGGVGSADQHQDGYKQDQLHGGYKQDQQLGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLG 199          

HSP 4 Score: 59.6918 bits (143), Expect = 2.348e-7
Identity = 45/112 (40.18%), Postives = 49/112 (43.75%), Query Frame = -1
Query:  327 KPDQLQSECNPGAEGRVEGLWNRLKNKIPGG--------------HGGSA-----DQQQSEC---------KPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRG 578
            KP Q Q E          GL   LK+KI GG              HG        DQQ SE          + DQRKEGGG+MDKVKDKI G   G ADQ +   K DQ  G
Sbjct:   36 KPGQHQGESRQDQRKEGGGLMGELKDKIHGGGVGTDGGGVGSVDPHGHQGGKYRHDQQHSEYVQDQQPGGYRQDQRKEGGGLMDKVKDKIHGGGVGSADQHQDGYKQDQLHG 147          
BLAST of DW043093 vs. TrEMBL
Match: Q9M5W7|Q9M5W7_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.242e-16
Identity = 54/109 (49.54%), Postives = 64/109 (58.72%), Query Frame = -1
Query:  324 GRYKPDQLQSECNPGAEGRVEGLW--NRLKNKIPGGHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD 587
            G Y+ DQ   E     + R EG W  +++K+KIPGG+GGSA                   DQQ+ E K DQRKEGGG+MDKVKD I G  GGGAD+ RGE K DQ RGD
Sbjct:  102 GGYRQDQQHGEYKQ--DQRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQYRGD 208          

HSP 2 Score: 67.781 bits (164), Expect = 8.622e-10
Identity = 46/111 (41.44%), Postives = 52/111 (46.85%), Query Frame = -1
Query:  330 GLWNRLKNKIPGGHGGSA---------------------------DQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGA-------------------DQQRGECKPDQRR 524
            GL  ++K+KI GG GGSA                           DQQ  E K DQRKEGG +MDKVKDKIPG +GG A                   DQQRGE K DQR+
Sbjct:   62 GLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQLGGYRQDQQHGEYKQDQRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRK 172          
BLAST of DW043093 vs. TrEMBL
Match: Q9M5W5|Q9M5W5_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1)

HSP 1 Score: 90.5077 bits (223), Expect = 1.242e-16
Identity = 54/109 (49.54%), Postives = 64/109 (58.72%), Query Frame = -1
Query:  324 GRYKPDQLQSECNPGAEGRVEGLW--NRLKNKIPGGHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD 587
            G Y+ DQ   E     + R EG W  +++K+KIPGG+GGSA                   DQQ+ E K DQRKEGGG+MDKVKD I G  GGGAD+ RGE K DQ RGD
Sbjct:  214 GGYRQDQQHGEYKQ--DQRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQYRGD 320          

HSP 2 Score: 70.8626 bits (172), Expect = 1.018e-10
Identity = 55/151 (36.42%), Postives = 66/151 (43.71%), Query Frame = -1
Query:  330 RGRYKPDQL----QSECNPGAEGRVE--------------GLWNRLKNKIPGGHGGSA---------------------------DQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGA-------------------DQQRGECKPDQRR 590
            +G YK DQL    + +  PG  G+ +              GL  ++K+KI GG GGSA                           DQQ  E K DQRKEGG +MDKVKDKIPG +GG A                   DQQRGE K DQR+
Sbjct:  134 QGGYKQDQLLGGYRQDQQPGGYGQDQQPGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQLGGYRQDQQHGEYKQDQRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRK 284          
BLAST of DW043093 vs. TrEMBL
Match: Q9M5W8|Q9M5W8_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1)

HSP 1 Score: 88.5817 bits (218), Expect = 4.720e-16
Identity = 53/107 (49.53%), Postives = 61/107 (57.01%), Query Frame = -1
Query:  324 GRYKPDQLQSECNPGAEGRVEGLWNRLKNKIPGGHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD 587
            G YK DQ             EGL +++K+KIPGG+GGSA                   DQQ+ E K DQRKEGGG+MDKVKD I G  GGGAD+ RGE K DQ RGD
Sbjct:   27 GGYKQDQQLGGHRQDQHN--EGLADKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQYRGD 131          
BLAST of DW043093 vs. TrEMBL
Match: Q9M5W6|Q9M5W6_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1)

HSP 1 Score: 82.4185 bits (202), Expect = 3.383e-14
Identity = 54/121 (44.63%), Postives = 63/121 (52.07%), Query Frame = -1
Query:  324 RGRYKPDQLQSECNPGAEGRVE--------------GLWNRLKNKIPGGHGGSADQ------------------QQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD 590
            +G YK DQ      PG  G+ +              GL  ++K+KI GG GGSADQ                  Q+ E K DQRKEGGG+MDKVKD I G  GGGAD+ RGE K DQ RGD
Sbjct:  103 QGGYKQDQ-----QPGGYGQDQQPGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQYRGD 218          

HSP 2 Score: 63.1586 bits (152), Expect = 2.124e-8
Identity = 43/107 (40.19%), Postives = 54/107 (50.47%), Query Frame = -1
Query:  327 RRGRYKPDQLQSECNPGAEGRVEGLWNRLKNKIPGGHGGSADQQQSECKPDQR------------------KEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRG 593
            +RG Y+ DQ             EGL +++K+KI GG  GSADQ Q   K DQ+                  KEGGG++ KVKDKI G  GG ADQ +G    DQ+ G
Sbjct:   70 QRGGYRQDQHN-----------EGLADKVKDKIHGGGVGSADQHQGGYKQDQQPGGYGQDQQPGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLG 165          
BLAST of DW043093 vs. TrEMBL
Match: Q9AR75|Q9AR75_PISVE (Dehydrin OS=Pistacia vera GN=COR PE=2 SV=1)

HSP 1 Score: 66.6254 bits (161), Expect = 1.921e-9
Identity = 34/95 (35.79%), Postives = 52/95 (54.74%), Query Frame = -1
Query:  339 RNSLFEGRRGRYKPDQLQSECNPGAEGRVEGLWNRLKNKIPGGHGGSADQQQSECKPDQRKEGGGIMDKVKDKIPG---VHGGGADQQRGECKPD 614
            +  L++G    +K +Q    C P      EG+  ++KNK+PG  G    QQ   CKP+  +   G+++K+KDK+PG    HG G  Q RGE +P+
Sbjct:   23 QKGLYQGEA--HKVEQHHGVCKPEHGEHKEGMVQKIKNKVPG-QGDGVKQQHGVCKPEHGEHKEGLVEKIKDKVPGQGDQHGHGMQQHRGEYRPE 114          

HSP 2 Score: 57.7658 bits (138), Expect = 8.922e-7
Identity = 31/90 (34.44%), Postives = 49/90 (54.44%), Query Frame = -1
Query:  339 RGRYKPDQLQSECNPGAEGRVEGLWNRLKNKIPGG---HGGSADQQQSECKPDQRKEGGGIMDKVKDKIPG---VHGGGADQQRGECKPD 590
            RG Y+P+  + +         EGL  ++K+K+PG    HG    Q   E +P+  +   G+++K+KDK+PG    HG G  Q RGE +P+
Sbjct:  108 RGEYRPEYGEHK---------EGLVEKIKDKLPGQGDQHGQGVQQHHGEYRPEYGEHKEGLVEKIKDKLPGQGDQHGQGVQQHRGENRPE 188          
The following BLAST results are available for this feature:
BLAST of DW043093 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0013s05870.11.031e-735.00[more]
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BLAST of DW043093 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 7
Match NameE-valueIdentityDescription
Q68YT3|Q68YT3_VACCO2.177e-3785.0614 kDa dehydrin OS=Vaccinium corymbosum GN=bbdhn6 ... [more]
O22623|O22623_VACCO3.269e-1748.60Dehydrin 1 OS=Vaccinium corymbosum GN=bbdhn1 PE=2 ... [more]
Q9M5W7|Q9M5W7_VACCO1.242e-1649.54Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 S... [more]
Q9M5W5|Q9M5W5_VACCO1.242e-1649.54Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 S... [more]
Q9M5W8|Q9M5W8_VACCO4.720e-1649.53Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 S... [more]
Q9M5W6|Q9M5W6_VACCO3.383e-1444.63Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 S... [more]
Q9AR75|Q9AR75_PISVE1.921e-935.79Dehydrin OS=Pistacia vera GN=COR PE=2 SV=1[more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000167DehydrinPFAMPF00257Dehydrincoord: 61..96
score: 1.8
NoneNo IPR availableSEGsegsegcoord: 3..18
score: NAcoord: 40..52
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043093 ID=DW043093; Name=DW043093; organism=Vaccinium corymbosum; type=EST; length=665bp
AGCGTGGTCGCGGCCGAGGTACGCGGGGATATATATATGCTCTCTCTCTC
TCTCTCTCTCTCTCTCCTGTTTTATTTTGCTAGTAAAAAACTTGTTTGAT
CAATCAAGATGAGGCGCTCCGTGCATAGGGTTTCAGCTATATTCCTTGTG
GTGGTGCTTCTGATGGCCAGTACATAAATACACTACAAAATAGATACCGA
ATAAAAAACACACACTCTCATTTCTTTTCCCTCACTTATTTGCATCTCCC
ATGAGACGCTGTCCACACCTAAAGAGTAGCTAGCGTAGAGGCGGAAAAGA
AGACGCGATGATGATTCGATCTAATCGCCGCGGCGCTGATCCGGCTTGCA
CTCGCCGCGCTGTTGATCAGCACCACCACCATGGACGCCAGGGATCTTAT
CCTTCACCTTGTCCATAATCCCTCCACCTTCCTTGCGCTGATCCGGCTTG
CACTCGCTTTGCTGCTGATCAGCACTACCACCATGGCCGCCAGGGATCTT
ATTCTTCAACCTGTTCCATAAGCCCTCCACCCTTCCTTCTGCTCCGGGGT
TGCACTCGCTTTGCAGCTGATCTGGTTTGTACCTGCCCCGGCGGCCCTCA
AAAAGCGAATTCCGCCGCTAATCCATCCCCCAAATGGTCTATACATCCTG
GCGTTTTTACCACCC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0009415response to water
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated
IPR000167Dehydrin