DW043093
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DW043093 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0013s05870.1 () HSP 1 Score: 53.9138 bits (128), Expect = 1.031e-7 Identity = 35/100 (35.00%), Postives = 51/100 (51.00%), Query Frame = -1 Query: 327 RRGRYKPDQLQSECNPGAEG-RVEGLWNRLKNKIPGGHGGS-ADQQQSECKPDQRKEGG------GIMDKVKDKIPGVHGGGA---DQQRGECKPDQRRG 593 R+G + Q E GA+G R EG +++K+KIPGG GG + Q C + + G G + ++KDKIPG GGG + +G C + RG Sbjct: 21 RKGETQGGCNQQEHRGGAQGERKEGFADQMKDKIPGGGGGGHKGETQGGCNQQEHRGGAQGERKEGFVGQMKDKIPGGGGGGVGGKGETQGGCNQQEHRG 120 HSP 2 Score: 53.1434 bits (126), Expect = 1.759e-7 Identity = 34/92 (36.96%), Postives = 46/92 (50.00%), Query Frame = -1 Query: 351 GRRGRYKPDQLQSECNPGAEG-RVEGLWNRLKNKIPGGHGGSAD---QQQSECKPDQRKEGG------GIMDKVKDKIPGVHGGGADQQRGE 596 G +G + Q E GA+G R EG ++K+KIPGG GG + Q C + + G G + ++KDKIPG GGG RGE Sbjct: 61 GHKGETQGGCNQQEHRGGAQGERKEGFVGQMKDKIPGGGGGGVGGKGETQGGCNQQEHRGGAQGERKEGFVGQMKDKIPGGGGGGVGGVRGE 152
BLAST of DW043093 vs. TrEMBL
Match: Q68YT3|Q68YT3_VACCO (14 kDa dehydrin OS=Vaccinium corymbosum GN=bbdhn6 PE=4 SV=1) HSP 1 Score: 159.458 bits (402), Expect = 2.177e-37 Identity = 74/87 (85.06%), Postives = 81/87 (93.10%), Query Frame = -1 Query: 324 RYKPDQLQSECNPGAEGRVEGLWNRLKNKIPGGHGGSADQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD 584 +YKPDQLQSECNP + + GL +++K+KIPGGHGGSADQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD Sbjct: 16 QYKPDQLQSECNP-EQKKGGGLMDKVKDKIPGGHGGSADQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD 101
BLAST of DW043093 vs. TrEMBL
Match: O22623|O22623_VACCO (Dehydrin 1 OS=Vaccinium corymbosum GN=bbdhn1 PE=2 SV=1) HSP 1 Score: 92.4337 bits (228), Expect = 3.269e-17 Identity = 52/107 (48.60%), Postives = 61/107 (57.01%), Query Frame = -1 Query: 324 GRYKPDQLQSECNPGAEGRVEGLWNRLKNKIPGGHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD 587 G Y+ DQ E GL +++K+KIPGG+GGSA DQQ+ E K DQRKEGGG+MDKVKD I G GGGAD+ RGE K DQ RGD Sbjct: 208 GGYRQDQQHGEYKQDQRKEGGGLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQYRGD 314 HSP 2 Score: 73.9442 bits (180), Expect = 1.203e-11 Identity = 52/132 (39.39%), Postives = 58/132 (43.94%), Query Frame = -1 Query: 330 GRYKPDQLQSECNPGAEGRVEGLWNRLKNKIPGGHGGSA---------------------------DQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGA-------------------DQQRGECKPDQRR 587 G YK DQ GL ++K+KI GG GGSA DQQ E K DQRKEGGG+MDKVKDKIPG +GG A DQQRGE K DQR+ Sbjct: 147 GGYKQDQQLGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQLGGYRQDQQHGEYKQDQRKEGGGLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRK 278 HSP 3 Score: 63.929 bits (154), Expect = 1.245e-8 Identity = 47/114 (41.23%), Postives = 58/114 (50.88%), Query Frame = -1 Query: 327 GRYKPDQLQSEC----NPGA---EGRVEG--LWNRLKNKIPGGHGGSADQQQSECKPDQ------------------RKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRG 587 G+Y+ DQ SE PG + R EG L +++K+KI GG GSADQ Q K DQ KEGGG++ KVKDKI G GG ADQ +G DQ+ G Sbjct: 86 GKYRHDQQHSEYVQDQQPGGYRQDQRKEGGGLMDKVKDKIHGGGVGSADQHQDGYKQDQLHGGYKQDQQLGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLG 199 HSP 4 Score: 59.6918 bits (143), Expect = 2.348e-7 Identity = 45/112 (40.18%), Postives = 49/112 (43.75%), Query Frame = -1 Query: 327 KPDQLQSECNPGAEGRVEGLWNRLKNKIPGG--------------HGGSA-----DQQQSEC---------KPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRG 578 KP Q Q E GL LK+KI GG HG DQQ SE + DQRKEGGG+MDKVKDKI G G ADQ + K DQ G Sbjct: 36 KPGQHQGESRQDQRKEGGGLMGELKDKIHGGGVGTDGGGVGSVDPHGHQGGKYRHDQQHSEYVQDQQPGGYRQDQRKEGGGLMDKVKDKIHGGGVGSADQHQDGYKQDQLHG 147
BLAST of DW043093 vs. TrEMBL
Match: Q9M5W7|Q9M5W7_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.242e-16 Identity = 54/109 (49.54%), Postives = 64/109 (58.72%), Query Frame = -1 Query: 324 GRYKPDQLQSECNPGAEGRVEGLW--NRLKNKIPGGHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD 587 G Y+ DQ E + R EG W +++K+KIPGG+GGSA DQQ+ E K DQRKEGGG+MDKVKD I G GGGAD+ RGE K DQ RGD Sbjct: 102 GGYRQDQQHGEYKQ--DQRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQYRGD 208 HSP 2 Score: 67.781 bits (164), Expect = 8.622e-10 Identity = 46/111 (41.44%), Postives = 52/111 (46.85%), Query Frame = -1 Query: 330 GLWNRLKNKIPGGHGGSA---------------------------DQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGA-------------------DQQRGECKPDQRR 524 GL ++K+KI GG GGSA DQQ E K DQRKEGG +MDKVKDKIPG +GG A DQQRGE K DQR+ Sbjct: 62 GLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQLGGYRQDQQHGEYKQDQRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRK 172
BLAST of DW043093 vs. TrEMBL
Match: Q9M5W5|Q9M5W5_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 1.242e-16 Identity = 54/109 (49.54%), Postives = 64/109 (58.72%), Query Frame = -1 Query: 324 GRYKPDQLQSECNPGAEGRVEGLW--NRLKNKIPGGHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD 587 G Y+ DQ E + R EG W +++K+KIPGG+GGSA DQQ+ E K DQRKEGGG+MDKVKD I G GGGAD+ RGE K DQ RGD Sbjct: 214 GGYRQDQQHGEYKQ--DQRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQYRGD 320 HSP 2 Score: 70.8626 bits (172), Expect = 1.018e-10 Identity = 55/151 (36.42%), Postives = 66/151 (43.71%), Query Frame = -1 Query: 330 RGRYKPDQL----QSECNPGAEGRVE--------------GLWNRLKNKIPGGHGGSA---------------------------DQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGA-------------------DQQRGECKPDQRR 590 +G YK DQL + + PG G+ + GL ++K+KI GG GGSA DQQ E K DQRKEGG +MDKVKDKIPG +GG A DQQRGE K DQR+ Sbjct: 134 QGGYKQDQLLGGYRQDQQPGGYGQDQQPGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQLGGYRQDQQHGEYKQDQRKEGGWLMDKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRK 284
BLAST of DW043093 vs. TrEMBL
Match: Q9M5W8|Q9M5W8_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1) HSP 1 Score: 88.5817 bits (218), Expect = 4.720e-16 Identity = 53/107 (49.53%), Postives = 61/107 (57.01%), Query Frame = -1 Query: 324 GRYKPDQLQSECNPGAEGRVEGLWNRLKNKIPGGHGGSA-------------------DQQQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD 587 G YK DQ EGL +++K+KIPGG+GGSA DQQ+ E K DQRKEGGG+MDKVKD I G GGGAD+ RGE K DQ RGD Sbjct: 27 GGYKQDQQLGGHRQDQHN--EGLADKVKDKIPGGNGGSAADQHQGVYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQYRGD 131
BLAST of DW043093 vs. TrEMBL
Match: Q9M5W6|Q9M5W6_VACCO (Dehydrin (Fragment) OS=Vaccinium corymbosum PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 3.383e-14 Identity = 54/121 (44.63%), Postives = 63/121 (52.07%), Query Frame = -1 Query: 324 RGRYKPDQLQSECNPGAEGRVE--------------GLWNRLKNKIPGGHGGSADQ------------------QQSECKPDQRKEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRGD 590 +G YK DQ PG G+ + GL ++K+KI GG GGSADQ Q+ E K DQRKEGGG+MDKVKD I G GGGAD+ RGE K DQ RGD Sbjct: 103 QGGYKQDQ-----QPGGYGQDQQPGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLGGYRQDQQRGEYKQDQRKEGGGLMDKVKDTIHGGAGGGADKHRGEYKQDQYRGD 218 HSP 2 Score: 63.1586 bits (152), Expect = 2.124e-8 Identity = 43/107 (40.19%), Postives = 54/107 (50.47%), Query Frame = -1 Query: 327 RRGRYKPDQLQSECNPGAEGRVEGLWNRLKNKIPGGHGGSADQQQSECKPDQR------------------KEGGGIMDKVKDKIPGVHGGGADQQRGECKPDQRRG 593 +RG Y+ DQ EGL +++K+KI GG GSADQ Q K DQ+ KEGGG++ KVKDKI G GG ADQ +G DQ+ G Sbjct: 70 QRGGYRQDQHN-----------EGLADKVKDKIHGGGVGSADQHQGGYKQDQQPGGYGQDQQPGGYRQDQHKEGGGLIYKVKDKIHGGDGGSADQHQGIYGQDQQLG 165
BLAST of DW043093 vs. TrEMBL
Match: Q9AR75|Q9AR75_PISVE (Dehydrin OS=Pistacia vera GN=COR PE=2 SV=1) HSP 1 Score: 66.6254 bits (161), Expect = 1.921e-9 Identity = 34/95 (35.79%), Postives = 52/95 (54.74%), Query Frame = -1 Query: 339 RNSLFEGRRGRYKPDQLQSECNPGAEGRVEGLWNRLKNKIPGGHGGSADQQQSECKPDQRKEGGGIMDKVKDKIPG---VHGGGADQQRGECKPD 614 + L++G +K +Q C P EG+ ++KNK+PG G QQ CKP+ + G+++K+KDK+PG HG G Q RGE +P+ Sbjct: 23 QKGLYQGEA--HKVEQHHGVCKPEHGEHKEGMVQKIKNKVPG-QGDGVKQQHGVCKPEHGEHKEGLVEKIKDKVPGQGDQHGHGMQQHRGEYRPE 114 HSP 2 Score: 57.7658 bits (138), Expect = 8.922e-7 Identity = 31/90 (34.44%), Postives = 49/90 (54.44%), Query Frame = -1 Query: 339 RGRYKPDQLQSECNPGAEGRVEGLWNRLKNKIPGG---HGGSADQQQSECKPDQRKEGGGIMDKVKDKIPG---VHGGGADQQRGECKPD 590 RG Y+P+ + + EGL ++K+K+PG HG Q E +P+ + G+++K+KDK+PG HG G Q RGE +P+ Sbjct: 108 RGEYRPEYGEHK---------EGLVEKIKDKLPGQGDQHGQGVQQHHGEYRPEYGEHKEGLVEKIKDKLPGQGDQHGQGVQQHRGENRPE 188 The following BLAST results are available for this feature:
BLAST of DW043093 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of DW043093 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 7
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DW043093 ID=DW043093; Name=DW043093; organism=Vaccinium corymbosum; type=EST; length=665bpback to top |