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EST Overview
Name | DW043185 |
Unique Name | DW043185 |
Type | EST |
Organism | Vaccinium corymbosum (northern highbush blueberry) |
Sequence length | 520 |
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
IPR000347 | Plant metallothionein, family 15 | PFAM | PF01439 | Metallothio_2 | coord: 2..59 score: 2.3 |
None | No IPR available | SEG | seg | seg | coord: 4..25 score |
None | No IPR available | SEG | seg | seg | coord: 11..28 score: NAcoord: 45..65 score |
None | No IPR available | SEG | seg | seg | coord: 2..24 score |
None | No IPR available | SEG | seg | seg | coord: 11..28 score: NAcoord: 44..55 score |
None | No IPR available | SEG | seg | seg | coord: 38..56 score: NAcoord: 63..84 score |
Properties
Property Name | Value |
Singlet in analysis | Vaccinium corymbosum unigene v1 |
Sequences
The
following sequences are available for this feature:
EST sequence >DW043185 ID=DW043185; Name=DW043185; organism=Vaccinium corymbosum; type=EST; length=520bp AGCGTGGTTCGCGGCCGAGGTACGCGGGGATTCATCACAGCTTTCTTCTT CGTCTTCATCGATCGCTTCGGAAATCCCAATCTCTTTTTTTCGTCTCTCT CATCAACAACTTTCTCTCTCTAGAAAATGTCTTGCTGCGGAGGAAACTGT GGCTGCGGAGCTGGCTGCAAGTGCGGCAACGGCTGCGGAGGATGCAAGAT GTATCCTGACATGAGCTTCTCGGAGCAGACTTCCACCGAGACCCCTTATT CGTCGGCGTCGCTCCTCAGACAGACATTCTTTGAGGGATCTCGAGATGGG AGTGGGGGCCAGAAGAACGGCCTGCCAAGTGCGGAGCCCAACTGCCCAAT GCCGACCCTTTGGCAACTGCCAAATGGAAACCCATCATTCGCATTCTAAC CCACACAAGCCAACAAATTTGGGTTCCTTTAATTCTCTCATTCAAGAACA AATCAAATCCCTAAGATATGTTTTAACTAATTCTTTCTGGTGTTTTTGTT GTTCTGGTTGGGTAATCGGG back to top
Annotated Terms
The
following terms have been associated with
this EST:
Vocabulary: Molecular Function
Term | Definition |
GO:0046872 | metal ion binding |
Vocabulary: INTERPRO
Term | Definition |
IPR000347 | Metalthion_15p |
noIPR | unintegrated |
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