DW043372

EST Overview
NameDW043372
Unique NameDW043372
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length688
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of DW043372 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s02900.1 ()

HSP 1 Score: 58.5362 bits (140), Expect = 4.406e-9
Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = -2
Query:  358 DSVGNDTEVTDQNFIDEDSEGEKANHVHEAKRRKILVAPTSSNDQVVPFGKRPLTQIV 531
            D V ++TE++DQNF+DED +GEKA+    +K+ K L    S +DQVVP GK P+ + V
Sbjct:  188 DLVDSNTEMSDQNFVDEDIKGEKASSSLSSKKMKTLKTDASGSDQVVPHGKPPVAEEV 245          
BLAST of DW043372 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s12750.1 ()

HSP 1 Score: 56.225 bits (134), Expect = 2.187e-8
Identity = 28/61 (45.90%), Postives = 38/61 (62.30%), Query Frame = -2
Query:  358 CRSDSVGNDTEVTDQNFIDEDSEGEKANHVHEAKRRKILVAPTSSNDQVVPFGKRPLTQIV 540
            C  D V ++TE++ QNF+DED E E A+    +KR K L    SS+DQVVP  K P+ + V
Sbjct:  189 CHRDFVESNTEMSGQNFVDEDIESESASSSFSSKRLKTLKTDPSSSDQVVPHSKTPVEEEV 249          
BLAST of DW043372 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s10420.1 ()

HSP 1 Score: 55.0694 bits (131), Expect = 4.872e-8
Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = -2
Query:  385 LCRSDSVGNDTEVTDQNFIDEDSEGEKANHVHEAKRRKILVAPTSSNDQVVPF 543
            LC  + +G+  EV+DQNF++ED EGE  N VH  KR +   A  SSNDQ VPF
Sbjct:  177 LCYQNYIGSTIEVSDQNFVEED-EGEMLNCVHMVKRLRTSGAEASSNDQAVPF 228          
BLAST of DW043372 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s02900.2 ()

HSP 1 Score: 52.373 bits (124), Expect = 3.158e-7
Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = -2
Query:  358 TDQNFIDEDSEGEKANHVHEAKRRKILVAPTSSNDQVVPFGKRPLTQIV 504
            TDQNF+DED +GEKA+    +K+ K L    S +DQVVP GK P+ + V
Sbjct:  194 TDQNFVDEDIKGEKASSSLSSKKMKTLKTDASGSDQVVPHGKPPVAEEV 242          
BLAST of DW043372 vs. P. persica 1.0 peptide
Match: ppa010429m ()

HSP 1 Score: 61.2326 bits (147), Expect = 4.852e-10
Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = -2
Query:  379 SQFPLCRSDSVGNDTEVTDQNFIDEDSEGEKANHVHEAKRRKILVAPTSSNDQVVPFGK 555
            S+  LC  D VG +TEV+DQNF+DED + EK     +AKR K L+   ++NDQVVP  K
Sbjct:  188 SRSQLCHQDMVGGNTEVSDQNFVDEDIKEEKTLGSCDAKRMKALILDVANNDQVVPLRK 246          
BLAST of DW043372 vs. TrEMBL
Match: B9MVQ9|B9MVQ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_591950 PE=4 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 5.701e-7
Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = -2
Query:  358 DSVGNDTEVTDQNFIDEDSEGEKANHVHEAKRRKILVAPTSSNDQVVPFGKRPLTQIV 531
            D V ++TE++DQNF+DED +GEKA+    +K+ K L    S +DQVVP GK P+ + V
Sbjct:  188 DLVDSNTEMSDQNFVDEDIKGEKASSSLSSKKMKTLKTDASGSDQVVPHGKPPVAEEV 245          
BLAST of DW043372 vs. Vitis vinifera peptide
Match: GSVIVT01009490001 (assembled CDS)

HSP 1 Score: 58.151 bits (139), Expect = 3.508e-9
Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = -2
Query:  367 QFP-----LCRSDSVGNDTEVTDQNFIDEDSEGEKANHVHEAKRRKILVAPTSSNDQVVPFGKRPLT 552
            QFP     L + DS+  +TEV+DQNF+D+D EG + N +  AKR K +V  T  NDQVVP  +  +T
Sbjct:  178 QFPMYHCHLRQRDSLSTNTEVSDQNFLDDDVEGGRENSLVSAKRMKTIVVDTCVNDQVVPSHRHTVT 244          
The following BLAST results are available for this feature:
BLAST of DW043372 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
POPTR_0014s02900.14.406e-948.28[more]
POPTR_0002s12750.12.187e-845.90[more]
POPTR_0009s10420.14.872e-852.83[more]
POPTR_0014s02900.23.158e-751.02[more]
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BLAST of DW043372 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa010429m4.852e-1050.85[more]
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BLAST of DW043372 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
B9MVQ9|B9MVQ9_POPTR5.701e-748.28Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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BLAST of DW043372 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010094900013.508e-946.27assembled CDS[more]
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Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043372 ID=DW043372; Name=DW043372; organism=Vaccinium corymbosum; type=EST; length=688bp
GAATTAAGGATTTTCCATATTGCAACCTTACGCATTGAGATGGAATAATC
ATACATACTCCGTTAAACTTCACATAATCTTTACGGCAATTCAAGGGGGC
AAAAAAAACAATTGAAGGCCCTAAAACAAAAAAAATGCAACATGCTAGTC
TAACCTCCATCCCAGCTGCAATACAAAACCGCCATGCTCCTCGAAACCTA
CTCTACATGAGACCAGGGCGCCTCTCTCATGCGAAGCATTTCTGAATAAC
CTTACTAGTCGGCAACTAATAGGGCTCGGGAATCATATCTTGGTTTCCTG
GGTTAGATCACCACTGCTTTAGGACCTCTTTCTTCCGGACACAGAAGGAT
TCTTGCGGACAATTTGGGTTAAAGGACGTTTGCCAAAAGGAACAACCTGA
TCATTGCTTGAGGTGGGAGCAACCAAAATTTTCCTCCTTTTAGCTTCGTG
TACATGGTTTGCCTTCTCACCTTCACTATCTTCATCGATAAAGTTCTGGT
CTGTGACCTCTGTATCGTTTCCAACTGAATCACTGCGGCACAAAGGAAAC
TGGCTTCATATTGGCAGTTTAAGTCAGCAGGAGCCCAATGCCTATTTTTC
TGAAATGGGTTCGAAGTTCCCAGAACCTCCCAAATTGAATATTTCTTTTC
TTGNTAGAATCACAAGAATAATTACATTTCTGGTTCTC
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