DW043372
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DW043372 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s02900.1 () HSP 1 Score: 58.5362 bits (140), Expect = 4.406e-9 Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = -2 Query: 358 DSVGNDTEVTDQNFIDEDSEGEKANHVHEAKRRKILVAPTSSNDQVVPFGKRPLTQIV 531 D V ++TE++DQNF+DED +GEKA+ +K+ K L S +DQVVP GK P+ + V Sbjct: 188 DLVDSNTEMSDQNFVDEDIKGEKASSSLSSKKMKTLKTDASGSDQVVPHGKPPVAEEV 245
BLAST of DW043372 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0002s12750.1 () HSP 1 Score: 56.225 bits (134), Expect = 2.187e-8 Identity = 28/61 (45.90%), Postives = 38/61 (62.30%), Query Frame = -2 Query: 358 CRSDSVGNDTEVTDQNFIDEDSEGEKANHVHEAKRRKILVAPTSSNDQVVPFGKRPLTQIV 540 C D V ++TE++ QNF+DED E E A+ +KR K L SS+DQVVP K P+ + V Sbjct: 189 CHRDFVESNTEMSGQNFVDEDIESESASSSFSSKRLKTLKTDPSSSDQVVPHSKTPVEEEV 249
BLAST of DW043372 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0009s10420.1 () HSP 1 Score: 55.0694 bits (131), Expect = 4.872e-8 Identity = 28/53 (52.83%), Postives = 35/53 (66.04%), Query Frame = -2 Query: 385 LCRSDSVGNDTEVTDQNFIDEDSEGEKANHVHEAKRRKILVAPTSSNDQVVPF 543 LC + +G+ EV+DQNF++ED EGE N VH KR + A SSNDQ VPF Sbjct: 177 LCYQNYIGSTIEVSDQNFVEED-EGEMLNCVHMVKRLRTSGAEASSNDQAVPF 228
BLAST of DW043372 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0014s02900.2 () HSP 1 Score: 52.373 bits (124), Expect = 3.158e-7 Identity = 25/49 (51.02%), Postives = 33/49 (67.35%), Query Frame = -2 Query: 358 TDQNFIDEDSEGEKANHVHEAKRRKILVAPTSSNDQVVPFGKRPLTQIV 504 TDQNF+DED +GEKA+ +K+ K L S +DQVVP GK P+ + V Sbjct: 194 TDQNFVDEDIKGEKASSSLSSKKMKTLKTDASGSDQVVPHGKPPVAEEV 242
BLAST of DW043372 vs. P. persica 1.0 peptide
Match: ppa010429m () HSP 1 Score: 61.2326 bits (147), Expect = 4.852e-10 Identity = 30/59 (50.85%), Postives = 39/59 (66.10%), Query Frame = -2 Query: 379 SQFPLCRSDSVGNDTEVTDQNFIDEDSEGEKANHVHEAKRRKILVAPTSSNDQVVPFGK 555 S+ LC D VG +TEV+DQNF+DED + EK +AKR K L+ ++NDQVVP K Sbjct: 188 SRSQLCHQDMVGGNTEVSDQNFVDEDIKEEKTLGSCDAKRMKALILDVANNDQVVPLRK 246
BLAST of DW043372 vs. TrEMBL
Match: B9MVQ9|B9MVQ9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_591950 PE=4 SV=1) HSP 1 Score: 58.5362 bits (140), Expect = 5.701e-7 Identity = 28/58 (48.28%), Postives = 40/58 (68.97%), Query Frame = -2 Query: 358 DSVGNDTEVTDQNFIDEDSEGEKANHVHEAKRRKILVAPTSSNDQVVPFGKRPLTQIV 531 D V ++TE++DQNF+DED +GEKA+ +K+ K L S +DQVVP GK P+ + V Sbjct: 188 DLVDSNTEMSDQNFVDEDIKGEKASSSLSSKKMKTLKTDASGSDQVVPHGKPPVAEEV 245
BLAST of DW043372 vs. Vitis vinifera peptide
Match: GSVIVT01009490001 (assembled CDS) HSP 1 Score: 58.151 bits (139), Expect = 3.508e-9 Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = -2 Query: 367 QFP-----LCRSDSVGNDTEVTDQNFIDEDSEGEKANHVHEAKRRKILVAPTSSNDQVVPFGKRPLT 552 QFP L + DS+ +TEV+DQNF+D+D EG + N + AKR K +V T NDQVVP + +T Sbjct: 178 QFPMYHCHLRQRDSLSTNTEVSDQNFLDDDVEGGRENSLVSAKRMKTIVVDTCVNDQVVPSHRHTVT 244 The following BLAST results are available for this feature:
BLAST of DW043372 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 4
BLAST of DW043372 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of DW043372 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 1
BLAST of DW043372 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DW043372 ID=DW043372; Name=DW043372; organism=Vaccinium corymbosum; type=EST; length=688bpback to top |