DW043400

EST Overview
NameDW043400
Unique NameDW043400
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length682
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of DW043400 vs. DB:swissprot:display
Match: RPA49_SCHPO (DNA-directed RNA polymerase I subunit rpa49 OS=Schizosaccharomyces pombe GN=rpa49 PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 8.057e-11
Identity = 65/219 (29.68%), Postives = 102/219 (46.58%), Query Frame = -3
Query:   24 RNTPPHDSSATTPQMAYPLDKIILKGEWD--YLVDILEVLQDG--AELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQNSMEGFSSAKHHKI---PSILSQ---KFSTMFGGSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVR---------------EGNLYFATLPVPLVFPKPK 605
            R  PP +  A + + AY L+ II K E+   Y+  +LE   +   A+L   R++ FI  R  +L S+ +EV++KR A +L YI+ L  +       G       K+   P IL     K  T   G    +++  + D +I Y+LVL LI D + T+V  +  DL + + K    F  +GC+++                  N   A L +PL FPKP+
Sbjct:  203 RPIPPVNVGAESIEDAYKLEDIIPKEEFSAIYIKPLLENPDERNWAKLLPYRHSLFINERFQRLLSI-EEVDQKR-ARILYYISLLQAFLFSRRSVGNRETLRKKLADPPEILIDGLIKRFTQTTGIGSVQVSSREVDKIICYILVLCLIVDNYSTDVLTLANDLNVKTMKANELFRTVGCRIMAYTETQRMALGLNKTDAKNHKRAVLKIPLEFPKPR 419          
BLAST of DW043400 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s20580.1 ()

HSP 1 Score: 242.276 bits (617), Expect = 2.102e-64
Identity = 118/202 (58.42%), Postives = 155/202 (76.73%), Query Frame = -3
Query:   24 ESVVTHSSRNTPPHDSSATTPQMAYPLDKIILKGEWDYLVDILEVLQDGAELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQNSMEGFSSAKHHKIPSILSQKFSTMFGGSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVREGNLYFATLPVPLVFPKPK 629
            ES   HS+RN PP++SSA TPQ AYPLD IIL GEWD+L DI ++LQ G E+AS+ Y +F+CNR  KL  ++DEVEKKRL+C+ SYI HL+K+K+Q+SM+G +SA++H+ PSI+ QKF  MF   + RRL+ +K DLLISYVLVLTL AD FRT  +D++ DLRM+ A ++ H+ +LGCK+ RE N Y  TL VPL FP+PK
Sbjct:  266 ESTSGHSARNIPPYNSSAITPQEAYPLDGIILTGEWDFLEDIYKILQVGGEVASNAYPTFVCNRIQKLREIQDEVEKKRLSCIFSYITHLLKFKDQHSMDGAASARNHQFPSIIRQKFFEMF-KPETRRLSVDKIDLLISYVLVLTLYADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMEREKNKYLVTLSVPLEFPQPK 466          
BLAST of DW043400 vs. P. persica 1.0 peptide
Match: ppa006096m ()

HSP 1 Score: 229.565 bits (584), Expect = 1.007e-60
Identity = 112/200 (56.00%), Postives = 153/200 (76.50%), Query Frame = -3
Query:   30 ESVVTHSSRNTPPHDSSATTPQMAYPLDKIILKGEWDYLVDILEVLQDGAELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQNSMEGFSSAKHHKIPSILSQKFSTMFGGSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVREGNLYFATLPVPLVFPK 629
            ES  +  SR+ PP + SATTPQ AY LDKIIL GEWD L DI E  Q GAE++ D +  F+C+R HKL+ ++ + EK +L+C+ SYI HL+K+K+Q+SM+G SS++ H+IP++L  KFSTMF  ++ + L++EK +LLISYVLVLTL  D F T+++DI +DLRMS+  LR H+E+LGCKLVR+ N+ FATLPVPL FP+
Sbjct:  219 ESTESQISRHIPPFNESATTPQEAYSLDKIILTGEWDLLGDIYEHFQGGAEVSWDAFPRFVCHRIHKLQDIEVDEEKFKLSCIFSYITHLIKFKDQHSMDGISSSRTHRIPNLLFHKFSTMF-PTESKGLSNEKTNLLISYVLVLTLFVDEFETDLTDIAKDLRMSAIALRKHYENLGCKLVRKRNVMFATLPVPLQFPQ 417          
BLAST of DW043400 vs. TrEMBL
Match: D7TZX4|D7TZX4_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_2.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00016817001 PE=4 SV=1)

HSP 1 Score: 273.863 bits (699), Expect = 8.367e-72
Identity = 136/201 (67.66%), Postives = 161/201 (80.10%), Query Frame = -3
Query:   30 ESVVTHSSRNTPPHDSSATTPQMAYPLDKIILKGEWDYLVDILEVLQDGAELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQNSMEGFSSAKHHKIPSILSQKFSTMFG-GSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVREGNLYFATLPVPLVFPK 629
            ES   HS+RN PP+D +ATTPQ AY LDKII KGEWDYL+DIL++LQ G E+ S  Y+SF+CNR  KL+ L+DE EK  LAC+ SYINHL+KYK++NSM+  SSAKHHKIP IL+QKFS+MF   SD RRL +EK+DLLISYVLVLTL AD FRT+ SDI RDLRMS+ KLR HFEHLGCKLV +  +  ATLPVPL FP+
Sbjct:  185 ESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEVESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMDA-SSAKHHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKLRAHFEHLGCKLVSQNKVTMATLPVPLTFPR 384          
BLAST of DW043400 vs. TrEMBL
Match: B9N1A8|B9N1A8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_827585 PE=4 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.698e-62
Identity = 118/202 (58.42%), Postives = 155/202 (76.73%), Query Frame = -3
Query:   24 ESVVTHSSRNTPPHDSSATTPQMAYPLDKIILKGEWDYLVDILEVLQDGAELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQNSMEGFSSAKHHKIPSILSQKFSTMFGGSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVREGNLYFATLPVPLVFPKPK 629
            ES   HS+RN PP++SSA TPQ AYPLD IIL GEWD+L DI ++LQ G E+AS+ Y +F+CNR  KL  ++DEVEKKRL+C+ SYI HL+K+K+Q+SM+G +SA++H+ PSI+ QKF  MF   + RRL+ +K DLLISYVLVLTL AD FRT  +D++ DLRM+ A ++ H+ +LGCK+ RE N Y  TL VPL FP+PK
Sbjct:  266 ESTSGHSARNIPPYNSSAITPQEAYPLDGIILTGEWDFLEDIYKILQVGGEVASNAYPTFVCNRIQKLREIQDEVEKKRLSCIFSYITHLLKFKDQHSMDGAASARNHQFPSIIRQKFFEMF-KPETRRLSVDKIDLLISYVLVLTLYADDFRTFPADVSNDLRMNPATVKSHYRNLGCKMEREKNKYLVTLSVPLEFPQPK 466          
BLAST of DW043400 vs. TrEMBL
Match: B9S5U8|B9S5U8_RICCO (DNA-directed RNA polymerase I 49 kDa polypeptide, putative OS=Ricinus communis GN=RCOM_0654760 PE=4 SV=1)

HSP 1 Score: 226.483 bits (576), Expect = 1.532e-57
Identity = 115/199 (57.79%), Postives = 144/199 (72.36%), Query Frame = -3
Query:   33 ESVVTHSSRNTPPHDSSATTPQMAYPLDKIILKGEWDYLVDILEVLQDGAELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQNSMEGFSSAKHHKIPSILSQKFSTMFGGSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVREGNLYFATLPVPLVFP 629
            E    H +RN PPH++SATTPQ AYPL +IIL GEWDYL D+ E+LQ G   A + Y  F+ NR HKL  ++DEVE+K  + + SYI HL+K+K+ +SM+G SSAK+HK PSIL QKF  MF   + R+L  EK DLLISYVLVL+L AD FRT+ +DI +DLR+S   +R HFE+LGCK+V E  L  ATLPVPL FP
Sbjct:  275 EDTSAHVARNIPPHNTSATTPQEAYPLGRIILTGEWDYLEDLYEILQAGEGAAINAYPVFVRNRIHKLREIQDEVERKTYSRIFSYITHLLKFKDLHSMDGVSSAKNHKFPSILRQKFMGMF-TPESRKLPVEKIDLLISYVLVLSLYADDFRTDPTDIAKDLRVSRVMVRTHFENLGCKIVCENKLSLATLPVPLKFP 472          
BLAST of DW043400 vs. TrEMBL
Match: A2Q1X0|A2Q1X0_MEDTR (Putative uncharacterized protein (Fragment) OS=Medicago truncatula GN=MtrDRAFT_AC149130g57v2 PE=4 SV=1)

HSP 1 Score: 214.927 bits (546), Expect = 4.612e-54
Identity = 107/197 (54.31%), Postives = 143/197 (72.59%), Query Frame = -3
Query:   24 HSSRNTPPHDSSATTPQMAYPLDKIILKGEWDYLVDILEVLQDGAELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQNSMEGFSSAKHHKIPSILSQKFSTMFGGSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVREGNLYFATLPVPLVFPKPK 614
            H +R+ PP++SSATTPQ AY LDKIIL  EW+YL DI   LQ         Y SFI NR ++L+ ++D+ EKK+L+C+LS+IN+LVK+K+Q+SM+G SS+K  K+P  L  +F+TMF  ++ RRL  EK +LLISYVLVLTL +D FRT+  DI +DLRMS+  LRP FEHLGCK +    + +ATLP+PL F + K
Sbjct:   37 HVTRHIPPYNSSATTPQEAYVLDKIILAEEWNYLQDIYYSLQKEVAADFSLYPSFIRNRINRLKKIEDDSEKKKLSCILSFINYLVKFKDQHSMDGISSSKFEKLPYTLYHRFTTMFDVTESRRLPPEKMNLLISYVLVLTLFSDDFRTDYRDIVKDLRMSTLTLRPIFEHLGCKFISSQKVSYATLPIPLTFSQIK 233          
BLAST of DW043400 vs. TrEMBL
Match: B7FK61|B7FK61_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1)

HSP 1 Score: 213.001 bits (541), Expect = 1.753e-53
Identity = 106/197 (53.81%), Postives = 143/197 (72.59%), Query Frame = -3
Query:   24 HSSRNTPPHDSSATTPQMAYPLDKIILKGEWDYLVDILEVLQDGAELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQNSMEGFSSAKHHKIPSILSQKFSTMFGGSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVREGNLYFATLPVPLVFPKPK 614
            H +R+ PP++SSATTPQ AY LDKIIL  EW+YL DI   LQ         Y SFI NR ++L+ ++D+ EKK+ +C+LS+IN+LVK+K+Q+SM+G SS+K  K+P  L  +F+TMF  ++ RRL  EK +LLISYVLVLTL +D FRT+  DI +DLRM++  LRP FEHLGCKL+    + +ATLP+PL F + K
Sbjct:  222 HVTRHIPPYNSSATTPQEAYVLDKIILAEEWNYLQDIYYSLQKEVAADFSLYPSFIRNRINRLKKIEDDSEKKKHSCILSFINYLVKFKDQHSMDGISSSKFEKLPYTLHHRFTTMFDVTESRRLPPEKMNLLISYVLVLTLFSDDFRTDYRDIAKDLRMTTLTLRPIFEHLGCKLISSQKVSYATLPIPLTFSQIK 418          
BLAST of DW043400 vs. TrEMBL
Match: D7L2A3|D7L2A3_ARALY (DNA binding protein OS=Arabidopsis lyrata subsp. lyrata GN=ARALYDRAFT_897650 PE=4 SV=1)

HSP 1 Score: 209.149 bits (531), Expect = 2.531e-52
Identity = 99/200 (49.50%), Postives = 144/200 (72.00%), Query Frame = -3
Query:   30 ESVVTHSSRNTPPHDSSATTPQMAYPLDKIILKGEWDYLVDILEVLQDGAELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQNSMEGFSSAKHHKIPSILSQKFSTMFGGSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVREGNLYFATLPVPLVFPK 629
            ES  +  +RN PP+D++ATT + AYPL+KII KGEW +L DI  +L+ G E A+D Y  F+ NR  KL  +KD+++K+ ++  L+ + HLVK+K++NSM GF SAK+HK+P I  +KF +MF  S+  R+  +K +LLISYVLVL+L  D F+T+  DI +DLR+S+ +LR HF+ LGCK V++ + + ATLP PL FP+
Sbjct:  235 ESTSSTVARNIPPYDAAATTAKEAYPLEKIIEKGEWSFLEDIYWLLEQGTEAATDAYPVFVRNRLFKLRDIKDDMKKQTVSGALTLLTHLVKFKDRNSMNGFDSAKNHKMPDIFRRKFQSMFKDSESERIPVDKANLLISYVLVLSLHVDNFKTDPEDIAKDLRISTVELRKHFQQLGCKFVKQNSTWVATLPTPLNFPE 434          
BLAST of DW043400 vs. TrEMBL
Match: Q9LVK6|Q9LVK6_ARATH (Genomic DNA, chromosome 3, P1 clone: MDC16 OS=Arabidopsis thaliana GN=At3g13940 PE=2 SV=1)

HSP 1 Score: 191.045 bits (484), Expect = 7.132e-47
Identity = 91/193 (47.15%), Postives = 135/193 (69.95%), Query Frame = -3
Query:   30 SRNTPPHDSSATTPQMAYPLDKIILKGEWDYLVDILEVLQDGAELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQNSMEGFSSAKHHKIPSILSQKFSTMFGGSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVREGNLYFATLPVPLVFPK 608
            +RN PP++++ATT   AYPL+KII KG+W +L DI  +LQ   E A++ Y  F+ NR ++L  +KD+++K+ +    + + HLVK+K++NSM G+ SAK HK+P I  QKF++MF  S+  R+  +K +LLISYVLVL+L  D F T+  DI +DLR+S+ +LR HF  LGCK +++ +   ATLP PL FP+
Sbjct:  241 ARNIPPYNTAATTANEAYPLEKIIEKGDWSFLEDIYWLLQQETEAATEAYPVFVRNRLYRLRDIKDDMKKQTVCGAATLLTHLVKFKDRNSMNGYDSAKDHKMPDIFRQKFNSMFKDSESDRIPVDKINLLISYVLVLSLHVDNFMTDPEDIAKDLRISTVELRKHFLQLGCKFLKQNSTTVATLPTPLNFPE 433          
BLAST of DW043400 vs. TrEMBL
Match: B8A3S6|B8A3S6_MAIZE (Putative uncharacterized protein OS=Zea mays PE=2 SV=1)

HSP 1 Score: 138.658 bits (348), Expect = 4.201e-31
Identity = 83/203 (40.89%), Postives = 120/203 (59.11%), Query Frame = -3
Query:   30 RNTPPHDSSATTPQMAYPLDKIILKGEWDYLVDILEVLQDGAELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQN---SMEGFSSAKHHKI------PSILSQKFSTMFGGSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVREG--NLYFATLPVPLVFPK 605
            RN PP+D +A T + AY LD+II K   ++L++I+   + G E++S  Y SF+  R HKL+ L+ E +KKR A +LSYI HL+    +N   S   +     ++I      P  + ++   MF       +  EK++LL +Y+LVLTL AD FR+N SDI  DL+M+   L+P+++ LGCK V EG     F TLP PL FPK
Sbjct:   52 RNIPPYDPTADTSENAYLLDEIIPKSMREHLLEIVRHFESG-EISSKGYGSFVSKRVHKLKELQGE-DKKRFAWILSYIQHLLSLLARNGSMSNRKWKGRNENQISHGPATPQAVYRRLLFMFTEPGSSVMPTEKKELLTNYILVLTLFADDFRSNPSDICEDLKMTRQNLKPYYDQLGCKSVTEGAFKSTFMTLPAPLKFPK 252          
BLAST of DW043400 vs. TrEMBL
Match: Q2R177|Q2R177_ORYSJ (Expressed protein OS=Oryza sativa subsp. japonica GN=Os11g0615100 PE=2 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.358e-31
Identity = 84/204 (41.18%), Postives = 120/204 (58.82%), Query Frame = -3
Query:   30 RNTPPHDSSATTPQMAYPLDKIILKGEWDYLVDILEVLQDGAELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQNSMEGFSSAKHHK----------IPSILSQKFSTMFGGSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVREGNLYFA--TLPVPLVFPK 605
            RN PP+D +A T + AY  D+II K    +LVDI+   + G E++S  Y SF+ NR +KL+ L+ E +K+RLA +LSYI HL+    +NS    S +K H+          IP  + +K   MF       L+ EK +LLI+Y+LVLTL AD FR++  DI  DL+M+   ++P+++ LGCK    G    +  TLP PL FPK
Sbjct:  277 RNIPPYDPAADTSERAYLFDEIIPKSIRPHLVDIIGHFESG-EISSKGYGSFVSNRVNKLQELQGE-DKERLAWILSYITHLLSLLARNS----SMSKRHRKENQATSGPVIPQYVYRKMVLMFTEPGSSALSTEKHELLINYILVLTLYADDFRSDPKDICEDLKMTRQMIKPYYDQLGCKSSSAGAFKSSVMTLPAPLKFPK 474          
BLAST of DW043400 vs. TrEMBL
Match: B9G8J6|B9G8J6_ORYSJ (Putative uncharacterized protein OS=Oryza sativa subsp. japonica GN=OsJ_34625 PE=4 SV=1)

HSP 1 Score: 137.502 bits (345), Expect = 9.358e-31
Identity = 84/204 (41.18%), Postives = 120/204 (58.82%), Query Frame = -3
Query:   30 RNTPPHDSSATTPQMAYPLDKIILKGEWDYLVDILEVLQDGAELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQNSMEGFSSAKHHK----------IPSILSQKFSTMFGGSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVREGNLYFA--TLPVPLVFPK 605
            RN PP+D +A T + AY  D+II K    +LVDI+   + G E++S  Y SF+ NR +KL+ L+ E +K+RLA +LSYI HL+    +NS    S +K H+          IP  + +K   MF       L+ EK +LLI+Y+LVLTL AD FR++  DI  DL+M+   ++P+++ LGCK    G    +  TLP PL FPK
Sbjct:  255 RNIPPYDPAADTSERAYLFDEIIPKSIRPHLVDIIGHFESG-EISSKGYGSFVSNRVNKLQELQGE-DKERLAWILSYITHLLSLLARNS----SMSKRHRKENQATSGPVIPQYVYRKMVLMFTEPGSSALSTEKHELLINYILVLTLYADDFRSDPKDICEDLKMTRQMIKPYYDQLGCKSSSAGAFKSSVMTLPAPLKFPK 452          
BLAST of DW043400 vs. Vitis vinifera peptide
Match: GSVIVT01016817001 (assembled CDS)

HSP 1 Score: 273.863 bits (699), Expect = 3.977e-74
Identity = 136/201 (67.66%), Postives = 161/201 (80.10%), Query Frame = -3
Query:   30 ESVVTHSSRNTPPHDSSATTPQMAYPLDKIILKGEWDYLVDILEVLQDGAELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQNSMEGFSSAKHHKIPSILSQKFSTMFG-GSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVREGNLYFATLPVPLVFPK 629
            ES   HS+RN PP+D +ATTPQ AY LDKII KGEWDYL+DIL++LQ G E+ S  Y+SF+CNR  KL+ L+DE EK  LAC+ SYINHL+KYK++NSM+  SSAKHHKIP IL+QKFS+MF   SD RRL +EK+DLLISYVLVLTL AD FRT+ SDI RDLRMS+ KLR HFEHLGCKLV +  +  ATLPVPL FP+
Sbjct:  185 ESTSAHSARNIPPYDDTATTPQEAYRLDKIIFKGEWDYLLDILDLLQAGVEVESSAYSSFVCNRIQKLKELEDEGEKTTLACIFSYINHLLKYKDRNSMDA-SSAKHHKIPGILNQKFSSMFALDSDSRRLTEEKKDLLISYVLVLTLYADEFRTDPSDIARDLRMSAVKLRAHFEHLGCKLVSQNKVTMATLPVPLTFPR 384          
BLAST of DW043400 vs. TAIR peptide
Match: AT3G13940.1 (| Symbols: | DNA binding;DNA-directed RNA polymerases | chr3:4600647-4602412 REVERSE LENGTH=442)

HSP 1 Score: 191.045 bits (484), Expect = 4.892e-49
Identity = 91/193 (47.15%), Postives = 135/193 (69.95%), Query Frame = -3
Query:   30 SRNTPPHDSSATTPQMAYPLDKIILKGEWDYLVDILEVLQDGAELASDRYTSFICNRCHKLESLKDEVEKKRLACVLSYINHLVKYKEQNSMEGFSSAKHHKIPSILSQKFSTMFGGSDKRRLADEKRDLLISYVLVLTLIADGFRTNVSDITRDLRMSSAKLRPHFEHLGCKLVREGNLYFATLPVPLVFPK 608
            +RN PP++++ATT   AYPL+KII KG+W +L DI  +LQ   E A++ Y  F+ NR ++L  +KD+++K+ +    + + HLVK+K++NSM G+ SAK HK+P I  QKF++MF  S+  R+  +K +LLISYVLVL+L  D F T+  DI +DLR+S+ +LR HF  LGCK +++ +   ATLP PL FP+
Sbjct:  241 ARNIPPYNTAATTANEAYPLEKIIEKGDWSFLEDIYWLLQQETEAATEAYPVFVRNRLYRLRDIKDDMKKQTVCGAATLLTHLVKFKDRNSMNGYDSAKDHKMPDIFRQKFNSMFKDSESDRIPVDKINLLISYVLVLSLHVDNFMTDPEDIAKDLRISTVELRKHFLQLGCKFLKQNSTTVATLPTPLNFPE 433          
The following BLAST results are available for this feature:
BLAST of DW043400 vs. DB:swissprot:display
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Swissprot)
Total hits: 1
Match NameE-valueIdentityDescription
RPA49_SCHPO8.057e-1129.68DNA-directed RNA polymerase I subunit rpa49 OS=Sch... [more]
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BLAST of DW043400 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0001s20580.12.102e-6458.42[more]
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BLAST of DW043400 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa006096m1.007e-6056.00[more]
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BLAST of DW043400 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 10
Match NameE-valueIdentityDescription
D7TZX4|D7TZX4_VITVI8.367e-7267.66Whole genome shotgun sequence of line PN40024, sca... [more]
B9N1A8|B9N1A8_POPTR2.698e-6258.42Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
B9S5U8|B9S5U8_RICCO1.532e-5757.79DNA-directed RNA polymerase I 49 kDa polypeptide, ... [more]
A2Q1X0|A2Q1X0_MEDTR4.612e-5454.31Putative uncharacterized protein (Fragment) OS=Med... [more]
B7FK61|B7FK61_MEDTR1.753e-5353.81Putative uncharacterized protein OS=Medicago trunc... [more]
D7L2A3|D7L2A3_ARALY2.531e-5249.50DNA binding protein OS=Arabidopsis lyrata subsp. l... [more]
Q9LVK6|Q9LVK6_ARATH7.132e-4747.15Genomic DNA, chromosome 3, P1 clone: MDC16 OS=Arab... [more]
B8A3S6|B8A3S6_MAIZE4.201e-3140.89Putative uncharacterized protein OS=Zea mays PE=2 ... [more]
Q2R177|Q2R177_ORYSJ9.358e-3141.18Expressed protein OS=Oryza sativa subsp. japonica ... [more]
B9G8J6|B9G8J6_ORYSJ9.358e-3141.18Putative uncharacterized protein OS=Oryza sativa s... [more]
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BLAST of DW043400 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010168170013.977e-7467.66assembled CDS[more]
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BLAST of DW043400 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
AT3G13940.14.892e-4947.15| Symbols: | DNA binding;DNA-directed RNA polymer... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009668RNA polymerase I associated factor, A49-likePFAMPF06870RNA_pol_I_A49coord: 9..206
score: 4.9

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043400 ID=DW043400; Name=DW043400; organism=Vaccinium corymbosum; type=EST; length=682bp
TCGAGCGGCCGCCCGGGCAGGTACTTCGGCTTTGGAAACACAAGTGGCAC
AGGAAGTGTAGCAAAATACAAATTGCCCTCCCGCACAAGCTTGCAACCAA
GATGTTCAAAATGTGGTCTAAGCTTAGCTGAACTCATTCTCAAGTCCCTA
GTAATATCTGACACATTGGTTCTGAAGCCATCGGCAATCAGAGTAAGAAC
CAAGACATAGCTAATCAGAAGATCCCTCTTCTCATCCGCAAGCCTTCTTT
TATCTGAACCGCCAAACATGGTTGAAAACTTTTGAGATAAGATACTTGGG
ATTTTATGATGCTTCGCAGAGGAGAAACCTTCCATGGAGTTTTGCTCCTT
GTACTTCACGAGATGGTTGATGTATGAGAGCACACAAGCAAGCCTCTTCT
TCTCCACCTCATCCTTAAGAGATTCCAACTTATGACACCTGTTGCAGATA
AAGCTTGTGTAACGATCAGATGCTAACTCTGCTCCATCTTGCAAAACCTC
AAGAATATCAACGAGGTAATCCCACTCTCCCTTTAAAATAATCTTGTCCA
ACGGATAAGCCATCTGGGGTGTGGTAGCAGAAGAATCATGAGGTGGAGTA
TTACGAGAACTGTGCGTGACAACACTTTCAGGGCCTCTTTGTTATCTGAC
TCCTCTATTTTCTGTCAATCTCTGTCGCAGGG
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Molecular Function
TermDefinition
GO:0003677DNA binding
GO:0003899DNA-directed 5'-3' RNA polymerase activity
Vocabulary: Cellular Component
TermDefinition
GO:0005634nucleus
Vocabulary: Biological Process
TermDefinition
GO:0006350transcription
Vocabulary: INTERPRO
TermDefinition
IPR009668RNA_pol-assoc_fac_A49-like