DW043497

EST Overview
NameDW043497
Unique NameDW043497
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length539
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
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BLAST of DW043497 vs. TrEMBL
Match: Q5KTS9|Q5KTS9_DAUCA (Dehydrin protein OS=Daucus carota GN=CAISE1 PE=2 SV=1)

HSP 1 Score: 58.151 bits (139), Expect = 3.997e-7
Identity = 25/36 (69.44%), Postives = 30/36 (83.33%), Query Frame = 3 
Query:   96 MAQYGSGGYPGRQ---TDEFGNPIRQTDEYGNPVQH 194
            MA YG GGY G++   +DE+GNP+RQTDEYGNPVQH
Sbjct:    1 MASYGEGGYGGQKHHGSDEYGNPVRQTDEYGNPVQH 36
The following BLAST results are available for this feature:
BLAST of DW043497 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
Q5KTS9|Q5KTS9_DAUCA3.997e-769.44Dehydrin protein OS=Daucus carota GN=CAISE1 PE=2 S... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 17..27
score: NAcoord: 39..67
score
NoneNo IPR availableSEGsegsegcoord: 1..18
score: NAcoord: 20..30
score: NAcoord: 38..51
score
NoneNo IPR availableSEGsegsegcoord: 92..104
score
NoneNo IPR availableSEGsegsegcoord: 64..78
score
NoneNo IPR availableSEGsegsegcoord: 34..45
score
NoneNo IPR availableSEGsegsegcoord: 44..87
score: NAcoord: 92..120
score
NoneNo IPR availableSEGsegsegcoord: 14..28
score
IPR000167DehydrinPFAMPF00257Dehydrincoord: 23..127
score: 1.5
IPR000167DehydrinPROSITEPS00315DEHYDRIN_1coord: 95..111
score
IPR000167DehydrinPROSITEPS00823DEHYDRIN_2coord: 116..123
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043497 ID=DW043497; Name=DW043497; organism=Vaccinium corymbosum; type=EST; length=539bp
GACAAACATCCTTACGAAATTGTATCCTTGTTCGAATCTCAGTTGAATTA
CGTATGTGTTCTTAGCTCCTGTTTTTTGAGACCCAAAAAAACAAAATGGC
ACAGTATGGAAGTGGAGGGTATCCGGGTCGCCAGACAGACGAGTTTGGCA
ACCCGATTCGTCAAACGGACGAGTATGGAAACCCGGTTCAACACACGGGC
GGTACCATGGGAGAGTATGGAACAACAGGCAACACGGGTGCGTACGGAAC
AGCTGGCACCGGCGGCATGGGGCAGCAGCAGCAGCTTCATCATCATCAGC
AGCAGCAGGAGCATGGCGTTGCTGGGATGCTTCACCGCTCTGGCTCCAGC
TCTAGCTCCTCGGAGTCCGATGGGGAAGGTGGGAGAAGGAAGAAAAAAGG
AATGAAGGAAAAGATAAAGGAAAAGTTACCAGGGGGCCCCAAACCAGCGA
CTACCCTTCCCTGAAACTCCCCCCCCCTCCCGCCGGACCCCAGTGGTATT
GCGTACTNGGAGCCNGACCCCAGAAAAAGATATTGCAAA
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: Biological Process
TermDefinition
GO:0006950response to stress
GO:0009415response to water
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated
IPR000167Dehydrin