HO054880 | GDV

EST Overview


Name	HO054880
Unique Name	HO054880
Type	EST
Organism	Vaccinium corymbosum (northern highbush blueberry)
Sequence length	882

Libraries


Library Name	Type
LIBEST_026368 Short-term aluminum-stress in root cv. Brigitta cDNA-AFLP	cdna_library

Unigenes

This EST is part of the following unigenes:


Unigene Name	Analysis Name	Sequence type in Unigene
	Vaccinium corymbosum unigene v1	EST

Analyses

This EST is derived from or has results from the following analyses


Analysis Name	Date Performed
Vaccinium corymbosum unigene v1	2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v1	2011-01-18

InterPro

Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	SEG	seg	seg	coord: 24..35 score: NAcoord: 48..62 score
None	No IPR available	SEG	seg	seg	coord: 18..33 score
None	No IPR available	SEG	seg	seg	coord: 14..30 score
None	No IPR available	SEG	seg	seg	coord: 28..36 score

Properties


Property Name	Value
Singlet in analysis	Vaccinium corymbosum unigene v1

Sequences

The following sequences are available for this feature:

EST sequence

EST sequence

>HO054880 ID=HO054880; Name=HO054880; organism=Vaccinium corymbosum; type=EST; length=882bp
AANNNGGGCTGATGATGAGCTCACTGCCTCTGGTAGGTGAGCTGGATTGA
CTTTGAGGATGGGAGCTGGGGGTTCATGGAGATTTCTAGGTTTTGGTCCT
CGGAAAAATCAAGGGTACTGTTTGGGAATAAAAAATGTTAAAAAGCGAAT
GACACTGGATTGATTGGGACACTCGAACTCCACAATCCTCACTCAGAGTC
TGGAGGAGAGGCGCTTGGTCTCAACTCTGTTGCTGGTTTGCTCCCCAGTG
TTGCCTGTATCTGGGGGGCCCACGAAAAGCGCCAGACAAGGAATATTTTG
CATTAATTTGCTTCATCACGGGACGGCAACGGAGGCCAGCGGTCCCATGC
CTTTGCTGTTGATCAAGAGGATGAAAAAGTCTCACCCTAATTGTAATTCT
GCCAGGCCCCAGGCTGCACTGGGAGGCGGACAATTGCTGTGGTGCAGCCG
CCAGACAGGAATCGGTGTTGCTGCGCCCTTGCCGTTCTTGTCGTTCTTCT
CAGCGGGGAGCGAGATATGAGCAACATGTTACTCCAGTCGACTCCGTTCA
GCTCCTTGCTTCGCTCCNTCACTTTGACCTCTTAGAAAAACACGTAGTCA
TTCCTTAAGTCTTGCTCTCGTGGGATGTTCTAGTGNTATAANCTAACACT
ACACCATGTATANTGGACAATGTGACTATCTTAGACCTGGAGAGTATGGA
TCAGGATGAGACATCACTACTATTAAGTCGCTACTGTGCTAGCTTAGCGA
ATCTTTACACTCTGATAAATGGACNACTGTTCAAAAAACGTGAATCTCCT
ACTGCACGATGACAATCTCCTCTTCCCGTTGTTCCGATACGCGTCTACGC
ATTAGTCACGCAGATTGCCTCCTTGGCAGGAT

Annotated Terms

The following terms have been associated with this EST:

Vocabulary: **INTERPRO**
Term	Definition
noIPR	unintegrated