SCF101064, SCF101064 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF101064
Genbank ID	KP278805
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GT)9
Primer 1	SCF101064.forward primer: CATCAGACAGAAAGCAGTTAAG
Primer 2	SCF101064.reverse primer: CCCCAAGTATATTAGCAAACAC
Max Length	302
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278805

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG4	N/A	80.16	SCF101064	View
2	Cranberry-Mullica_Queen-2007	LG4	N/A	85.3	SCF101064	View
3	Cranberry-CNJ02-1-2017	LG04	N/A	84	SCF101064	View
4	Cranberry-Mullica_Queen-2017	LG04	N/A	89.5	SCF101064	View
5	Cranberry-Composite_map-F1	LG04	N/A	62.31	SCF101064	View
6	Cranberry-Stevens-F1	LG04	N/A	40.56	SCF101064	View

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold00753	supercontig	scaffold00753:95280..95514 .
Chr03_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr03_Vaccinium_vitis-idaea_ssp_minus:9206482..9206741 .