SCF141794, SCF141794 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF141794
Genbank ID	KP278877
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(AAG)7
Primer 1	SCF141794.forward primer: CCATCTGCATCTATTGTTTTG
Primer 2	SCF141794.reverse primer: CATTTGTAGGTCTATCTTTCGC
Max Length	164
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278877

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr02	supercontig	Vmac_chr02:34840960..34841086 .
chr2	supercontig	chr2:34928499..34928625 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-[BGx(BLxNL)]95_x_ GH1x35-F1	LG2	N/A	3.62	SCF141794	View
2	Cranberry-CNJ02-1-2007	LG2	N/A	13.84	SCF141794	View
3	Cranberry-Crimson_Queen-2007	LG2	N/A	10.8	SCF141794	View
4	Cranberry-Mullica_Queen-2007	LG2	N/A	17.5	SCF141794	View
5	Cranberry-CNJ02-1-2017	LG02	N/A	14.6	SCF141794	View
6	Cranberry-Crimson_Queen-2017	LG02	N/A	9.6	SCF141794	View
7	Cranberry-Mullica_Queen-2017	LG02	N/A	16.2	SCF141794	View
8	Cranberry-Composite_map-F1	LG02	N/A	89.43	SCF141794	View
9	Cranberry-Crimson_Queen-F1	LG02	N/A	88.83	SCF141794	View
10	Cranberry-Mullica_Queen_1-F1	LG02	N/A	98.91	SCF141794	View