SCF161998, SCF161998 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF161998
Genbank ID	KP278911
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GT)9
Primer 1	SCF161998.forward primer: ATATACCAGTGCTCTTTCCATC
Primer 2	SCF161998.reverse primer: AGACTTCTTTCTCCAAAGGC
Max Length	275
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278911

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG11	N/A	57.08	SCF161998	View
2	Cranberry-Mullica_Queen-2007	LG11	N/A	65.8	SCF161998	View
3	Cranberry-CNJ02-1-2017	LG11	N/A	54.4	SCF161998	View
4	Cranberry-Mullica_Queen-2017	LG11	N/A	60.1	SCF161998	View
5	Cranberry-Composite_map-F1	LG11	N/A	57.76	SCF161998	View
6	Cranberry-Mullica_Queen_1-F1	LG11	N/A	66.33	SCF161998	View
7	Cranberry-Mullica_Queen_2-F1	LG11	N/A	60.1	SCF161998	View

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr11	supercontig	Vmac_chr11:30620014..30620260 .
chr11	supercontig	chr11:28963974..28964220 .