SCF174394, SCF174394 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF174394
Genbank ID	KP278925
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(CT)9
Primer 1	SCF174394.forward primer: GGTGGATGGAATGCTAAATA
Primer 2	SCF174394.reverse primer: CTTTATTGGTAGTGGATTGGAC
Max Length	263
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278925

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr10	supercontig	Vmac_chr10:6648579..6648811 .
chr10	supercontig	chr10:5971104..5971336 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG10	N/A	19.54	SCF174394	View
2	Cranberry-Crimson_Queen-2007	LG10	N/A	18.7	SCF174394	View
3	Cranberry-Mullica_Queen-2007	LG10	N/A	26.1	SCF174394	View
4	Cranberry-CNJ02-1-2017	LG10	N/A	11	SCF174394	View
5	Cranberry-Crimson_Queen-2017	LG10	N/A	8.7	SCF174394	View
6	Cranberry-Mullica_Queen-2017	LG10	N/A	14.5	SCF174394	View
7	Cranberry-Composite_map-F1	LG10	N/A	61.46	SCF174394	View
8	Cranberry-Crimson_Queen-F1	LG10	N/A	62.59	SCF174394	View
9	Cranberry-Mullica_Queen_1-F1	LG10	N/A	71.75	SCF174394	View
10	Cranberry-Mullica_Queen_2-F1	LG10	N/A	57.95	SCF174394	View
11	Cranberry-Stevens-F1	LG10	N/A	63.1	SCF174394	View