SCF22442, SCF22442 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF22442
Genbank ID	KP278657
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(CT)11
Primer 1	SCF22442.forward primer: ACAAAGAAAGACACTCCATCTC
Primer 2	SCF22442.reverse primer: GTATTTGACTTCCATGACCAC
Max Length	348
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278657

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr06	supercontig	Vmac_chr06:26376838..26377149 .
chr6	supercontig	chr6:12945408..12945721 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG6	N/A	43.81	SCF22442	View
2	Cranberry-Crimson_Queen-2007	LG6	N/A	37.5	SCF22442	View
3	Cranberry-Mullica_Queen-2007	LG6	N/A	54.9	SCF22442	View
4	Cranberry-CNJ02-1-2017	LG06	N/A	41.8	SCF22442	View
5	Cranberry-Crimson_Queen-2017	LG06	N/A	36.4	SCF22442	View
6	Cranberry-Mullica_Queen-2017	LG06	N/A	47.3	SCF22442	View
7	Cranberry-Composite_map-F1	LG06	N/A	53.07	SCF22442	View
8	Cranberry-Crimson_Queen-F1	LG06	N/A	49.49	SCF22442	View
9	Cranberry-Mullica_Queen_1-F1	LG06	N/A	57.89	SCF22442	View