SCF46739, SCF46739 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF46739
Genbank ID	KP278716
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(TC)10
Primer 1	SCF46739.forward primer: ATGTTAGGTGATGCTGTTGTC
Primer 2	SCF46739.reverse primer: CAGGTGCTTATTTTCGTTTC
Max Length	249
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278716

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr04	supercontig	Vmac_chr04:11622113..11622334 .
chr4	supercontig	chr4:24242432..24242651 .

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG4	N/A	35.48	SCF46739	View
2	Cranberry-Crimson_Queen-2007	LG4	N/A	27.9	SCF46739	View
3	Cranberry-Mullica_Queen-2007	LG4	N/A	39.4	SCF46739	View
4	Cranberry-CNJ02-1-2017	LG04	N/A	35.2	SCF46739	View
5	Cranberry-Crimson_Queen-2017	LG04	N/A	3.7	SCF46739	View
6	Cranberry-Mullica_Queen-2017	LG04	N/A	35.7	SCF46739	View
7	Cranberry-Composite_map-F1	LG04	N/A	20.36	SCF46739	View
8	Cranberry-Crimson_Queen-F1	LG04	N/A	26.18	SCF46739	View
9	Cranberry-GH1/35-F1	LG04	N/A	19.3	SCF46739	View
10	Cranberry-Mullica_Queen_1-F1	LG04	N/A	40.58	SCF46739	View
11	Cranberry-BB/CQ-F1	LG02	N/A	36.42	SCF46739	View