SCF8850, SCF8850 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF8850
Genbank ID	KP278623
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GA)10
Primer 1	SCF8850.forward primer: GTGTGATGTATTTAAGGAGTACCAC
Primer 2	SCF8850.reverse primer: ACAGATAGAGTAGTTACCAAGGGA
Max Length	356
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278623

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-[BGx(BLxNL)]95_x_ GH1x35-F1	LG8	N/A	55.62	SCF8850	View
2	Cranberry-CNJ02-1-2007	LG8	N/A	64.79	SCF8850	View
3	Cranberry-Crimson_Queen-2007	LG8	N/A	62.6	SCF8850	View
4	Cranberry-Mullica_Queen-2007	LG8	N/A	67.1	SCF8850	View
5	Cranberry-CNJ02-1-2017	LG08	N/A	61.5	SCF8850	View
6	Cranberry-Crimson_Queen-2017	LG08	N/A	57.4	SCF8850	View
7	Cranberry-Mullica_Queen-2017	LG08	N/A	62.5	SCF8850	View
8	Cranberry-[BG//BL/BN]95-F1	LG08	N/A	22.25	SCF8850	View
9	Cranberry-Composite_map-F1	LG08	N/A	25.19	SCF8850	View
10	Cranberry-Crimson_Queen-F1	LG08	N/A	13.7	SCF8850	View
11	Cranberry-Mullica_Queen_1-F1	LG08	N/A	40.21	SCF8850	View
12	Cranberry-Mullica_Queen_2-F1	LG08	N/A	43.69	SCF8850	View
13	Cranberry-Stevens-F1	LG08	N/A	7.48	SCF8850	View

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr08	supercontig	Vmac_chr08:10737858..10738174 .
chr8	supercontig	chr8:10363222..10363545 .