vm54153, vm54153 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	vm54153
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GAA)9
Primer 1	vm54153.forward primer: GATATTTCCAGCTTCTCCCT
Primer 2	vm54153.reverse primer: GCTATAGTGTCATTCGAGTCTG
Product Length	138
Max Length	144
Publication	[view all]

Publications


Year	Publication
2012	Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE. Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jan; 124(1):87-96.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Chr03_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr03_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:2444117..2444225 .
scaffold00237	supercontig	scaffold00237:84019..84142 .
Vmac_chr04	supercontig	Vmac_chr04:34383494..34383611 .
chr4	supercontig	chr4:1482872..1482989 .
Chr03	supercontig	Chr03:2195466..2195571 .
Chr03_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr03_Vaccinium_vitis-idaea_ssp_minus:2189598..2189706 .