vm59107, vm59107 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	vm59107
Genbank ID	N/A
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GAG)7
Primer 1	vm59107.forward primer: GAGCGTTAGTGATTATTGTGTG
Primer 2	vm59107.reverse primer: GTTAAGCACTGAAGGAAGACC
Product Length	215
Max Length	224
Publication	[view all]

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Vmac_chr06	supercontig	Vmac_chr06:36316363..36316558 .	Vaccinium macrocarpon cv. Ben Lear v1.0 genome sequence	GDV marker alignment to genome using primer sequences
chr6	supercontig	chr6:3325230..3325425 .	Vaccinium macrocarpon cv. Stevens v1.0 genome sequence	GDV marker alignment to genome using primer sequences

Publications


Year	Publication
2012	Zhu H, Senalik D, McCown BH, Zeldin EL, Speers J, Hyman J, Bassil N, Hummer K, Simon PW, Zalapa JE. Mining and validation of pyrosequenced simple sequence repeats (SSRs) from American cranberry (Vaccinium macrocarpon Ait.). TAG. Theoretical and applied genetics. Theoretische und angewandte Genetik. 2012 Jan; 124(1):87-96.