KAN262 | GDV

Marker Overview

Marker Overview


Name	KAN262
Genbank ID	N/A
Type	SSR
Species	Vaccinium spp.
Repeat Motif	(CAC)8
Primer 1	KAN262.Forward: CGCCCACTCAGTTCATTCTT
Primer 2	KAN262.Reverse: ATAGGTGGTGGCTGGTGAGT
Publication	[view all]
Contact	Nahla Bassil

Contact

Name

Details

Nahla Bassil

First name:	Nahla
Last name:	Bassil
Institution:	USDA-ARS
Country:	United States
Email:	nahla.bassil@usda.gov
Last update:	Jan 2020

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Vcev1_p0.Chr03	supercontig	Vcev1_p0.Chr03:48756536..48756803 .	Vaccinium caesariense clone W85-20 P0 v2.0 genome sequence	GDV marker alignment to genome using primer sequences
scaffold00039	supercontig	scaffold00039:161595..161860 .	Vaccinium corymbosum W8520 draft genome sequence	GDV marker alignment to genome using primer sequences

Publications


Year	Publication
2020	Bassil N, Bidani A, Nyberg A, Hummer K, Rowland LJ. Microsatellite markers confirm identity of blueberry (Vaccinium spp.) plants in the USDA-ARS National Clonal Germplasm Repository collection. Genet Resour Crop Evol. 2020 (67):393-409.