CA230.2 | GDV

Marker Overview

Marker Overview


Name	CA230.2
Genbank ID	N/A
Type	EST-SSR
Species	Vaccinium corymbosum
Primer 1	CA230.2.Forward: GAGAGGGTTTCGAGGAGGAG
Primer 2	CA230.2.Reverse: GTTTAGAAACGGGACTGTGAGACG
Publication	[view all]
Contact	Samir Debnath

Contact

Name

Details

Samir Debnath

First name:	Samir
Last name:	Debnath
Institution:	St. John’s Research and Development Centre
Country:	Canada
Email:	samir.debnath@canada.ca
Last update:	Mar 2021

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Vcev1_p0.Chr01	supercontig	Vcev1_p0.Chr01:27434476..27434630 .	Vaccinium caesariense clone W85-20 P0 v2.0 genome sequence	GDV marker alignment to genome using primer sequences
VaccDscaff1	supercontig	VaccDscaff1:21688832..21688983 .	Vaccinium corymbosum cv. Draper v1.0 genome sequence	GDV marker alignment to genome using primer sequences
scaffold00577	supercontig	scaffold00577:100270..100424 .	Vaccinium corymbosum W8520 draft genome sequence	GDV marker alignment to genome using primer sequences
chr1_H1	supercontig	chr1_H1:24461964..24462115 .	Vaccinium darrowii clone NJ8810/NJ8807 v1.2 genome sequence	GDV marker alignment to genome using primer sequences
Vmac_chr06	supercontig	Vmac_chr06:18602986..18603140 .	Vaccinium macrocarpon cv. Ben Lear v1.0 genome sequence	GDV marker alignment to genome using primer sequences
chr6	supercontig	chr6:20473806..20473960 .	Vaccinium macrocarpon cv. Stevens v1.0 genome sequence	GDV marker alignment to genome using primer sequences

Publications


Year	Publication
2021	Bhatt DS, Debnath SC. Genetic Diversity of Blueberry Genotypes Estimated by Antioxidant Properties and Molecular Markers.. Antioxidants (Basel, Switzerland). 2021 Mar 15; 10(3).