Mo001 | GDV

Marker Overview

Marker Overview


Name	Mo001
Genbank ID	N/A
Type	SSR
Species	Vaccinium floribundum
Repeat Motif	(TTCCTG)48
Primer 1	Mo001.Forward: AACCTGTACAAGTCTACCCCTACCG
Primer 2	Mo001.Reverse: TAATAACAGAACATCAGTGCAAGGC
Publication	[view all]
Contact	Maria de Lourdes Torres

Contact

Name

Details

Maria de Lourdes Torres

First name:	Maria
Last name:	de Lourdes Torres
Institution:	Universidad San Francisco de Quito
Country:	Ecuador
Email:	ltorres@usfq.edu.ec
Last update:	Dec 2020

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Chr02_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr02_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:29897407..29897713 .	Vaccinium vitis-idaea ssp. vitis-idaea cv. Red Candy v1.0 genome	GDV marker alignment to genome using primer sequences
Chr02_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr02_Vaccinium_vitis-idaea_ssp_minus:29042378..29042678 .	Vaccinium vitis-idaea ssp. minus v1.0 genome	GDV marker alignment to genome using primer sequences

Publications


Year	Publication
2020	Vega-Polo P, Cobo MM, Argudo A, Gutierrez B, Rowntree J, Torres ML. Characterizing the genetic diversity of the Andean blueberry (Vaccinium floribundum Kunth.) across the Ecuadorian Highlands.. PloS one. 2020; 15(12):e0243420.