Mo011 | GDV

Marker Overview

Marker Overview


Name	Mo011
Genbank ID	N/A
Type	SSR
Species	Vaccinium floribundum
Repeat Motif	(TTC)24
Primer 1	Mo011.Forward: GCGAGAGTATTGGTGTTCATGC
Primer 2	Mo011.Reverse: CAGGTATAGATATACTGGGTTTTGAGG
Publication	[view all]
Contact	Maria de Lourdes Torres

Contact

Name

Details

Maria de Lourdes Torres

First name:	Maria
Last name:	de Lourdes Torres
Institution:	Universidad San Francisco de Quito
Country:	Ecuador
Email:	ltorres@usfq.edu.ec
Last update:	Dec 2020

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
VaccDscaff15	supercontig	VaccDscaff15:5440633..5440905 .	Vaccinium corymbosum cv. Draper v1.0 genome sequence	GDV marker alignment to genome using primer sequences
scaffold00709	supercontig	scaffold00709:40980..41274 .	Vaccinium corymbosum W8520 draft genome sequence	GDV marker alignment to genome using primer sequences
chr6_H1	supercontig	chr6_H1:7008646..7008918 .	Vaccinium darrowii clone NJ8810/NJ8807 v1.2 genome sequence	GDV marker alignment to genome using primer sequences
Vmac_chr09	supercontig	Vmac_chr09:28189921..28190214 .	Vaccinium macrocarpon cv. Ben Lear v1.0 genome sequence	GDV marker alignment to genome using primer sequences
chr9	supercontig	chr9:13293173..13293466 .	Vaccinium macrocarpon cv. Stevens v1.0 genome sequence	GDV marker alignment to genome using primer sequences

Publications


Year	Publication
2020	Vega-Polo P, Cobo MM, Argudo A, Gutierrez B, Rowntree J, Torres ML. Characterizing the genetic diversity of the Andean blueberry (Vaccinium floribundum Kunth.) across the Ecuadorian Highlands.. PloS one. 2020; 15(12):e0243420.