KAN11563, KAN11563 (genetic_marker) Vaccinium corymbosum | GDV

Marker Overview

Marker Overview


Name	KAN11563
Genbank ID	N/A
Type	SSR
Species	Vaccinium corymbosum
Repeat Motif	(ATGT)5
Primer 1	KAN11563.forward primer: GGATCGCATGTATGCTTCCT
Primer 2	KAN11563.reverse primer: ACCAGCCTCTCAGTGTTGCT
Max Length	282
Publication	[view all]

Publications


Year	Publication
2014	Bian Y, Ballington J, Raja A, Brouwer C, Reid R, Burke M, Wang X, Rowland LJ, Bassil N, Brown A. Patterns of simple sequence repeats in cultivated blueberries (Vaccinium section Cyanococcus spp.) and their use in revealing genetic diversity and population structure. Molecular breeding. 2014; 34(2):675-689.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr05	supercontig	Vcev1_p0.Chr05:250396..250632 .
VaccDscaff31	supercontig	VaccDscaff31:33467799..33468035 .
scaffold00334	supercontig	scaffold00334:5544..5781 .
chr5_H1	supercontig	chr5_H1:929001..929261 .
Vmac_chr12	supercontig	Vmac_chr12:1001885..1002141 .
chr12	supercontig	chr12:1021915..1022171 .
Chr05	supercontig	Chr05:235272..235530 .
Chr05_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr05_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:232894..233150 .
Chr05_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr05_Vaccinium_vitis-idaea_ssp_minus:20248..20504 .