blueberry-BNJ16-4_BNJ16-5-F1

Map Overview


Name	blueberry-BNJ16-4_BNJ16-5-F1
Species	Vaccinium sp.
Analysis method	Kosambi
Software	JoinMap v5
Map type	genetic
Population type	F1
Population size	1025
Map unit	cM
Maternal parent	BNJ05-218-9-F1
Paternal parent	BNJ05-237-8-F1
Population size	949
Number of loci	2090
Number of QTL	16
Number of linkage groups	12
Publication	[view all]
Contact	Ira Herniter

Stock

Name

Type

Details

BNJ16-4-F1

population

Origin country:	USA
Population size:	949
Germplasm center:	Philip E. Marucci Center for Research and Extension

Contact

Name

Details

Ira Herniter

First name:	Ira
Last name:	Herniter
Institution:	Rutgers University
Country:	USA
Email:	ira.herniter@rutgers.edu

Publication


Year	Publications
2023	Herniter IA, Kim Y, Wang Y, Havill JS, Johnson-Cicalese J, Muehlbauer GJ, Iorizzo M, Vorsa N. Trait Mapping of Phenolic Acids in an Interspecific (Vaccinium corymbosum var. caesariense × V. darrowii) Diploid Blueberry Population.. Plants (Basel, Switzerland). 2023 Mar 16; 12(6).

Map Loci

This map contains 2,090 marker loci:

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Linkage Group	Marker Name	Locus Name	Type	Position
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	16882:383:+	16882:383:+	marker_locus	33.59 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	17158:568:+	17158:568:+	marker_locus	33.68 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	17377:369:-	17377:369:-	marker_locus	33.95 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	17377:80:-	17377:80:-	marker_locus	34.64 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	17880:128:+	17880:128:+	marker_locus	37.41 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	25061:581:+	25061:581:+	marker_locus	46.38 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	25061:657:+	25061:657:+	marker_locus	46.95 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	26253:305:-	26253:305:-	marker_locus	48.91 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	29386:42:-	29386:42:-	marker_locus	53.8 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	29579:10:+	29579:10:+	marker_locus	58.02 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	30602:403:-	30602:403:-	marker_locus	59.28 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	30395:566:-	30395:566:-	marker_locus	59.28 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	30803:563:-	30803:563:-	marker_locus	62.45 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	32829:181:+	32829:181:+	marker_locus	62.67 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	33421:113:+	33421:113:+	marker_locus	63.24 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	33594:211:-	33594:211:-	marker_locus	63.24 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	33594:74:-	33594:74:-	marker_locus	63.24 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	34269:53:-	34269:53:-	marker_locus	64.26 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	34641:115:+	34641:115:+	marker_locus	64.39 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	35162:74:+	35162:74:+	marker_locus	64.6 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	36076:67:+	36076:67:+	marker_locus	65.32 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	36489:113:+	36489:113:+	marker_locus	65.44 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	36584:134:-	36584:134:-	marker_locus	65.87 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	36682:338:-	36682:338:-	marker_locus	66.17 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr01	36682:386:-	36682:386:-	marker_locus	66.17 cM

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Last

Map QTL

This map contains 16 QTL:

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Linkage Group	Name	Type	Start	Stop	Peak
blueberry-BNJ16-4_BNJ16-5-F1.Chr02	qACQAC.BNJ16-4_BNJ16-5.2019.2	QTL	0 cM	51.1 cM	29.8 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr02	qACQAC.BNJ16-4_BNJ16-5.2020.2	QTL	1 cM	51.1 cM	26.1 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr02	qACQAC.BNJ16-4_BNJ16-5.BLUP.2	QTL	2 cM	51.1 cM	29.8 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr02	qACQAC.BNJ16-4_BNJ16-5.2020-2.2	QTL	3 cM	51.1 cM	26.1 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr02	qACQAC.BNJ16-4_BNJ16-5.BLUP-2.2	QTL	4 cM	51.1 cM	29.8 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr02	qACQAC.BNJ16-4_BNJ16-5.2019-2.2	QTL	2.4 cM	51.1 cM	29.8 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr02	qCHAC.BNJ16-4_BNJ16-5.BLUP.2	QTL	2.4 cM	73.1 cM	26.1 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr02	qCHAC.BNJ16-4_BNJ16-5.2019.2	QTL	3.6 cM	57 cM	35.8 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr02	qCHAC.BNJ16-4_BNJ16-5.2020.2	QTL	6.3 cM	75.9 cM	26.1 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr02	qCAFC.BNJ16-4_BNJ16-5.2020.2	QTL	35.8 cM	40.4 cM	40.4 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr07	qCAFC.BNJ16-4_BNJ16-5.2019.7	QTL	42 cM	58.3 cM	50.1 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr07	qCAFC.BNJ16-4_BNJ16-5.2020.7	QTL	50.1 cM	62.8 cM	50.1 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr07	qCAFC.BNJ16-4_BNJ16-5.BLUP.7	QTL	50.1 cM	60.2 cM	50.1 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr12	qCAFC.BNJ16-4_BNJ16-5.2019.12	QTL	57.9 cM	98.6 cM	75.6 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr12	qCAFC.BNJ16-4_BNJ16-5.2020.12	QTL	68.9 cM	111.1 cM	75.3 cM
blueberry-BNJ16-4_BNJ16-5-F1.Chr12	qCAFC.BNJ16-4_BNJ16-5.BLUP.12	QTL	69.1 cM	94.3 cM	75.6 cM

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