KAN15483, KAN15483 (genetic_marker) Vaccinium corymbosum | GDV

Marker Overview

Marker Overview


Name	KAN15483
Genbank ID	N/A
Type	SSR
Species	Vaccinium corymbosum
Repeat Motif	(GA)7
Primer 1	KAN15483.forward primer: CAACTTTGGCAGTTTCCCAT
Primer 2	KAN15483.reverse primer: GTTGAAGGTGTCTTTGGGGA
Max Length	286
Publication	[view all]

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Vcev1_p0.Chr03	supercontig	Vcev1_p0.Chr03:36475316..36475567 .	Vaccinium caesariense clone W85-20 P0 v2.0 genome sequence	GDV marker alignment to genome using primer sequences
VaccDscaff36	supercontig	VaccDscaff36:14207986..14208237 .	Vaccinium corymbosum cv. Draper v1.0 genome sequence	GDV marker alignment to genome using primer sequences
scaffold00746	supercontig	scaffold00746:7211..7464 .	Vaccinium corymbosum W8520 draft genome sequence	GDV marker alignment to genome using primer sequences
chr3_H1	supercontig	chr3_H1:31663807..31664062 .	Vaccinium darrowii clone NJ8810/NJ8807 v1.2 genome sequence	GDV marker alignment to genome using primer sequences
Chr03_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr03_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:14088701..14088963 .	Vaccinium vitis-idaea ssp. vitis-idaea cv. Red Candy v1.0 genome	GDV marker alignment to genome using primer sequences
Chr03_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr03_Vaccinium_vitis-idaea_ssp_minus:14384556..14384816 .	Vaccinium vitis-idaea ssp. minus v1.0 genome	GDV marker alignment to genome using primer sequences

Publications


Year	Publication
2014	Bian Y, Ballington J, Raja A, Brouwer C, Reid R, Burke M, Wang X, Rowland LJ, Bassil N, Brown A. Patterns of simple sequence repeats in cultivated blueberries (Vaccinium section Cyanococcus spp.) and their use in revealing genetic diversity and population structure. Molecular breeding. 2014; 34(2):675-689.