KAN25430, KAN25430 (genetic_marker) Vaccinium corymbosum | GDV

Marker Overview

Marker Overview


Name	KAN25430
Genbank ID	N/A
Type	SSR
Species	Vaccinium corymbosum
Repeat Motif	(CTG)5
Primer 1	KAN25430.forward primer: CCCGCCCTATTATCTCATCA
Primer 2	KAN25430.reverse primer: GTTGTTGGGGTTTCTGCTGT
Max Length	258
Publication	[view all]

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Vcev1_p0.Chr01	supercontig	Vcev1_p0.Chr01:55871535..55871769 .	Vaccinium caesariense clone W85-20 P0 v2.0 genome sequence	GDV marker alignment to genome using primer sequences
scaffold00202	supercontig	scaffold00202:77417..77651 .	Vaccinium corymbosum W8520 draft genome sequence	GDV marker alignment to genome using primer sequences
Vmac_chr06	supercontig	Vmac_chr06:37406505..37406732 .	Vaccinium macrocarpon cv. Ben Lear v1.0 genome sequence	GDV marker alignment to genome using primer sequences
chr6	supercontig	chr6:2268442..2268669 .	Vaccinium macrocarpon cv. Stevens v1.0 genome sequence	GDV marker alignment to genome using primer sequences

Publications


Year	Publication
2014	Bian Y, Ballington J, Raja A, Brouwer C, Reid R, Burke M, Wang X, Rowland LJ, Bassil N, Brown A. Patterns of simple sequence repeats in cultivated blueberries (Vaccinium section Cyanococcus spp.) and their use in revealing genetic diversity and population structure. Molecular breeding. 2014; 34(2):675-689.