KAN28196, KAN28196 (genetic_marker) Vaccinium corymbosum | GDV

Marker Overview

Marker Overview


Name	KAN28196
Genbank ID	N/A
Type	SSR
Species	Vaccinium corymbosum
Repeat Motif	(AATA)5
Primer 1	KAN28196.forward primer: AAAAACAAGTGGTTTCAAATATGC
Primer 2	KAN28196.reverse primer: GTTAACGGAGCACGTGAATG
Max Length	276
Publication	[view all]

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
scaffold00108	supercontig	scaffold00108:225779..226038 .	Vaccinium corymbosum W8520 draft genome sequence	GDV marker alignment to genome using primer sequences
Chr12_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr12_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:35324168..35324426 .	Vaccinium vitis-idaea ssp. vitis-idaea cv. Red Candy v1.0 genome	GDV marker alignment to genome using primer sequences

Publications


Year	Publication
2014	Bian Y, Ballington J, Raja A, Brouwer C, Reid R, Burke M, Wang X, Rowland LJ, Bassil N, Brown A. Patterns of simple sequence repeats in cultivated blueberries (Vaccinium section Cyanococcus spp.) and their use in revealing genetic diversity and population structure. Molecular breeding. 2014; 34(2):675-689.