CF810608

EST Overview
NameCF810608
Unique NameCF810608
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length601
Libraries
Library NameType
LIBEST_014530 cDNA cold acclimated Bluecrop librarycdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
[Close]
BLAST of CF810608 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s19000.1 ()

HSP 1 Score: 131.339 bits (329), Expect = 4.277e-31
Identity = 63/76 (82.89%), Postives = 69/76 (90.79%), Query Frame = 1 
Query:    1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228
            VASS+R LADA E SK TI+A +LLQAVMEID L+EA+QMYAFEYLNADPIKARAFMTY+ RMRKIYLFRQFWWWK
Sbjct:  225 VASSLRRLADAMELSKITINASELLQAVMEIDGLDEAKQMYAFEYLNADPIKARAFMTYDTRMRKIYLFRQFWWWK 300
[Close]
BLAST of CF810608 vs. P. persica 1.0 peptide
Match: ppa009122m ()

HSP 1 Score: 136.732 bits (343), Expect = 7.212e-33
Identity = 65/76 (85.53%), Postives = 70/76 (92.11%), Query Frame = 1 
Query:    1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228
            VASSIR LADA EQSK +IDA +LLQAVMEID LEEARQMYAFEYLNADP+KARAFM YNA+MRK+YLFRQFWWWK
Sbjct:  231 VASSIRRLADAMEQSKYSIDASELLQAVMEIDGLEEARQMYAFEYLNADPVKARAFMAYNAQMRKLYLFRQFWWWK 306
[Close]
BLAST of CF810608 vs. TrEMBL
Match: B9SHU8|B9SHU8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0621650 PE=4 SV=1)

HSP 1 Score: 136.732 bits (343), Expect = 1.201e-30
Identity = 65/76 (85.53%), Postives = 70/76 (92.11%), Query Frame = 1 
Query:    1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228
            VASSIR LADA EQSK  I+A +LL+AVMEID LEEA+QMYAFEYLNADPIKARAFMTYNARMRK+YLFRQFWWWK
Sbjct:  227 VASSIRRLADAMEQSKTAINASELLRAVMEIDGLEEAKQMYAFEYLNADPIKARAFMTYNARMRKVYLFRQFWWWK 302
[Close]
BLAST of CF810608 vs. TrEMBL
Match: D7UD33|D7UD33_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_112.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012454001 PE=4 SV=1)

HSP 1 Score: 135.191 bits (339), Expect = 3.495e-30
Identity = 63/76 (82.89%), Postives = 70/76 (92.11%), Query Frame = 1 
Query:    1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228
            VA+SIR LADA E+ KN++D+ +LLQAVMEID LEEARQMYAFEYLNADPIKARAFMTYN RMRKI+LFRQFWWWK
Sbjct:  204 VATSIRRLADALERRKNSVDSSELLQAVMEIDGLEEARQMYAFEYLNADPIKARAFMTYNVRMRKIFLFRQFWWWK 279
[Close]
BLAST of CF810608 vs. TrEMBL
Match: B9GXA9|B9GXA9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_800252 PE=4 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.047e-29
Identity = 63/76 (82.89%), Postives = 69/76 (90.79%), Query Frame = 1 
Query:    1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228
            VASS+R LADA E SK TI+A +LLQAVMEID L+EA+QMYAFEYLNADPIKARAFMTY+ RMRKIYLFRQFWWWK
Sbjct:  225 VASSLRRLADAMELSKITINASELLQAVMEIDGLDEAKQMYAFEYLNADPIKARAFMTYDTRMRKIYLFRQFWWWK 300
[Close]
BLAST of CF810608 vs. TrEMBL
Match: Q8GYR6|Q8GYR6_ARATH (Putative uncharacterized protein At4g02550/T10P11_16 OS=Arabidopsis thaliana GN=At4g02550/T10P11_16 PE=2 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.169e-27
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 
Query:    1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228
            VASSIR LADA  QSK  I+  +LL+AVMEID+LEEA+QMYAFEYLN DP+KARAFM YN RMRK++LFRQFWWWK
Sbjct:  203 VASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK 278
[Close]
BLAST of CF810608 vs. TrEMBL
Match: Q2V3L7|Q2V3L7_ARATH (Putative uncharacterized protein At4g02550.3 OS=Arabidopsis thaliana GN=At4g02550 PE=4 SV=1)

HSP 1 Score: 124.405 bits (311), Expect = 6.169e-27
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 
Query:    1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228
            VASSIR LADA  QSK  I+  +LL+AVMEID+LEEA+QMYAFEYLN DP+KARAFM YN RMRK++LFRQFWWWK
Sbjct:  247 VASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK 322
[Close]
BLAST of CF810608 vs. TrEMBL
Match: O22772|O22772_ARATH (Putative uncharacterized protein AT4g02550 OS=Arabidopsis thaliana GN=AT4g02550 PE=2 SV=2)

HSP 1 Score: 124.405 bits (311), Expect = 6.169e-27
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 
Query:    1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228
            VASSIR LADA  QSK  I+  +LL+AVMEID+LEEA+QMYAFEYLN DP+KARAFM YN RMRK++LFRQFWWWK
Sbjct:  232 VASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK 307
[Close]
BLAST of CF810608 vs. Vitis vinifera peptide
Match: GSVIVT01012454001 (assembled CDS)

HSP 1 Score: 135.191 bits (339), Expect = 1.796e-32
Identity = 63/76 (82.89%), Postives = 70/76 (92.11%), Query Frame = 1 
Query:    1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228
            VA+SIR LADA E+ KN++D+ +LLQAVMEID LEEARQMYAFEYLNADPIKARAFMTYN RMRKI+LFRQFWWWK
Sbjct:  204 VATSIRRLADALERRKNSVDSSELLQAVMEIDGLEEARQMYAFEYLNADPIKARAFMTYNVRMRKIFLFRQFWWWK 279
[Close]
BLAST of CF810608 vs. TAIR peptide
Match: AT4G02550.4 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2). | chr4:1120622-1121629 REVERSE LENGTH=278)

HSP 1 Score: 124.405 bits (311), Expect = 4.606e-29
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 
Query:    1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228
            VASSIR LADA  QSK  I+  +LL+AVMEID+LEEA+QMYAFEYLN DP+KARAFM YN RMRK++LFRQFWWWK
Sbjct:  203 VASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK 278
[Close]
BLAST of CF810608 vs. TAIR peptide
Match: AT4G02550.3 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:1120622-1121674 REVERSE LENGTH=322)

HSP 1 Score: 124.405 bits (311), Expect = 4.606e-29
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 
Query:    1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228
            VASSIR LADA  QSK  I+  +LL+AVMEID+LEEA+QMYAFEYLN DP+KARAFM YN RMRK++LFRQFWWWK
Sbjct:  247 VASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK 322
[Close]
BLAST of CF810608 vs. TAIR peptide
Match: AT4G02550.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 370 Blast hits to 300 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 10; Plants - 354; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr4:1120622-1121629 REVERSE LENGTH=307)

HSP 1 Score: 124.405 bits (311), Expect = 4.606e-29
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 
Query:    1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228
            VASSIR LADA  QSK  I+  +LL+AVMEID+LEEA+QMYAFEYLN DP+KARAFM YN RMRK++LFRQFWWWK
Sbjct:  232 VASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK 307
[Close]
BLAST of CF810608 vs. TAIR peptide
Match: AT4G02550.2 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 350 Blast hits to 284 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 13; Plants - 331; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr4:1120622-1121629 REVERSE LENGTH=278)

HSP 1 Score: 124.405 bits (311), Expect = 4.606e-29
Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 
Query:    1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228
            VASSIR LADA  QSK  I+  +LL+AVMEID+LEEA+QMYAFEYLN DP+KARAFM YN RMRK++LFRQFWWWK
Sbjct:  203 VASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK 278
The following BLAST results are available for this feature:
BLAST of CF810608 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0003s19000.14.277e-3182.89[more]
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BLAST of CF810608 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
ppa009122m7.212e-3385.53[more]
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BLAST of CF810608 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 6
Match NameE-valueIdentityDescription
B9SHU8|B9SHU8_RICCO1.201e-3085.53Putative uncharacterized protein OS=Ricinus commun... [more]
D7UD33|D7UD33_VITVI3.495e-3082.89Whole genome shotgun sequence of line PN40024, sca... [more]
B9GXA9|B9GXA9_POPTR5.047e-2982.89Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
Q8GYR6|Q8GYR6_ARATH6.169e-2776.32Putative uncharacterized protein At4g02550/T10P11_... [more]
Q2V3L7|Q2V3L7_ARATH6.169e-2776.32Putative uncharacterized protein At4g02550.3 OS=Ar... [more]
O22772|O22772_ARATH6.169e-2776.32Putative uncharacterized protein AT4g02550 OS=Arab... [more]
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BLAST of CF810608 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010124540011.796e-3282.89assembled CDS[more]
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BLAST of CF810608 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide)
Total hits: 4
Match NameE-valueIdentityDescription
AT4G02550.44.606e-2976.32| Symbols: | unknown protein; FUNCTIONS IN: molec... [more]
AT4G02550.34.606e-2976.32| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT4G02550.14.606e-2976.32| Symbols: | unknown protein; BEST Arabidopsis th... [more]
AT4G02550.24.606e-2976.32| Symbols: | unknown protein; BEST Arabidopsis th... [more]
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Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CF810608 ID=CF810608; Name=CF810608; organism=Vaccinium corymbosum; type=EST; length=601bp
GTTGCGTCAAGCATTCGACACTTGGCTGATGCATTTGAACAAAGTAAGAA
CACAATTGATGCCCCTCAACTTCTACAAGCTGTGATGGAAATTGACGACT
TGGAAGAGGCTAGGCAAATGTATGCGTTTGAGTACTTAAATGCTGACCCA
ATCAAAGCCAGAGCATTCATGACTTACAATGCCAGAATGAGGAAAATATA
CTTATTCCGGCAGTTCTGGTGGTGGAAGTGATTGGGGGATTTTACCGGTG
ACTGAACACAGGGACAGTCTAGTCAGCAGCCAAATTACTGTTTGTTGAAA
CTTTTAACTCATTATTCTTGTACATTTTATTGAGTGGAAGTCTAGAGGTG
AATGTCTTACGTTCGATGTTGTACAGATTCTGTTGCCAGATCACATCGAC
GCTAATTGTATGATCTTTTTGACTGTTCTAAAGTGAAGATTCATTAAAAG
TAGGGATATAAAACTGTCCCCTTTTTTATTTTTTGTTTTCCAGTAATGCT
ATCTGATGCTGTTAACAGATTTAGTGGCCGTGTTAGATTGTTTTTACTTG
GAATCAGATTCTTGCCATGCGCACTAGCTCAAGCGTGACCCATTTAGTTT
T
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