CF810608
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CF810608 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0003s19000.1 () HSP 1 Score: 131.339 bits (329), Expect = 4.277e-31 Identity = 63/76 (82.89%), Postives = 69/76 (90.79%), Query Frame = 1 Query: 1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228 VASS+R LADA E SK TI+A +LLQAVMEID L+EA+QMYAFEYLNADPIKARAFMTY+ RMRKIYLFRQFWWWK Sbjct: 225 VASSLRRLADAMELSKITINASELLQAVMEIDGLDEAKQMYAFEYLNADPIKARAFMTYDTRMRKIYLFRQFWWWK 300
BLAST of CF810608 vs. P. persica 1.0 peptide
Match: ppa009122m () HSP 1 Score: 136.732 bits (343), Expect = 7.212e-33 Identity = 65/76 (85.53%), Postives = 70/76 (92.11%), Query Frame = 1 Query: 1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228 VASSIR LADA EQSK +IDA +LLQAVMEID LEEARQMYAFEYLNADP+KARAFM YNA+MRK+YLFRQFWWWK Sbjct: 231 VASSIRRLADAMEQSKYSIDASELLQAVMEIDGLEEARQMYAFEYLNADPVKARAFMAYNAQMRKLYLFRQFWWWK 306
BLAST of CF810608 vs. TrEMBL
Match: B9SHU8|B9SHU8_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0621650 PE=4 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.201e-30 Identity = 65/76 (85.53%), Postives = 70/76 (92.11%), Query Frame = 1 Query: 1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228 VASSIR LADA EQSK I+A +LL+AVMEID LEEA+QMYAFEYLNADPIKARAFMTYNARMRK+YLFRQFWWWK Sbjct: 227 VASSIRRLADAMEQSKTAINASELLRAVMEIDGLEEAKQMYAFEYLNADPIKARAFMTYNARMRKVYLFRQFWWWK 302
BLAST of CF810608 vs. TrEMBL
Match: D7UD33|D7UD33_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_112.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00012454001 PE=4 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.495e-30 Identity = 63/76 (82.89%), Postives = 70/76 (92.11%), Query Frame = 1 Query: 1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228 VA+SIR LADA E+ KN++D+ +LLQAVMEID LEEARQMYAFEYLNADPIKARAFMTYN RMRKI+LFRQFWWWK Sbjct: 204 VATSIRRLADALERRKNSVDSSELLQAVMEIDGLEEARQMYAFEYLNADPIKARAFMTYNVRMRKIFLFRQFWWWK 279
BLAST of CF810608 vs. TrEMBL
Match: B9GXA9|B9GXA9_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_800252 PE=4 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 5.047e-29 Identity = 63/76 (82.89%), Postives = 69/76 (90.79%), Query Frame = 1 Query: 1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228 VASS+R LADA E SK TI+A +LLQAVMEID L+EA+QMYAFEYLNADPIKARAFMTY+ RMRKIYLFRQFWWWK Sbjct: 225 VASSLRRLADAMELSKITINASELLQAVMEIDGLDEAKQMYAFEYLNADPIKARAFMTYDTRMRKIYLFRQFWWWK 300
BLAST of CF810608 vs. TrEMBL
Match: Q8GYR6|Q8GYR6_ARATH (Putative uncharacterized protein At4g02550/T10P11_16 OS=Arabidopsis thaliana GN=At4g02550/T10P11_16 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.169e-27 Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 Query: 1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228 VASSIR LADA QSK I+ +LL+AVMEID+LEEA+QMYAFEYLN DP+KARAFM YN RMRK++LFRQFWWWK Sbjct: 203 VASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK 278
BLAST of CF810608 vs. TrEMBL
Match: Q2V3L7|Q2V3L7_ARATH (Putative uncharacterized protein At4g02550.3 OS=Arabidopsis thaliana GN=At4g02550 PE=4 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 6.169e-27 Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 Query: 1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228 VASSIR LADA QSK I+ +LL+AVMEID+LEEA+QMYAFEYLN DP+KARAFM YN RMRK++LFRQFWWWK Sbjct: 247 VASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK 322
BLAST of CF810608 vs. TrEMBL
Match: O22772|O22772_ARATH (Putative uncharacterized protein AT4g02550 OS=Arabidopsis thaliana GN=AT4g02550 PE=2 SV=2) HSP 1 Score: 124.405 bits (311), Expect = 6.169e-27 Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 Query: 1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228 VASSIR LADA QSK I+ +LL+AVMEID+LEEA+QMYAFEYLN DP+KARAFM YN RMRK++LFRQFWWWK Sbjct: 232 VASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK 307
BLAST of CF810608 vs. Vitis vinifera peptide
Match: GSVIVT01012454001 (assembled CDS) HSP 1 Score: 135.191 bits (339), Expect = 1.796e-32 Identity = 63/76 (82.89%), Postives = 70/76 (92.11%), Query Frame = 1 Query: 1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228 VA+SIR LADA E+ KN++D+ +LLQAVMEID LEEARQMYAFEYLNADPIKARAFMTYN RMRKI+LFRQFWWWK Sbjct: 204 VATSIRRLADALERRKNSVDSSELLQAVMEIDGLEEARQMYAFEYLNADPIKARAFMTYNVRMRKIFLFRQFWWWK 279
BLAST of CF810608 vs. TAIR peptide
Match: AT4G02550.4 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 7 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2). | chr4:1120622-1121629 REVERSE LENGTH=278) HSP 1 Score: 124.405 bits (311), Expect = 4.606e-29 Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 Query: 1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228 VASSIR LADA QSK I+ +LL+AVMEID+LEEA+QMYAFEYLN DP+KARAFM YN RMRK++LFRQFWWWK Sbjct: 203 VASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK 278
BLAST of CF810608 vs. TAIR peptide
Match: AT4G02550.3 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink). | chr4:1120622-1121674 REVERSE LENGTH=322) HSP 1 Score: 124.405 bits (311), Expect = 4.606e-29 Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 Query: 1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228 VASSIR LADA QSK I+ +LL+AVMEID+LEEA+QMYAFEYLN DP+KARAFM YN RMRK++LFRQFWWWK Sbjct: 247 VASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK 322
BLAST of CF810608 vs. TAIR peptide
Match: AT4G02550.1 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 370 Blast hits to 300 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 10; Plants - 354; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr4:1120622-1121629 REVERSE LENGTH=307) HSP 1 Score: 124.405 bits (311), Expect = 4.606e-29 Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 Query: 1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228 VASSIR LADA QSK I+ +LL+AVMEID+LEEA+QMYAFEYLN DP+KARAFM YN RMRK++LFRQFWWWK Sbjct: 232 VASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK 307
BLAST of CF810608 vs. TAIR peptide
Match: AT4G02550.2 (| Symbols: | unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02210.2); Has 350 Blast hits to 284 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 13; Plants - 331; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | chr4:1120622-1121629 REVERSE LENGTH=278) HSP 1 Score: 124.405 bits (311), Expect = 4.606e-29 Identity = 58/76 (76.32%), Postives = 66/76 (86.84%), Query Frame = 1 Query: 1 VASSIRHLADAFEQSKNTIDAPQLLQAVMEIDDLEEARQMYAFEYLNADPIKARAFMTYNARMRKIYLFRQFWWWK 228 VASSIR LADA QSK I+ +LL+AVMEID+LEEA+QMYAFEYLN DP+KARAFM YN RMRK++LFRQFWWWK Sbjct: 203 VASSIRRLADAVVQSKTLINTEELLKAVMEIDELEEAKQMYAFEYLNGDPVKARAFMAYNNRMRKMFLFRQFWWWK 278 The following BLAST results are available for this feature:
BLAST of CF810608 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of CF810608 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 1
BLAST of CF810608 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 6
BLAST of CF810608 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
BLAST of CF810608 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 4
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CF810608 ID=CF810608; Name=CF810608; organism=Vaccinium corymbosum; type=EST; length=601bpback to top |