CV190171

EST Overview
NameCV190171
Unique NameCV190171
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length575
Libraries
Library NameType
LIBEST_016374 Vco01cdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Homology
BLAST of CV190171 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0017s12730.1 ()

HSP 1 Score: 48.521 bits (114), Expect = 7.962e-8
Identity = 46/138 (33.33%), Postives = 54/138 (39.13%), Query Frame = 3
Query:  105 DPQT-LRPPGVDPAGSSVGGAHEAYDPSVLYAHSEYYQDPNVANSLKNW-ALEVLRYYGSNPNDAASDTGAIMHPT----------------NATLQPHGNSXXXXXXXXXX-----VVQSVWCEVCKVECNTKEVLD 449
            DP T L PPGV           E+Y     Y H  Y  DPN       W A E +R YGS P    +     + P                 N T    GNS               VVQS +CEVCKV+CN+K+VLD
Sbjct:   56 DPTTGLTPPGV-----------ESYTN---YPHLAYCFDPNS----NTWVAKEAVRQYGSAPAAFPAPVSNTIPPNGTEQLAVSHLDSTLWANLTFLAQGNSNQKKQQKKTQQKKTKVVQSAYCEVCKVDCNSKDVLD 175          

HSP 2 Score: 25.0238 bits (53), Expect = 7.962e-8
Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1
Query:  523 AASRVSINPSIGPQENP 573
            + S  S NP IGPQENP
Sbjct:  198 SVSAGSNNPVIGPQENP 214          
BLAST of CV190171 vs. TrEMBL
Match: C6TD17|C6TD17_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 3.577e-10
Identity = 52/150 (34.67%), Postives = 69/150 (46.00%), Query Frame = 3
Query:  117 LRPPGVDPAGSSVGGAHEAYDP--SVLYAHSEYYQDPNVANSLK-NW-ALEVLRYYGSNPNDAA---------SDTGAIMHP-----TNATLQPHGNSXXXXXXXXXXVVQSVWCEVCKVECNTKEVLDXXXXXXXXXXXXXXLTESITP 512
            L PPGVDP       ++ A++P   ++YA S    D +    L  NW A E +R +G++P   A         S+  A+ +P     TN T QPH N           VVQ  +CEVCK+EC  KEVLD              L ES+TP
Sbjct:   48 LNPPGVDPQTPLNPISYAAHEPVPGLVYAQSLVGDDSSSGYCLDHNWVAREAVRQFGTDPTLYAPGISLPPNGSEQLAMANPSSLWWTNTTTQPHVNGTPKKNQKKTKVVQPAFCEVCKIECTGKEVLDQHKLGKKHKKNVEKLRESLTP 197          
BLAST of CV190171 vs. Vitis vinifera peptide
Match: GSVIVT01011505001 (assembled CDS)

HSP 1 Score: 54.299 bits (129), Expect = 5.971e-9
Identity = 45/158 (28.48%), Postives = 66/158 (41.77%), Query Frame = 3
Query:  117 LRPPGVDP-------AGSSVGGAHEAYDPSVLYAH-----------SEYYQDPNVANSLKNWALEVLRYYGS---NPNDAASDTGAIMHP---TNATLQPHGNSXXXXXXXXXXVVQSVWCEVCKVECNTKEVLDXXXXXXXXXXXXXXLTESITPPP 518
            LRPPGVD          + VG  HEA  P V YAH           S+ YQ P    S ++W  + + Y  S    PN       A ++    T +T+Q   +           ++QS +CEVCKV+CN+ ++L               L +++ P P
Sbjct:  444 LRPPGVDSYAYLNSHPATRVG--HEATQPVVTYAHYTLGSASSTMPSDCYQAP----SAQSWGAKPIGYAVSLAIPPNGTEQLITANVNSILWTTSTVQARSSGTRKKGAKKMKIIQSAYCEVCKVDCNSDDILAQHKLGRRHKKNMEKLKDTVAPVP 595          

HSP 2 Score: 22.3274 bits (46), Expect = 5.971e-9
Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 1
Query:  538 SINPSIGPQENP 573
            S NP IGP ENP
Sbjct:  601 SDNPVIGPPENP 612          
The following BLAST results are available for this feature:
BLAST of CV190171 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0017s12730.17.962e-833.33[more]
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BLAST of CV190171 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 1
Match NameE-valueIdentityDescription
C6TD17|C6TD17_SOYBN3.577e-1034.67Putative uncharacterized protein OS=Glycine max PE... [more]
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BLAST of CV190171 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide)
Total hits: 1
Match NameE-valueIdentityDescription
GSVIVT010115050015.971e-928.48assembled CDS[more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 54..58
score
NoneNo IPR availableSEGsegsegcoord: 10..26
score
NoneNo IPR availableSEGsegsegcoord: 14..27
score: NAcoord: 119..128
score: NAcoord: 150..163
score
NoneNo IPR availableSEGsegsegcoord: 51..63
score
NoneNo IPR availableSEGsegsegcoord: 14..25
score: NAcoord: 52..64
score
NoneNo IPR availableSEGsegsegcoord: 2..15
score: NAcoord: 139..150
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>CV190171 ID=CV190171; Name=CV190171; organism=Vaccinium corymbosum; type=EST; length=575bp
GGCGAGCATCCATGGACAACACAGCAACTCATCATCAAGTCTACGCCTCC
TCCCCCTACTACGCCTCCCACTCCCACCCACCGCAAGTCCCCGTTTCTGG
CGTCGACCCACAAACCCTGAGGCCTCCTGGGGTGGACCCCGCTGGCTCCT
CTGTTGGCGGTGCACACGAAGCATATGATCCCAGTGTGCTCTATGCTCAC
TCCGAGTACTATCAAGATCCGAATGTGGCTAATTCTTTGAAGAATTGGGC
GTTGGAAGTGCTTCGGTATTATGGGTCGAACCCGAATGATGCCGCGAGTG
ATACCGGTGCAATAATGCATCCAACTAATGCAACACTTCAACCACATGGA
AATAGCACTAAGAAGAAGGGTGCAAAGAAAACTACGGTTGTACAATCTGT
GTGGTGTGAAGTTTGCAAGGTTGAATGCAACACCAAGGAAGTTCTTGACA
AGCACAAAATGGGAAAGAAGCACAAGAAGACGGAGGAGAAACTAACAGAG
TCAATTACCCCTCCTCCCCCGAGCTGCTTCGCGAGTGTCTATTAATCCAT
CGATTGGACCACAAGAAAACCCTGC
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated