CV190171
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of CV190171 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0017s12730.1 () HSP 1 Score: 48.521 bits (114), Expect = 7.962e-8 Identity = 46/138 (33.33%), Postives = 54/138 (39.13%), Query Frame = 3 Query: 105 DPQT-LRPPGVDPAGSSVGGAHEAYDPSVLYAHSEYYQDPNVANSLKNW-ALEVLRYYGSNPNDAASDTGAIMHPT----------------NATLQPHGNSXXXXXXXXXX-----VVQSVWCEVCKVECNTKEVLD 449 DP T L PPGV E+Y Y H Y DPN W A E +R YGS P + + P N T GNS VVQS +CEVCKV+CN+K+VLD Sbjct: 56 DPTTGLTPPGV-----------ESYTN---YPHLAYCFDPNS----NTWVAKEAVRQYGSAPAAFPAPVSNTIPPNGTEQLAVSHLDSTLWANLTFLAQGNSNQKKQQKKTQQKKTKVVQSAYCEVCKVDCNSKDVLD 175 HSP 2 Score: 25.0238 bits (53), Expect = 7.962e-8 Identity = 11/17 (64.71%), Postives = 12/17 (70.59%), Query Frame = 1 Query: 523 AASRVSINPSIGPQENP 573 + S S NP IGPQENP Sbjct: 198 SVSAGSNNPVIGPQENP 214
BLAST of CV190171 vs. TrEMBL
Match: C6TD17|C6TD17_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.577e-10 Identity = 52/150 (34.67%), Postives = 69/150 (46.00%), Query Frame = 3 Query: 117 LRPPGVDPAGSSVGGAHEAYDP--SVLYAHSEYYQDPNVANSLK-NW-ALEVLRYYGSNPNDAA---------SDTGAIMHP-----TNATLQPHGNSXXXXXXXXXXVVQSVWCEVCKVECNTKEVLDXXXXXXXXXXXXXXLTESITP 512 L PPGVDP ++ A++P ++YA S D + L NW A E +R +G++P A S+ A+ +P TN T QPH N VVQ +CEVCK+EC KEVLD L ES+TP Sbjct: 48 LNPPGVDPQTPLNPISYAAHEPVPGLVYAQSLVGDDSSSGYCLDHNWVAREAVRQFGTDPTLYAPGISLPPNGSEQLAMANPSSLWWTNTTTQPHVNGTPKKNQKKTKVVQPAFCEVCKIECTGKEVLDQHKLGKKHKKNVEKLRESLTP 197
BLAST of CV190171 vs. Vitis vinifera peptide
Match: GSVIVT01011505001 (assembled CDS) HSP 1 Score: 54.299 bits (129), Expect = 5.971e-9 Identity = 45/158 (28.48%), Postives = 66/158 (41.77%), Query Frame = 3 Query: 117 LRPPGVDP-------AGSSVGGAHEAYDPSVLYAH-----------SEYYQDPNVANSLKNWALEVLRYYGS---NPNDAASDTGAIMHP---TNATLQPHGNSXXXXXXXXXXVVQSVWCEVCKVECNTKEVLDXXXXXXXXXXXXXXLTESITPPP 518 LRPPGVD + VG HEA P V YAH S+ YQ P S ++W + + Y S PN A ++ T +T+Q + ++QS +CEVCKV+CN+ ++L L +++ P P Sbjct: 444 LRPPGVDSYAYLNSHPATRVG--HEATQPVVTYAHYTLGSASSTMPSDCYQAP----SAQSWGAKPIGYAVSLAIPPNGTEQLITANVNSILWTTSTVQARSSGTRKKGAKKMKIIQSAYCEVCKVDCNSDDILAQHKLGRRHKKNMEKLKDTVAPVP 595 HSP 2 Score: 22.3274 bits (46), Expect = 5.971e-9 Identity = 9/12 (75.00%), Postives = 9/12 (75.00%), Query Frame = 1 Query: 538 SINPSIGPQENP 573 S NP IGP ENP Sbjct: 601 SDNPVIGPPENP 612 The following BLAST results are available for this feature:
BLAST of CV190171 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of CV190171 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 1
BLAST of CV190171 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 1
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >CV190171 ID=CV190171; Name=CV190171; organism=Vaccinium corymbosum; type=EST; length=575bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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