DW043396

EST Overview
NameDW043396
Unique NameDW043396
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length656
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide2011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
InterProScan analysis for Vaccinium corymbosum unigene v12011-01-18
Homology
BLAST of DW043396 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s33080.1 ()

HSP 1 Score: 69.3218 bits (168), Expect = 2.314e-12
Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = -1
Query:   27 VELASVWNIDLRLRNWSDYWIAYKSTVSNFRGLTVMASEAGAEGEREDSGFD--SVPSFDVSEVRNSCCGRYKSVMRKQLEQLAWRETVKEEREGVEMEAGSL-NRCGEEGNSGSVEFDNGYDEELLHQQTRLTSLLMLPSQMDSEENGCMEDV 479
            VELAS++  D +    SD+++       +F              E+E   F   +V S D S + +S  G+ +  + KQL ++  R  V+   +G E+   +  +RC  + N  S+E +NG DEELLHQQT  TSLLMLP+ +D+ EN C+ D+
Sbjct:  115 VELASLFGFDFK----SDFFVDSDPGSCSF--------------EQEAVNFQDFAVSSDDFSVLSSS--GKSRQEVYKQLVEMGKRGMVRVNGDGAELGPDTPPSRCAVQWNLESLELENG-DEELLHQQTPFTSLLMLPNHVDASENDCVSDL 247          
BLAST of DW043396 vs. TrEMBL
Match: A5C9I4|A5C9I4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043320 PE=4 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.518e-11
Identity = 55/152 (36.18%), Postives = 76/152 (50.00%), Query Frame = -1
Query:   39 SAVELASVWNIDLRLRNWSDYWIAYKSTVSNFRGLTVMASE---AGAEGEREDSGFDSVPSFDVSEVRNSCCGRYKSVMRKQLEQLAWRETVKEEREGVEMEAGSLNRCGEEGNSGSVEFDNGYDEELLHQQTRLTSLLMLPSQMDSEENGC 485
            S +ELASV+ +DL+  NWS  W      V +F    V+  E   AG   + E +G   V    V  +R+        V+R  ++         E  +G E+  G+  RC   GN   V+ DNG DEELL QQT  TSLLMLP+ +D+ + GC
Sbjct:  108 SPLELASVFRVDLKDGNWSS-WNFGSVNVQDF----VVPGENCYAGCGTKVEKNGISVVYEQLVDLIRSDV-----DVVRGDVDGDG-----DEGEDGAELGPGTPGRCANMGNFQGVDLDNGDDEELLRQQTPFTSLLMLPTPVDARDTGC 244          
BLAST of DW043396 vs. TrEMBL
Match: B9GFG8|B9GFG8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_752788 PE=4 SV=1)

HSP 1 Score: 69.3218 bits (168), Expect = 2.863e-10
Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = -1
Query:   27 VELASVWNIDLRLRNWSDYWIAYKSTVSNFRGLTVMASEAGAEGEREDSGFD--SVPSFDVSEVRNSCCGRYKSVMRKQLEQLAWRETVKEEREGVEMEAGSL-NRCGEEGNSGSVEFDNGYDEELLHQQTRLTSLLMLPSQMDSEENGCMEDV 479
            VELAS++  D +    SD+++       +F              E+E   F   +V S D S + +S  G+ +  + KQL ++  R  V+   +G E+   +  +RC  + N  S+E +NG DEELLHQQT  TSLLMLP+ +D+ EN C+ D+
Sbjct:  115 VELASLFGFDFK----SDFFVDSDPGSCSF--------------EQEAVNFQDFAVSSDDFSVLSSS--GKSRQEVYKQLVEMGKRGMVRVNGDGAELGPDTPPSRCAVQWNLESLELENG-DEELLHQQTPFTSLLMLPNHVDASENDCVSDL 247          
The following BLAST results are available for this feature:
BLAST of DW043396 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide)
Total hits: 1
Match NameE-valueIdentityDescription
POPTR_0001s33080.12.314e-1234.42[more]
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BLAST of DW043396 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 2
Match NameE-valueIdentityDescription
A5C9I4|A5C9I4_VITVI1.518e-1136.18Putative uncharacterized protein OS=Vitis vinifera... [more]
B9GFG8|B9GFG8_POPTR2.863e-1034.42Predicted protein OS=Populus trichocarpa GN=POPTRD... [more]
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InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableSEGsegsegcoord: 66..82
score
NoneNo IPR availableSEGsegsegcoord: 21..32
score: NAcoord: 43..56
score
NoneNo IPR availableSEGsegsegcoord: 33..62
score: NAcoord: 83..91
score
NoneNo IPR availableSEGsegsegcoord: 26..42
score
NoneNo IPR availableSEGsegsegcoord: 17..36
score
NoneNo IPR availableSEGsegsegcoord: 6..20
score: NAcoord: 30..41
score

Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043396 ID=DW043396; Name=DW043396; organism=Vaccinium corymbosum; type=EST; length=656bp
AGCGTGGTCGCGGCCGAGGTACTTCTAACGTCCTCCATACAACCATTTTC
TTCCGAATCCATCTGTGATGGTAGCATAAGAAGAGACGTGAGCCTTGTTT
GCTGATGCAACAACTCCTCATCATAACCATTATCAAACTCAACACTCCCT
GAATTCCCCTCCTCACCGCATCGATTCAGAGATCCAGCTTCCATTTCAAC
CCCTTCTCTCTCCTCCTTCACCGTTTCCCTCCAAGCCAACTGCTCCAACT
GCTTCCGCATCACGCTCTTGTACCTCCCACAACACGAATTCCTCACTTCC
GACACATCAAAACTCGGAACACTATCAAAACCAGAGTCCTCCCTTTCTCC
CTCCGCCCCTGCCTCGCTAGCCATCACAGTCAAACCTCGAAAATTCGAGA
CCGTTGACTTGTACGCAATCCAATAATCACTCCAGTTACGAAGCCTTAAG
TCGATATTCCAAACCGAAGCGAGCTCAACCGCCGACCGAACACCCCGAGG
AACCCCTCCACCGTGTACACCCGCGGTGGTGTCCCATTCGAGACACGCGG
AACCTCTTCCCCTGACACTTTCCCTTTCCCCTTCGCCCCTTTCCAAATTC
TCTTTGGTTTAACCCCCGACGGAAACCCCCTCCATTTNTTTCATTTTTNC
CCTTTT
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Annotated Terms
The following terms have been associated with this EST:
Vocabulary: INTERPRO
TermDefinition
noIPRunintegrated