DW043396
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DW043396 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0001s33080.1 () HSP 1 Score: 69.3218 bits (168), Expect = 2.314e-12 Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = -1 Query: 27 VELASVWNIDLRLRNWSDYWIAYKSTVSNFRGLTVMASEAGAEGEREDSGFD--SVPSFDVSEVRNSCCGRYKSVMRKQLEQLAWRETVKEEREGVEMEAGSL-NRCGEEGNSGSVEFDNGYDEELLHQQTRLTSLLMLPSQMDSEENGCMEDV 479 VELAS++ D + SD+++ +F E+E F +V S D S + +S G+ + + KQL ++ R V+ +G E+ + +RC + N S+E +NG DEELLHQQT TSLLMLP+ +D+ EN C+ D+ Sbjct: 115 VELASLFGFDFK----SDFFVDSDPGSCSF--------------EQEAVNFQDFAVSSDDFSVLSSS--GKSRQEVYKQLVEMGKRGMVRVNGDGAELGPDTPPSRCAVQWNLESLELENG-DEELLHQQTPFTSLLMLPNHVDASENDCVSDL 247
BLAST of DW043396 vs. TrEMBL
Match: A5C9I4|A5C9I4_VITVI (Putative uncharacterized protein OS=Vitis vinifera GN=VITISV_043320 PE=4 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.518e-11 Identity = 55/152 (36.18%), Postives = 76/152 (50.00%), Query Frame = -1 Query: 39 SAVELASVWNIDLRLRNWSDYWIAYKSTVSNFRGLTVMASE---AGAEGEREDSGFDSVPSFDVSEVRNSCCGRYKSVMRKQLEQLAWRETVKEEREGVEMEAGSLNRCGEEGNSGSVEFDNGYDEELLHQQTRLTSLLMLPSQMDSEENGC 485 S +ELASV+ +DL+ NWS W V +F V+ E AG + E +G V V +R+ V+R ++ E +G E+ G+ RC GN V+ DNG DEELL QQT TSLLMLP+ +D+ + GC Sbjct: 108 SPLELASVFRVDLKDGNWSS-WNFGSVNVQDF----VVPGENCYAGCGTKVEKNGISVVYEQLVDLIRSDV-----DVVRGDVDGDG-----DEGEDGAELGPGTPGRCANMGNFQGVDLDNGDDEELLRQQTPFTSLLMLPTPVDARDTGC 244
BLAST of DW043396 vs. TrEMBL
Match: B9GFG8|B9GFG8_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_752788 PE=4 SV=1) HSP 1 Score: 69.3218 bits (168), Expect = 2.863e-10 Identity = 53/154 (34.42%), Postives = 82/154 (53.25%), Query Frame = -1 Query: 27 VELASVWNIDLRLRNWSDYWIAYKSTVSNFRGLTVMASEAGAEGEREDSGFD--SVPSFDVSEVRNSCCGRYKSVMRKQLEQLAWRETVKEEREGVEMEAGSL-NRCGEEGNSGSVEFDNGYDEELLHQQTRLTSLLMLPSQMDSEENGCMEDV 479 VELAS++ D + SD+++ +F E+E F +V S D S + +S G+ + + KQL ++ R V+ +G E+ + +RC + N S+E +NG DEELLHQQT TSLLMLP+ +D+ EN C+ D+ Sbjct: 115 VELASLFGFDFK----SDFFVDSDPGSCSF--------------EQEAVNFQDFAVSSDDFSVLSSS--GKSRQEVYKQLVEMGKRGMVRVNGDGAELGPDTPPSRCAVQWNLESLELENG-DEELLHQQTPFTSLLMLPNHVDASENDCVSDL 247 The following BLAST results are available for this feature:
BLAST of DW043396 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 1
BLAST of DW043396 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DW043396 ID=DW043396; Name=DW043396; organism=Vaccinium corymbosum; type=EST; length=656bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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