DW043147

EST Overview
NameDW043147
Unique NameDW043147
TypeEST
OrganismVaccinium corymbosum (northern highbush blueberry)
Sequence length520
Libraries
Library NameType
LIBEST_018810 Subtracted cDNA library of Vaccinium corymbosumcdna_library
Unigenes
This EST is part of the following unigenes:
Unigene NameAnalysis NameSequence type in Unigene
Vaccinium corymbosum unigene v1EST
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
Vaccinium corymbosum unigene v12011-01-18
BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL2011-01-18
Homology
BLAST of DW043147 vs. TrEMBL
Match: B2BJD0|B2BJD0_RHOCT (Early light-induced protein 1 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 68.1662 bits (165), Expect = 1.985e-12
Identity = 41/71 (57.75%), Postives = 50/71 (70.42%), Query Frame = 1
Query:  196 TVMQSILVSPATGVAKPARVVG*KPMTPSCYMPRQQRNSSRLVRCMAKYGQKKEVXTP--SLVPKDRTARF 402
            +VMQSILVSP TGVAK A +   + +  SCY+PRQ RNS  LVRCMAK G+K+EV +P  + V K RT  F
Sbjct:    5 SVMQSILVSPVTGVAKGAGLS--RTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESPIEANVAKVRTDFF 73          

HSP 2 Score: 27.7202 bits (60), Expect = 1.985e-12
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  398 DFLRNVAFSGPTPERITG 451
            DF   +AFSGP PERI G
Sbjct:   71 DFFDLLAFSGPGPERING 88          
BLAST of DW043147 vs. TrEMBL
Match: B2BJD1|B2BJD1_RHOCT (Early light-induced protein 2 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 3.349e-12
Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 1
Query:  196 TVMQSILVSPATGVAKPARVVG*KPMTPSCYMPRQQRNSSRLVRCMAKYGQKKEVXTP 369
            +VMQSILVSP TGVAK A +   + +  SCY+PRQ RNS  LVRCMAK G+K+EV +P
Sbjct:    5 SVMQSILVSPVTGVAKGAGLN--RTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESP 60          

HSP 2 Score: 27.7202 bits (60), Expect = 3.349e-12
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  398 DFLRNVAFSGPTPERITG 451
            DF   +AFSGP PERI G
Sbjct:   71 DFFDLLAFSGPGPERING 88          
BLAST of DW043147 vs. TrEMBL
Match: B2BJD5|B2BJD5_RHOCT (Early light-induced protein 6 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 63.929 bits (154), Expect = 2.088e-11
Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 1
Query:  196 TVMQSILVSPATGVAKPARVVG*KPMT-PSCYMPRQQRNSSRLVRCMAKYGQKKEVXT 366
            +VMQSI+VSPATGVA     +    +   SCY+PRQ RNS  LVRCMAK GQK+EV T
Sbjct:    5 SVMQSIMVSPATGVATKGTGLSRSTIPRSSCYLPRQGRNSGALVRCMAKGGQKEEVGT 62          

HSP 2 Score: 28.4906 bits (62), Expect = 2.088e-11
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  398 DFLRNVAFSGPTPERITG 451
            DF   +AFSGP PERI G
Sbjct:   71 DFFNLLAFSGPGPERING 88          
BLAST of DW043147 vs. TrEMBL
Match: B2BJD2|B2BJD2_RHOCT (Early light-induced protein 3 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.301e-10
Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 1
Query:  196 TVMQSILVSPATGVAKPARVVG*KPMTPSCYMPRQQRNSSRLVRCMAKYGQKKEVXTP 369
            +VMQSILVSP TGVAK A +   + +  S Y+PRQ R+S  LVRCMAK G+K+EV +P
Sbjct:    5 SVMQSILVSPVTGVAKGAGLS--RTIPRSSYLPRQGRDSGMLVRCMAKDGKKEEVESP 60          

HSP 2 Score: 27.7202 bits (60), Expect = 1.301e-10
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  398 DFLRNVAFSGPTPERITG 451
            DF   +AFSGP PERI G
Sbjct:   71 DFFDLLAFSGPGPERING 88          
BLAST of DW043147 vs. TrEMBL
Match: B2BJD4|B2BJD4_RHOCT (Early light-induced protein 5 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 63.5438 bits (153), Expect = 4.809e-10
Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 1
Query:  196 TVMQSILVSPATGVAKPARVVG*KPMTPSCYMPRQQRNSSRLVRCMAKYGQKKEVXTP 369
            +VMQSI+VSP TGVAK   +    P +  CY+PRQ RNS  LVRCMAK GQK+E  +P
Sbjct:    5 SVMQSIMVSPVTGVAKGTGLSRTIPRS-CCYLPRQGRNSGMLVRCMAKGGQKEEAGSP 61          

HSP 2 Score: 24.2534 bits (51), Expect = 4.809e-10
Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 2
Query:  413 VAFSGPTPERITG 451
            +AF GP PERI G
Sbjct:   71 LAFKGPAPERING 83          
BLAST of DW043147 vs. TrEMBL
Match: B2BJD3|B2BJD3_RHOCT (Early light-induced protein 4 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 57.3806 bits (137), Expect = 3.007e-9
Identity = 32/48 (66.67%), Postives = 35/48 (72.92%), Query Frame = 1
Query:  196 TVMQSILVSPATGVAKPARVVG*KPMTPSCYMPRQQRNSSRLVRCMAK 339
            +VMQSILVSP TGVAK A +    P T  CY+PRQ RNS  LVRCMAK
Sbjct:    5 SVMQSILVSPVTGVAKGAGLSRTIPRT--CYLPRQGRNSGMLVRCMAK 50          

HSP 2 Score: 27.7202 bits (60), Expect = 3.007e-9
Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 2
Query:  398 DFLRNVAFSGPTPERITG 451
            DF   +AFSGP PERI G
Sbjct:   54 DFFDLLAFSGPGPERING 71          
BLAST of DW043147 vs. TrEMBL
Match: C9E439|C9E439_CAMSI (Putative early light induced protein 2 OS=Camellia sinensis GN=ELIP2 PE=2 SV=1)

HSP 1 Score: 51.6026 bits (122), Expect = 5.455e-7
Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 1
Query:  202 MQSILVSPATGVAKPARVVG*KPMTPSCYMPRQQRNSSRLVRCMAKYGQKKEV 360
            MQS+L  P T V   AR       TP  Y+P  Q+N+S  VRCMAKYGQK++V
Sbjct:    7 MQSVLARPVTSVTTRARF---GQFTPCSYVPYLQKNASMQVRCMAKYGQKEDV 56          

HSP 2 Score: 25.7942 bits (55), Expect = 5.455e-7
Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 2
Query:  413 VAFSGPTPERITG 451
            +AFSGP PERI G
Sbjct:   70 LAFSGPAPERING 82          
BLAST of DW043147 vs. TrEMBL
Match: B2BJD6|B2BJD6_RHOCT (Early light-induced protein 7 OS=Rhododendron catawbiense PE=2 SV=1)

HSP 1 Score: 48.9062 bits (115), Expect = 9.089e-7
Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 1
Query:  196 TVMQSILVSPATGVAKPARVVG*KPMTPSC-YMPRQQRNSSRLVRCMAKYGQKKEV------XTPSLVP 381
            +VMQSILVSP  GVAK    +G   + P+  +MP Q+R+SS +VRC A+ GQK++        TPS +P
Sbjct:    5 SVMQSILVSPVAGVAKG---LGSNRLRPAYRHMPHQRRSSSVVVRCTAENGQKEQAVPAATPSTPSPLP 70          

HSP 2 Score: 27.7202 bits (60), Expect = 9.089e-7
Identity = 12/18 (66.67%), Postives = 12/18 (66.67%), Query Frame = 2
Query:  398 DFLRNVAFSGPTPERITG 451
            DF    AFSGP PERI G
Sbjct:   83 DFFDVFAFSGPAPERING 100          
The following BLAST results are available for this feature:
BLAST of DW043147 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL)
Total hits: 8
Match NameE-valueIdentityDescription
B2BJD0|B2BJD0_RHOCT1.985e-1257.75Early light-induced protein 1 OS=Rhododendron cata... [more]
B2BJD1|B2BJD1_RHOCT3.349e-1262.07Early light-induced protein 2 OS=Rhododendron cata... [more]
B2BJD5|B2BJD5_RHOCT2.088e-1160.34Early light-induced protein 6 OS=Rhododendron cata... [more]
B2BJD2|B2BJD2_RHOCT1.301e-1058.62Early light-induced protein 3 OS=Rhododendron cata... [more]
B2BJD4|B2BJD4_RHOCT4.809e-1058.62Early light-induced protein 5 OS=Rhododendron cata... [more]
B2BJD3|B2BJD3_RHOCT3.007e-966.67Early light-induced protein 4 OS=Rhododendron cata... [more]
C9E439|C9E439_CAMSI5.455e-750.94Putative early light induced protein 2 OS=Camellia... [more]
B2BJD6|B2BJD6_RHOCT9.089e-746.38Early light-induced protein 7 OS=Rhododendron cata... [more]
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Properties
Property NameValue
Singlet in analysisVaccinium corymbosum unigene v1
Sequences
The following sequences are available for this feature:

EST sequence

>DW043147 ID=DW043147; Name=DW043147; organism=Vaccinium corymbosum; type=EST; length=520bp
GTACAATACAGTCCACANGCTCATGACATAAACACCTACACATCAAATGG
GACTATGTACACTCGCACGGTTATAAACGAATTAACGCACCTTAAGCGTG
GTCGCGGCACGAGGTACTAACAGCCATAGCACAATACACTACGAACCCTG
TAGCTACAACACCCTAAGCTAATAATCTACCAATGGCCGCCTCATACAGT
AATGCAGTCCATACTAGTGAGCCCGGCGACAGGTGTCGCCAAGCCGGCGC
GCGTGGTGGGATAGAAACCGATGACTCCTAGCTGCTATATGCCACGTCAG
CAGAGGAACTCTAGCCGGCTAGTGCGGTGCATGGCCAAGTATGGACAGAA
GAAGGAAGTANAAACTCCGTCCCTAGTCCCAAAGGATAGGACAGCCCGAT
TTTCTACGAAATGTCGCCTTTAGTGGGCCCACNCCGGAGAGAATCACGGG
CACAACTTGCATTGACTCNGCTTCCGTGGCATCCCTTACCCGGTGGGAAA
CTNTACAACTGCCTCTTTTG
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