DW043147
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of DW043147 vs. TrEMBL
Match: B2BJD0|B2BJD0_RHOCT (Early light-induced protein 1 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 1.985e-12 Identity = 41/71 (57.75%), Postives = 50/71 (70.42%), Query Frame = 1 Query: 196 TVMQSILVSPATGVAKPARVVG*KPMTPSCYMPRQQRNSSRLVRCMAKYGQKKEVXTP--SLVPKDRTARF 402 +VMQSILVSP TGVAK A + + + SCY+PRQ RNS LVRCMAK G+K+EV +P + V K RT F Sbjct: 5 SVMQSILVSPVTGVAKGAGLS--RTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESPIEANVAKVRTDFF 73 HSP 2 Score: 27.7202 bits (60), Expect = 1.985e-12 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 398 DFLRNVAFSGPTPERITG 451 DF +AFSGP PERI G Sbjct: 71 DFFDLLAFSGPGPERING 88
BLAST of DW043147 vs. TrEMBL
Match: B2BJD1|B2BJD1_RHOCT (Early light-induced protein 2 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 3.349e-12 Identity = 36/58 (62.07%), Postives = 44/58 (75.86%), Query Frame = 1 Query: 196 TVMQSILVSPATGVAKPARVVG*KPMTPSCYMPRQQRNSSRLVRCMAKYGQKKEVXTP 369 +VMQSILVSP TGVAK A + + + SCY+PRQ RNS LVRCMAK G+K+EV +P Sbjct: 5 SVMQSILVSPVTGVAKGAGLN--RTIPRSCYLPRQGRNSGMLVRCMAKDGRKEEVESP 60 HSP 2 Score: 27.7202 bits (60), Expect = 3.349e-12 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 398 DFLRNVAFSGPTPERITG 451 DF +AFSGP PERI G Sbjct: 71 DFFDLLAFSGPGPERING 88
BLAST of DW043147 vs. TrEMBL
Match: B2BJD5|B2BJD5_RHOCT (Early light-induced protein 6 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 63.929 bits (154), Expect = 2.088e-11 Identity = 35/58 (60.34%), Postives = 41/58 (70.69%), Query Frame = 1 Query: 196 TVMQSILVSPATGVAKPARVVG*KPMT-PSCYMPRQQRNSSRLVRCMAKYGQKKEVXT 366 +VMQSI+VSPATGVA + + SCY+PRQ RNS LVRCMAK GQK+EV T Sbjct: 5 SVMQSIMVSPATGVATKGTGLSRSTIPRSSCYLPRQGRNSGALVRCMAKGGQKEEVGT 62 HSP 2 Score: 28.4906 bits (62), Expect = 2.088e-11 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 398 DFLRNVAFSGPTPERITG 451 DF +AFSGP PERI G Sbjct: 71 DFFNLLAFSGPGPERING 88
BLAST of DW043147 vs. TrEMBL
Match: B2BJD2|B2BJD2_RHOCT (Early light-induced protein 3 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 1.301e-10 Identity = 34/58 (58.62%), Postives = 43/58 (74.14%), Query Frame = 1 Query: 196 TVMQSILVSPATGVAKPARVVG*KPMTPSCYMPRQQRNSSRLVRCMAKYGQKKEVXTP 369 +VMQSILVSP TGVAK A + + + S Y+PRQ R+S LVRCMAK G+K+EV +P Sbjct: 5 SVMQSILVSPVTGVAKGAGLS--RTIPRSSYLPRQGRDSGMLVRCMAKDGKKEEVESP 60 HSP 2 Score: 27.7202 bits (60), Expect = 1.301e-10 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 398 DFLRNVAFSGPTPERITG 451 DF +AFSGP PERI G Sbjct: 71 DFFDLLAFSGPGPERING 88
BLAST of DW043147 vs. TrEMBL
Match: B2BJD4|B2BJD4_RHOCT (Early light-induced protein 5 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 63.5438 bits (153), Expect = 4.809e-10 Identity = 34/58 (58.62%), Postives = 41/58 (70.69%), Query Frame = 1 Query: 196 TVMQSILVSPATGVAKPARVVG*KPMTPSCYMPRQQRNSSRLVRCMAKYGQKKEVXTP 369 +VMQSI+VSP TGVAK + P + CY+PRQ RNS LVRCMAK GQK+E +P Sbjct: 5 SVMQSIMVSPVTGVAKGTGLSRTIPRS-CCYLPRQGRNSGMLVRCMAKGGQKEEAGSP 61 HSP 2 Score: 24.2534 bits (51), Expect = 4.809e-10 Identity = 9/13 (69.23%), Postives = 10/13 (76.92%), Query Frame = 2 Query: 413 VAFSGPTPERITG 451 +AF GP PERI G Sbjct: 71 LAFKGPAPERING 83
BLAST of DW043147 vs. TrEMBL
Match: B2BJD3|B2BJD3_RHOCT (Early light-induced protein 4 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 57.3806 bits (137), Expect = 3.007e-9 Identity = 32/48 (66.67%), Postives = 35/48 (72.92%), Query Frame = 1 Query: 196 TVMQSILVSPATGVAKPARVVG*KPMTPSCYMPRQQRNSSRLVRCMAK 339 +VMQSILVSP TGVAK A + P T CY+PRQ RNS LVRCMAK Sbjct: 5 SVMQSILVSPVTGVAKGAGLSRTIPRT--CYLPRQGRNSGMLVRCMAK 50 HSP 2 Score: 27.7202 bits (60), Expect = 3.007e-9 Identity = 12/18 (66.67%), Postives = 13/18 (72.22%), Query Frame = 2 Query: 398 DFLRNVAFSGPTPERITG 451 DF +AFSGP PERI G Sbjct: 54 DFFDLLAFSGPGPERING 71
BLAST of DW043147 vs. TrEMBL
Match: C9E439|C9E439_CAMSI (Putative early light induced protein 2 OS=Camellia sinensis GN=ELIP2 PE=2 SV=1) HSP 1 Score: 51.6026 bits (122), Expect = 5.455e-7 Identity = 27/53 (50.94%), Postives = 33/53 (62.26%), Query Frame = 1 Query: 202 MQSILVSPATGVAKPARVVG*KPMTPSCYMPRQQRNSSRLVRCMAKYGQKKEV 360 MQS+L P T V AR TP Y+P Q+N+S VRCMAKYGQK++V Sbjct: 7 MQSVLARPVTSVTTRARF---GQFTPCSYVPYLQKNASMQVRCMAKYGQKEDV 56 HSP 2 Score: 25.7942 bits (55), Expect = 5.455e-7 Identity = 10/13 (76.92%), Postives = 11/13 (84.62%), Query Frame = 2 Query: 413 VAFSGPTPERITG 451 +AFSGP PERI G Sbjct: 70 LAFSGPAPERING 82
BLAST of DW043147 vs. TrEMBL
Match: B2BJD6|B2BJD6_RHOCT (Early light-induced protein 7 OS=Rhododendron catawbiense PE=2 SV=1) HSP 1 Score: 48.9062 bits (115), Expect = 9.089e-7 Identity = 32/69 (46.38%), Postives = 44/69 (63.77%), Query Frame = 1 Query: 196 TVMQSILVSPATGVAKPARVVG*KPMTPSC-YMPRQQRNSSRLVRCMAKYGQKKEV------XTPSLVP 381 +VMQSILVSP GVAK +G + P+ +MP Q+R+SS +VRC A+ GQK++ TPS +P Sbjct: 5 SVMQSILVSPVAGVAKG---LGSNRLRPAYRHMPHQRRSSSVVVRCTAENGQKEQAVPAATPSTPSPLP 70 HSP 2 Score: 27.7202 bits (60), Expect = 9.089e-7 Identity = 12/18 (66.67%), Postives = 12/18 (66.67%), Query Frame = 2 Query: 398 DFLRNVAFSGPTPERITG 451 DF AFSGP PERI G Sbjct: 83 DFFDVFAFSGPAPERING 100 The following BLAST results are available for this feature:
BLAST of DW043147 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 8
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >DW043147 ID=DW043147; Name=DW043147; organism=Vaccinium corymbosum; type=EST; length=520bpback to top |