HO054806
EST Overview
Libraries
Unigenes
This EST is part of the following unigenes:
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of HO054806 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0010s13420.1 () HSP 1 Score: 59.6918 bits (143), Expect = 5.094e-10 Identity = 39/89 (43.82%), Postives = 46/89 (51.69%), Query Frame = 1 Query: 37 STAPFLFGSRRLR-KQASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLASRIEGFDCLDRDRRNRTVPALA 300 S PF GS R I +RFGD+ FSP+S RKGG +RA+F RIEGFDCLDRD RN ++PALA Sbjct: 94 SPPPFFCGSPPSRVANPLIQDARFGDEKFSPLS-PVTPIPPTMDLSSSSSSPRKGGLVRANFGNKPVVRIEGFDCLDRDCRNCSIPALA 181
BLAST of HO054806 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0004s09890.1 () HSP 1 Score: 57.7658 bits (138), Expect = 1.936e-9 Identity = 38/90 (42.22%), Postives = 47/90 (52.22%), Query Frame = 1 Query: 37 STAPFLFGSRRLRK-QASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLAS-RIEGFDCLDRDRRNRTVPALA 300 S PF GS R I +RFGDD +P+S ARKGGC R F L A R+EGFDCL+RDR+N ++PA+A Sbjct: 133 SPPPFFCGSPPSRVGNPLIQDARFGDDKLTPMS--PLSIPSPSGLSSPSSSARKGGCARMKFGLKPAMVRVEGFDCLNRDRQNSSIPAVA 220
BLAST of HO054806 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0008s11990.1 () HSP 1 Score: 57.7658 bits (138), Expect = 1.936e-9 Identity = 39/89 (43.82%), Postives = 45/89 (50.56%), Query Frame = 1 Query: 37 STAPFLFGSRRLR-KQASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLASRIEGFDCLDRDRRNRTVPALA 300 S PF GS R I +RFG++ FSP S RKGG +R+SF RIEGFDCLDRD RN +VPALA Sbjct: 94 SPPPFFCGSPPSRVANPLIQDARFGNEKFSPFS-PVTPIPPQMDLSSSSSSPRKGGLVRSSFGSKPVVRIEGFDCLDRDCRNCSVPALA 181
BLAST of HO054806 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s15650.3 () HSP 1 Score: 56.6102 bits (135), Expect = 4.312e-9 Identity = 36/90 (40.00%), Postives = 47/90 (52.22%), Query Frame = 1 Query: 37 STAPFLFGSRRLRK-QASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLAS-RIEGFDCLDRDRRNRTVPALA 300 S PF GS R I +RFGD+ F+PIS + GGC+R F L A R+EGFDCL+RDR+N ++PA+A Sbjct: 43 SPPPFFCGSPPTRVGNPLIQDARFGDEKFTPIS-PLSIPSPSGLSSPSTSACKGGGCVRMKFGLKPAEVRVEGFDCLNRDRQNSSIPAVA 131
BLAST of HO054806 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s15650.2 () HSP 1 Score: 56.6102 bits (135), Expect = 4.312e-9 Identity = 36/90 (40.00%), Postives = 47/90 (52.22%), Query Frame = 1 Query: 37 STAPFLFGSRRLRK-QASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLAS-RIEGFDCLDRDRRNRTVPALA 300 S PF GS R I +RFGD+ F+PIS + GGC+R F L A R+EGFDCL+RDR+N ++PA+A Sbjct: 90 SPPPFFCGSPPTRVGNPLIQDARFGDEKFTPIS-PLSIPSPSGLSSPSTSACKGGGCVRMKFGLKPAEVRVEGFDCLNRDRQNSSIPAVA 178
BLAST of HO054806 vs. Populus trichocarpa peptide v2.0
Match: POPTR_0005s15650.1 () HSP 1 Score: 56.6102 bits (135), Expect = 4.312e-9 Identity = 36/90 (40.00%), Postives = 47/90 (52.22%), Query Frame = 1 Query: 37 STAPFLFGSRRLRK-QASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLAS-RIEGFDCLDRDRRNRTVPALA 300 S PF GS R I +RFGD+ F+PIS + GGC+R F L A R+EGFDCL+RDR+N ++PA+A Sbjct: 90 SPPPFFCGSPPTRVGNPLIQDARFGDEKFTPIS-PLSIPSPSGLSSPSTSACKGGGCVRMKFGLKPAEVRVEGFDCLNRDRQNSSIPAVA 178
BLAST of HO054806 vs. P. persica 1.0 peptide
Match: ppa012271m () HSP 1 Score: 60.4622 bits (145), Expect = 1.983e-10 Identity = 38/89 (42.70%), Postives = 45/89 (50.56%), Query Frame = 1 Query: 37 STAPFLFGSRRLR-KQASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLASRIEGFDCLDRDRRNRTVPALA 300 S PF GS R I +RFGD+ +P S ARKG +RASF A R+EGFDCLDRDRRN ++P LA Sbjct: 89 SPHPFFSGSPPSRVANPLIQDARFGDEKLTPSSPLSPTPHPSGLSSSPTTSARKGSFVRASFGSKPAVRVEGFDCLDRDRRNCSIPTLA 177
BLAST of HO054806 vs. P. persica 1.0 peptide
Match: ppa012316m () HSP 1 Score: 56.6102 bits (135), Expect = 2.864e-9 Identity = 36/89 (40.45%), Postives = 46/89 (51.69%), Query Frame = 1 Query: 37 STAPFLFGSRRLR-KQASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLASRIEGFDCLDRDRRNRTVPALA 300 S PF GS R I +RFG++ +P+S RKGG +RA+F A R+EGFDCLDRDRRN ++P LA Sbjct: 89 SQHPFYSGSPPSRVANPLIQDARFGNEKLTPLS---PIPAPSGLSSSPSSSTRKGGFVRANFGSKPAVRVEGFDCLDRDRRNCSIPTLA 174
BLAST of HO054806 vs. P. persica 1.0 peptide
Match: ppa012335m () HSP 1 Score: 56.225 bits (134), Expect = 3.740e-9 Identity = 34/90 (37.78%), Postives = 48/90 (53.33%), Query Frame = 1 Query: 37 STAPFLFGSRRLR-KQASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLAS-RIEGFDCLDRDRRNRTVPALA 300 S+ P+ GS R I +RFGD+ F+P+S RK GC+R + L A+ R+EGFDCL+RDR+N ++PA A Sbjct: 92 SSPPYFCGSPPSRASNPLIQDARFGDEKFTPVSASPSPSTLSSP--------RKAGCVRMKYGLKPAAVRVEGFDCLNRDRQNSSIPAFA 173
BLAST of HO054806 vs. TrEMBL
Match: C6T416|C6T416_SOYBN (Putative uncharacterized protein OS=Glycine max PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 1.639e-11 Identity = 44/92 (47.83%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 37 STAPFLFGSRRLRK-QASISRSRFGDDIFSPIS---FQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLASRIEGFDCLDRDRRNRTVPALA 300 S+ PF GS R I +RFGD+ FSP+S + ARKGGC+RA+F N A RIEGFDCLDRDRRN ++PALA Sbjct: 84 SSPPFFCGSPPSRAANPLIQDARFGDENFSPLSPPSWVVVPATASGLPPSPSSSARKGGCVRANFGNNPAVRIEGFDCLDRDRRNCSIPALA 175
BLAST of HO054806 vs. TrEMBL
Match: D7T944|D7T944_VITVI (Whole genome shotgun sequence of line PN40024, scaffold_11.assembly12x (Fragment) OS=Vitis vinifera GN=VIT_00011892001 PE=4 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 4.770e-11 Identity = 44/89 (49.44%), Postives = 51/89 (57.30%), Query Frame = 1 Query: 37 STAPFLFGSRRLR-KQASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLASRIEGFDCLDRDRRNRTVPALA 300 S+ PF GS R I +RFGD+ +PIS ARKGGCIRA+F N A RIEGFDCLDRDRRN ++PALA Sbjct: 87 SSPPFFSGSPPSRVANPLIQDARFGDEKLNPIS-PPLVSVPSGLSSSPSSSARKGGCIRANFGNNPAVRIEGFDCLDRDRRNCSIPALA 174
BLAST of HO054806 vs. TrEMBL
Match: B7FGX3|B7FGX3_MEDTR (Putative uncharacterized protein OS=Medicago truncatula PE=2 SV=1) HSP 1 Score: 64.6994 bits (156), Expect = 3.419e-9 Identity = 41/89 (46.07%), Postives = 48/89 (53.93%), Query Frame = 1 Query: 37 STAPFLFGSRRLR-KQASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLASRIEGFDCLDRDRRNRTVPALA 300 S PF GS R I +RFGD+ FSP S+ ARKGGC+RA+F N A R+EGFDCLDRD RN + ALA Sbjct: 73 SPPPFFCGSPPSRVANPLIQDARFGDENFSPSSW-VVVPAPSGLPPSPPSSARKGGCVRANFGNNPAVRVEGFDCLDRDSRNCGIAALA 160
BLAST of HO054806 vs. TrEMBL
Match: A8TU70|A8TU70_PAESU (Putative uncharacterized protein OS=Paeonia suffruticosa PE=2 SV=1) HSP 1 Score: 62.003 bits (149), Expect = 2.216e-8 Identity = 38/89 (42.70%), Postives = 48/89 (53.93%), Query Frame = 1 Query: 37 STAPFLFGSRRLR-KQASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLASRIEGFDCLDRDRRNRTVPALA 300 S+ PF GS R + +RFGD+ +P S ARKGGC+RA++ RIEGFDCLDRDRRN ++PALA Sbjct: 96 SSPPFFSGSPPSRVANPVVLDARFGDEKITP-SAPLQPLLSPGPSSSPSSSARKGGCLRANYGSKPVVRIEGFDCLDRDRRNCSIPALA 183
BLAST of HO054806 vs. TrEMBL
Match: B9T053|B9T053_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_0029900 PE=4 SV=1) HSP 1 Score: 61.2326 bits (147), Expect = 3.780e-8 Identity = 39/92 (42.39%), Postives = 48/92 (52.17%), Query Frame = 1 Query: 37 STAPFLFGSRRLR-KQASISRSRFGDDIFSPISF---QXXXXXXXXXXXXXXXXARKGGCIRASFVLNLASRIEGFDCLDRDRRNRTVPALA 300 S PF GS R I +RFG++ SPIS RKGGC+RA+F A R+EGFDCLDRDRR+ ++PALA Sbjct: 98 SPPPFFCGSPPSRVANPLIQDARFGEEELSPISPLMPMPIQPPSSSSSSSPTSSGRKGGCVRANFGNKPAVRVEGFDCLDRDRRSCSIPALA 189
BLAST of HO054806 vs. TrEMBL
Match: B9HWH3|B9HWH3_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_566618 PE=4 SV=1) HSP 1 Score: 59.6918 bits (143), Expect = 1.100e-7 Identity = 39/89 (43.82%), Postives = 46/89 (51.69%), Query Frame = 1 Query: 37 STAPFLFGSRRLR-KQASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLASRIEGFDCLDRDRRNRTVPALA 300 S PF GS R I +RFGD+ FSP+S RKGG +RA+F RIEGFDCLDRD RN ++PALA Sbjct: 94 SPPPFFCGSPPSRVANPLIQDARFGDEKFSPLS-PVTPIPPTMDLSSSSSSPRKGGLVRANFGNKPVVRIEGFDCLDRDCRNCSIPALA 181
BLAST of HO054806 vs. TrEMBL
Match: Q1KUV3|Q1KUV3_9ROSI (Putative uncharacterized protein OS=Cleome spinosa PE=4 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.436e-7 Identity = 36/90 (40.00%), Postives = 48/90 (53.33%), Query Frame = 1 Query: 37 STAPFLFGSRRLR-KQASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLAS-RIEGFDCLDRDRRNRTVPALA 300 S+ PF GS R + +RFGD+ +PIS KGGC+R F L A+ R+EGFDCLDRDR+N ++PA+A Sbjct: 112 SSPPFFCGSPPSRASNPQVQDARFGDEKLNPISPSPLSAGFPSPTSVVAPRG-KGGCVRMKFGLKPAAVRVEGFDCLDRDRQNSSIPAMA 200
BLAST of HO054806 vs. TrEMBL
Match: A5Z1Q1|A5Z1Q1_PAESU (Putative uncharacterized protein (Fragment) OS=Paeonia suffruticosa PE=2 SV=1) HSP 1 Score: 59.3066 bits (142), Expect = 1.436e-7 Identity = 32/68 (47.06%), Postives = 40/68 (58.82%), Query Frame = 1 Query: 97 SRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLASRIEGFDCLDRDRRNRTVPALA 300 +RFGD+ +P S ARKGGC+RA++ RIEGFDCLDRDRRN ++PALA Sbjct: 9 ARFGDEKITP-SAPLQPLLSPGPSSSPSSSARKGGCLRANYGSKPVVRIEGFDCLDRDRRNCSIPALA 75
BLAST of HO054806 vs. TrEMBL
Match: B9S5F6|B9S5F6_RICCO (Putative uncharacterized protein OS=Ricinus communis GN=RCOM_1571370 PE=4 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 4.179e-7 Identity = 35/90 (38.89%), Postives = 50/90 (55.56%), Query Frame = 1 Query: 37 STAPFLFGSRRLRK-QASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLAS-RIEGFDCLDRDRRNRTVPALA 300 S+ PF GS R I +RFGD+ +PI +RKGGC+R ++ L A+ R+EGFDCL+RDR+N ++PA+A Sbjct: 88 SSPPFFSGSPPTRATNPLIQDARFGDEKLTPIP--PLSIPTPSGLSSPTPSSRKGGCVRMNYGLKPAAVRVEGFDCLNRDRQNSSIPAMA 175
BLAST of HO054806 vs. TrEMBL
Match: B9HJ32|B9HJ32_POPTR (Predicted protein OS=Populus trichocarpa GN=POPTRDRAFT_820632 PE=4 SV=1) HSP 1 Score: 57.7658 bits (138), Expect = 4.179e-7 Identity = 39/89 (43.82%), Postives = 45/89 (50.56%), Query Frame = 1 Query: 37 STAPFLFGSRRLR-KQASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLASRIEGFDCLDRDRRNRTVPALA 300 S PF GS R I +RFG++ FSP S RKGG +R+SF RIEGFDCLDRD RN +VPALA Sbjct: 94 SPPPFFCGSPPSRVANPLIQDARFGNEKFSPFS-PVTPIPPQMDLSSSSSSPRKGGLVRSSFGSKPVVRIEGFDCLDRDCRNCSVPALA 181
BLAST of HO054806 vs. Vitis vinifera peptide
Match: GSVIVT01011892001 (assembled CDS) HSP 1 Score: 70.8626 bits (172), Expect = 1.288e-13 Identity = 44/89 (49.44%), Postives = 51/89 (57.30%), Query Frame = 1 Query: 37 STAPFLFGSRRLR-KQASISRSRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCIRASFVLNLASRIEGFDCLDRDRRNRTVPALA 300 S+ PF GS R I +RFGD+ +PIS ARKGGCIRA+F N A RIEGFDCLDRDRRN ++PALA Sbjct: 87 SSPPFFSGSPPSRVANPLIQDARFGDEKLNPIS-PPLVSVPSGLSSSPSSSARKGGCIRANFGNNPAVRIEGFDCLDRDRRNCSIPALA 174
BLAST of HO054806 vs. Vitis vinifera peptide
Match: GSVIVT01031028001 (assembled CDS) HSP 1 Score: 48.9062 bits (115), Expect = 5.239e-7 Identity = 22/39 (56.41%), Postives = 30/39 (76.92%), Query Frame = 1 Query: 187 ARKGGCIRASFVLNLAS-RIEGFDCLDRDRRNRTVPALA 300 ARKGGC+R A+ R+EGFDCL+RDR+N ++PA+A Sbjct: 141 ARKGGCVRMKVGFKPAAVRVEGFDCLNRDRQNSSIPAVA 179
BLAST of HO054806 vs. TAIR peptide
Match: AT1G68490.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G13390.2); Has 125 Blast hits to 125 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 125; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr1:25693926-25694946 FORWARD LENGTH=183) HSP 1 Score: 55.8398 bits (133), Expect = 6.148e-9 Identity = 36/90 (40.00%), Postives = 48/90 (53.33%), Query Frame = 1 Query: 37 STAPFLFGSRRLRKQASISR-SRFGDDIFSPISFQXXXXXXXXXXXXXXXXARKGGCI-RASFVLNLASRIEGFDCLDRDRRNRTVPALA 300 S +PFL GS R +++ +RF D+I S S RKGGC+ R +F + R+EGFDCLDRD RN ++PALA Sbjct: 94 SPSPFLCGSPPSRVANPLTQDARFRDEIVSVSSVIPPQLGLPPSSSPSSSSGRKGGCVVRGNFGNSPKVRVEGFDCLDRDSRNCSIPALA 183
BLAST of HO054806 vs. TAIR peptide
Match: AT5G16110.1 (| Symbols: | unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G02555.1); Has 133 Blast hits to 133 proteins in 18 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 133; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | chr5:5261171-5262668 REVERSE LENGTH=244) HSP 1 Score: 50.447 bits (119), Expect = 2.583e-7 Identity = 33/95 (34.74%), Postives = 49/95 (51.58%), Query Frame = 1 Query: 37 STAPFLFGSRRLRKQASISR-SRFGDDIFSPIS-----FQXXXXXXXXXXXXXXXXARKGGCIRASFVLNL-ASRIEGFDCLDRDRRNRTVPALA 300 S+ P+ GS R +++ +RF D+ +PIS Q + GC+R F LN A R+EGFDCL+RDR+N ++PA+A Sbjct: 150 SSPPYFPGSPPSRAANPLAQDARFRDEKLNPISPNSPFLQPYSATGFPSPSSSSSSSSSRGCVRMKFGLNSPAVRVEGFDCLNRDRQNSSIPAMA 244 The following BLAST results are available for this feature:
BLAST of HO054806 vs. Populus trichocarpa peptide v2.0
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Populus trichocarpa v2.0 peptide) Total hits: 6
BLAST of HO054806 vs. P. persica 1.0 peptide
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs Ppersica v1.0 peptide) Total hits: 3
BLAST of HO054806 vs. TrEMBL
Analysis Date: 2011-01-18 (BLAST: Vaccinium corymbosum unigene v1 vs TrEMBL) Total hits: 10
BLAST of HO054806 vs. Vitis vinifera peptide
Analysis Date: 2011-01-25 (BLAST: Vaccinium corymbosum unigene v1 vs Vitis vinifera peptide) Total hits: 2
BLAST of HO054806 vs. TAIR peptide
Analysis Date: 2011-02-10 (BLAST: Vaccinium corymbosum unigene v1 vs TAIR 10 peptide) Total hits: 2
InterPro
Analysis Name: InterProScan analysis for Vaccinium corymbosum unigene v1
Date Performed: 2011-01-18
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >HO054806 ID=HO054806; Name=HO054806; organism=Vaccinium corymbosum; type=EST; length=345bpback to top Annotated Terms
The
following terms have been associated with
this EST:
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