SCF116485, SCF116485 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF116485
Genbank ID	KP278834
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(CAT)7
Primer 1	SCF116485.forward primer: CAATATAAACGTCAGTCACCAG
Primer 2	SCF116485.reverse primer: ACTTTTGGTTATGCTGGAAG
Max Length	232
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278834

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG12	N/A	73.23	SCF116485	View
2	Cranberry-Crimson_Queen-2007	LG12	N/A	63.7	SCF116485	View
3	Cranberry-Mullica_Queen-2007	LG12	N/A	89	SCF116485	View
4	Cranberry-Mullica_Queen_2-F1	LG12	N/A	0	SCF116485	View
5	Cranberry-CNJ02-1-2017	LG12	N/A	61.7	SCF116485	View
6	Cranberry-Crimson_Queen-2017	LG12	N/A	54.9	SCF116485	View
7	Cranberry-Mullica_Queen-2017	LG12	N/A	67.4	SCF116485	View
8	Cranberry-Composite_map-F1	LG12	N/A	8.25	SCF116485	View
9	Cranberry-Crimson_Queen-F1	LG12	N/A	3.57	SCF116485	View
10	Cranberry-Mullica_Queen_1-F1	LG12	N/A	5.96	SCF116485	View

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr12	supercontig	Vmac_chr12:1187013..1187216 .
chr12	supercontig	chr12:3113187..3113396 .