SCF25944, SCF25944 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF25944
Genbank ID	KP278666
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(GA)10
Primer 1	SCF25944.forward primer: AACTATGCCAGAAGACTCAGAT
Primer 2	SCF25944.reverse primer: CTTCACAAATCACAACCACTAC
Max Length	321
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278666

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG7	N/A	83.94	SCF25944	View
2	Cranberry-Crimson_Queen-2007	LG7	N/A	73.9	SCF25944	View
3	Cranberry-Mullica_Queen-2007	LG7	N/A	97.1	SCF25944	View
4	Cranberry-CNJ02-1-2017	LG07	N/A	78	SCF25944	View
5	Cranberry-Crimson_Queen-2017	LG07	N/A	70.1	SCF25944	View
6	Cranberry-Mullica_Queen-2017	LG07	N/A	89.3	SCF25944	View
7	Cranberry-Composite_map-F1	LG07	N/A	11.64	SCF25944	View
8	Cranberry-Crimson_Queen-F1	LG07	N/A	14.32	SCF25944	View
9	Cranberry-Mullica_Queen_1-F1	LG07	N/A	15.56	SCF25944	View

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr07	supercontig	Vmac_chr07:5199131..5199410 .
chr7	supercontig	chr7:4790226..4790509 .