SCF3914, SCF3914 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF3914
Genbank ID	KP278609
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(TAC)13
Primer 1	SCF3914.forward primer: TGTGGAGTTAGAGTGACATACC
Primer 2	SCF3914.reverse primer: GACAAGAATGATGAGTAGCGT
Max Length	372
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278609

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-[BGx(BLxNL)]95_x_ GH1x35-F1	LG1	N/A	95.59	SCF3914	View
2	Cranberry-CNJ02-1-2007	LG1	N/A	77.99	SCF3914	View
3	Cranberry-Crimson_Queen-2007	LG1	N/A	66.9	SCF3914	View
4	Cranberry-Mullica_Queen-2007	LG1	N/A	89.2	SCF3914	View
5	Cranberry-CNJ02-1-2017	LG01	N/A	73.5	SCF3914	View
6	Cranberry-Crimson_Queen-2017	LG01	N/A	63.3	SCF3914	View
7	Cranberry-Mullica_Queen-2017	LG01	N/A	85.3	SCF3914	View
8	Cranberry-[BG//BL/BN]95-F1	LG01	N/A	36.45	SCF3914	View
9	Cranberry-Composite_map-F1	LG01	N/A	31.68	SCF3914	View
10	Cranberry-Crimson_Queen-F1	LG01	N/A	13.11	SCF3914	View
11	Cranberry-Mullica_Queen_1-F1	LG01	N/A	13.71	SCF3914	View

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr01	supercontig	Vmac_chr01:18656389..18656715 .
chr1	supercontig	chr1:26466504..26466832 .