SCF6530, SCF6530 (genetic_marker) Vaccinium macrocarpon | GDV

Marker Overview

Marker Overview


Name	SCF6530
Genbank ID	KP278614
Type	SSR
Species	Vaccinium macrocarpon
Repeat Motif	(CT)9
Primer 1	SCF6530.forward primer: CCCCAAGTATAATGTGTAAAGG
Primer 2	SCF6530.reverse primer: AGTTCGCATAGAAACTGTAGGA
Max Length	353
Publication	[view all]

References

External references for this genetic_marker


Database	Accession
DB:genbank	KP278614

Publications


Year	Publication
2015	Schlautman B, Fajardo D, Bougie T, Wiesman E, Polashock J, Vorsa N, Steffan S, Zalapa J. Development and validation of 697 novel polymorphic genomic and EST-SSR markers in the American cranberry (Vaccinium macrocarpon Ait.). Molecules (Basel, Switzerland). 2015; 20(2):2001-13.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Cranberry-CNJ02-1-2007	LG4	N/A	40.58	SCF6530	View
2	Cranberry-Crimson_Queen-2007	LG4	N/A	36.7	SCF6530	View
3	Cranberry-Mullica_Queen-2007	LG4	N/A	45.9	SCF6530	View
4	Cranberry-CNJ02-1-2017	LG04	N/A	46.5	SCF6530	View
5	Cranberry-Crimson_Queen-2017	LG04	N/A	11.9	SCF6530	View
6	Cranberry-Mullica_Queen-2017	LG04	N/A	49.5	SCF6530	View
7	Cranberry-Composite_map-F1	LG04	N/A	26.79	SCF6530	View
8	Cranberry-Crimson_Queen-F1	LG04	N/A	31.55	SCF6530	View
9	Cranberry-Mullica_Queen_1-F1	LG04	N/A	48.33	SCF6530	View

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vmac_chr04	supercontig	Vmac_chr04:12617313..12617633 .
chr4	supercontig	chr4:23303211..23303534 .