KAN430, KAN430 (genetic_marker) Vaccinium corymbosum | GDV

Marker Overview

Marker Overview


Name	KAN430
Genbank ID	N/A
Type	SSR
Species	Vaccinium corymbosum
Primer 1	KAN430.Forward Primer: ATACGAAAACCAATCGACGC
Primer 2	KAN430.Reverse Primer: TCTTTCTCTTTGCCTCCAGC
Publication	[view all]

Alignments

The following features are aligned


Feature Name	Type	Location	Analysis	Reference
Vcev1_p0.Chr05	supercontig	Vcev1_p0.Chr05:9343697..9343816 .	Vaccinium caesariense clone W85-20 P0 v2.0 genome sequence	GDV marker alignment to genome using primer sequences
VaccDscaff31	supercontig	VaccDscaff31:28355553..28355672 .	Vaccinium corymbosum cv. Draper v1.0 genome sequence	GDV marker alignment to genome using primer sequences
scaffold01158	supercontig	scaffold01158:22715..22834 .	Vaccinium corymbosum W8520 draft genome sequence	GDV marker alignment to genome using primer sequences

Publications


Year	Publication
2016	McCallum S, Graham J, Jorgensen L, Rowland L, Bassil N, Hancock J, Wheeler E, Vining K, Poland J, Olmstead J, Buck E, Wiedow C, Jaclson E, Allan B, Hackett C. Construction of a SNP and SSR linkage map in autotetraploid blueberry using genotyping by sequencing. Molecular Breeding. 2016; 36(41):1-24.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Blueberry-Draper	LG1	N/A	26	KAN-430	View