MAH1-00236-2 | GDV

Marker Overview

Marker Overview


Name	MAH1-00236-2
Genbank ID	N/A
Type	SSR
Species	Vaccinium sp.
Primer 1	MAH1-00236-2.Forward: CTCTTCTCCCCCTTTCATACCT
Primer 2	MAH1-00236-2.Reverse: CTTCCTGGTGAAGAGAAATTGG
Publication	[view all]
Contact	Brandon Schlautman

Contact

Name

Details

Brandon Schlautman

First name:	Brandon
Last name:	Schlautman
Institution:	Department of Horticulture, University of Wisconsin-Madison
Address:	Department of Horticulture, University of Wisconsin-Madison, 1575 Linden Dr. Madison, WI 53706, USA
Country:	USA
Email:	schlautman@wisc.edu
Last update:	Apr 2017

Publications


Year	Publication
2018	Schlautman B, Diaz-Garcia L, Covarrubias-Pazaran G, Schlautman N, Vorsa N, Polashock J, Ogden E, Brown A, Lin Y, Bassil N, Buck E, Wiedow C, McCallum S, Graham J, Iorizzo M, Rowland L, Zalapa J. Comparative genetic mapping reveals synteny and collinearity between the American cranberry and diploid blueberry genomes. Molecular breeding. 2018; 38(1):9.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Blueberry-F1#10_x_W85-23-F1-2017	LG01	N/A	80.1	MAH1-00236-2	View
2	Blueberry-F1#10-2017	LG01	N/A	83.7	MAH1-00236-2	View

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
scaffold00236	supercontig	scaffold00236:230749..230973 .
chr2_H1	supercontig	chr2_H1:28344507..28344706 .
Vmac_chr01	supercontig	Vmac_chr01:25481577..25481823 .
chr1	supercontig	chr1:23868396..23868618 .
Chr02_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr02_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:29132273..29132464 .
Chr02_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr02_Vaccinium_vitis-idaea_ssp_minus:27810818..27811017 .