scaf00033 | GDV

Marker Overview

Marker Overview


Name	scaf00033
Genbank ID	N/A
Type	SSR
Species	Vaccinium sp.
Primer 1	scaf00033.Forward: TATGATCTCGTTTCGTGCTGAC
Primer 2	scaf00033.Reverse: ACTCTAGCCAGAGAACGCAAAA
Publication	[view all]
Contact	Brandon Schlautman

Contact

Name

Details

Brandon Schlautman

First name:	Brandon
Last name:	Schlautman
Institution:	Department of Horticulture, University of Wisconsin-Madison
Address:	Department of Horticulture, University of Wisconsin-Madison, 1575 Linden Dr. Madison, WI 53706, USA
Country:	USA
Email:	schlautman@wisc.edu
Last update:	Apr 2017

Publications


Year	Publication
2018	Schlautman B, Diaz-Garcia L, Covarrubias-Pazaran G, Schlautman N, Vorsa N, Polashock J, Ogden E, Brown A, Lin Y, Bassil N, Buck E, Wiedow C, McCallum S, Graham J, Iorizzo M, Rowland L, Zalapa J. Comparative genetic mapping reveals synteny and collinearity between the American cranberry and diploid blueberry genomes. Molecular breeding. 2018; 38(1):9.

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr12	supercontig	Vcev1_p0.Chr12:1549404..1549659 .
VaccDscaff22	supercontig	VaccDscaff22:1483802..1484060 .
scaffold00033	supercontig	scaffold00033:5962..6217 .
chr12_H1	supercontig	chr12_H1:1823500..1823755 .
Chr12_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1	chromosome	Chr12_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:1421662..1421960 .
Chr12_Vaccinium_vitis-idaea_ssp_minus	chromosome	Chr12_Vaccinium_vitis-idaea_ssp_minus:913438..913651 .