scaf00169 | GDV

Marker Overview

Marker Overview


Name	scaf00169
Genbank ID	N/A
Type	SSR
Species	Vaccinium sp.
Primer 1	scaf00169.Forward: TGAGTAGGGCCAATATGATGTG
Primer 2	scaf00169.Reverse: TGGTCATACGACTTTCAAGGTG
Publication	[view all]
Contact	Brandon Schlautman

Contact

Name

Details

Brandon Schlautman

First name:	Brandon
Last name:	Schlautman
Institution:	Department of Horticulture, University of Wisconsin-Madison
Address:	Department of Horticulture, University of Wisconsin-Madison, 1575 Linden Dr. Madison, WI 53706, USA
Country:	USA
Email:	schlautman@wisc.edu
Last update:	Apr 2017

Publications


Year	Publication
2018	Schlautman B, Diaz-Garcia L, Covarrubias-Pazaran G, Schlautman N, Vorsa N, Polashock J, Ogden E, Brown A, Lin Y, Bassil N, Buck E, Wiedow C, McCallum S, Graham J, Iorizzo M, Rowland L, Zalapa J. Comparative genetic mapping reveals synteny and collinearity between the American cranberry and diploid blueberry genomes. Molecular breeding. 2018; 38(1):9.

Map Positions


#	Map Name	Linkage Group	Bin	Position	Locus	MapViewer
1	Blueberry-F1#10_x_W85-23-F1-2017	LG12	N/A	2.2	scaf00169	View
2	Blueberry-F1#10-2017	LG12	N/A	0	scaf00169	View
3	Blueberry-W85-23-2017	LG12	N/A	1.2	scaf00169	View

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
Vcev1_p0.Chr05	supercontig	Vcev1_p0.Chr05:59421616..59421877 .
scaffold00169	supercontig	scaffold00169:21648..21909 .
chr5_H1	supercontig	chr5_H1:48917349..48917594 .
Vmac_chr12	supercontig	Vmac_chr12:38598233..38598483 .
chr12	supercontig	chr12:37640574..37640824 .