GVC-C547

Marker Overview
NameGVC-C547
Genbank IDN/A
TypeSSR
SpeciesVaccinium sp.
Primer 1GVC-C547.Forward: GATGAAGGACGCTATCGAGG
Primer 2GVC-C547.Reverse: TCTAGATCCACCATCCCTGC
Publication[view all]
ContactBrandon Schlautman
Contact
NameDetails
Brandon Schlautman
First name:Brandon
Last name:Schlautman
Institution:Department of Horticulture, University of Wisconsin-Madison
Address:Department of Horticulture, University of Wisconsin-Madison, 1575 Linden Dr. Madison, WI 53706, USA
Country:USA
Email:schlautman@wisc.edu
Last update:Apr 2017
Alignments
The following features are aligned
Feature Name Type LocationAnalysisReference
Vcev1_p0.Chr08supercontigVcev1_p0.Chr08:39404142..39404409 .Vaccinium caesariense clone W85-20 P0 v2.0 genome sequenceGDV marker alignment to genome using primer sequences
VaccDscaff30supercontigVaccDscaff30:12768802..12769069 .Vaccinium corymbosum cv. Draper v1.0 genome sequenceGDV marker alignment to genome using primer sequences
scaffold00907supercontigscaffold00907:33463..33730 .Vaccinium corymbosum W8520 draft genome sequenceGDV marker alignment to genome using primer sequences
chr8_H1supercontigchr8_H1:30642825..30643092 .Vaccinium darrowii clone NJ8810/NJ8807 v1.2 genome sequenceGDV marker alignment to genome using primer sequences
Vmac_chr03supercontigVmac_chr03:29224278..29224548 .Vaccinium macrocarpon cv. Ben Lear v1.0 genome sequenceGDV marker alignment to genome using primer sequences
chr3supercontigchr3:28227843..28228113 .Vaccinium macrocarpon cv. Stevens v1.0 genome sequenceGDV marker alignment to genome using primer sequences
Chr08supercontigChr08:27289677..27289956 .Vaccinium myrtillus isolate NK2018 v1.0 genome sequenceGDV marker alignment to genome using primer sequences
Chr08_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1chromosomeChr08_Vaccinium_vitis-idaea_var_RedCandy_RedCandy_UBC_v1:31080005..31080275 .Vaccinium vitis-idaea ssp. vitis-idaea cv. Red Candy v1.0 genomeGDV marker alignment to genome using primer sequences
Chr08_Vaccinium_vitis-idaea_ssp_minuschromosomeChr08_Vaccinium_vitis-idaea_ssp_minus:29889016..29889286 .Vaccinium vitis-idaea ssp. minus v1.0 genomeGDV marker alignment to genome using primer sequences
Map Positions
#Map NameLinkage GroupBinPositionLocusMapViewer
1Blueberry-F1#10_x_W85-23-F1-2017LG03N/A59.9GVC-C547View
2Blueberry-W85-23-2017LG03N/A58.8GVC-C547View